Table V. Summary of sequences found at subdominant HLA-B*27–restricted epitopes in p17, gp41, and nef (derived from bulk sequence data)
IDp17 (aa 19–27)
IRLRPGGKKgp41 (aa 786–795)
GRRGWEALKYNef (aa 105–114)
RRQDILDLWI
LT1N/A------V-------------
LT2----------------------E-----V
LT3---------------T------E-----V
LT4----------Q--------N/A
LT5-----------------------------
LT6---------------I---N/A
LT7---------------P------E------
LT8-----------------------------
LT9---------------V----G-------V
LT10---------------V------------V
LT11N/A-H----V---N/A
LT12----------------------------V
LT13----------------------E------
LT14----------------------------V
LT15---------------L------------V
LT16---------N/A---------V
LT17---------------I------------V
LT18----------H----V----E-------V
LT19----------------------------V
  • N/A, not able to amplify.