Table I.

Overview of peptides eluted from HLA-DQ2a

Peptide SourceSequenceLength Variants
ActinKEITALAPSTMKIK3
α tubulinAPVISAEKAYHEQ2
α tubulinDYEEVGADSADGEDEG1
β2-microglobulinHPSDIEVDLLKN2
β tubulinDATAEEEEDFGEEAEEE4
β tubulinDPTGTYHGDSDLQLDR2
β-actinEEEIAALVVDN4
β-actinYVALDFEQEMA3
β-actinVPIYEGYALPHAI1
Calcium-binding protein (stromal cell-derived factor 4)DGIVTAEELESYMDP3
CalmodulinLQDMINEVDADGN4
CD20IEIIPIQEEEEE15
CD20IKEEVVGLTETSSQPK1
CD74MRMATPLLMQALPM22
Desmocollin type 4ADGYSADLPLPLPIR2
Endoplasmin precursorESDDEAAVEEEEEEK1
Eukaryotic translation initiation factor 4ADIETFYNTTVEEMP1
Glyceraldehyde 3-phosphate dehydrogenaseGKVDIVAINDPFID2
Glyceraldehyde 3-phosphate dehydrogenaseDIQVVAINDPFID1
Golgi phosphoproteinEFEEAEQVREENLPDE1
Golgi-localized phosphoprotein 130 kDaVDEQYQEEAEEEVQED1
GP73 Golgi phosphoprotein 2AALSVSQENPEMEGPE2
Heat shock cognate 71-kDa proteinFDVSILTIEDGIFE1
Heparan sulphate 2 sulphotransferaseGPRQDATLDEEEDM5
HLA DM α-chainADWAQEQGDAPAILFDK2
HSP-90DPTADDTSAAVTEEMPP2
HSP-90IDEDEVAAEEPN3
HSP-70KSINPDEAVAYG1
HSP-70TPSYVAFTDTERLIG2
Hyaluronan-binding proteinYPEDEVGQEDEAESD1
Hypoxanthine-guanine phosphoribosyltransferaseSPGVVISDDEPGYD2
Ig κ-chain V-III region POMTLTISSLQSEDFAV1
IgE FcR 2NLNGLQADLSSFK7
IgGYPSDIAVEWESNGQPE1
IgGFTLTISSLQSEDF1
Importin β-1 subunitEAADVADDQEEPAT1
Initiation factor 4A-IGPDGMEPEGVIESNWNEIV1
Integral membrane protein 2ADSDPAAIIHDFE1
Integrin β1DDLENVKSLGTDLMNEM1
IFN-γ receptor αAPTSFGYDKPHVLVDL1
IL-21 receptorGSPLAGLDMDTFDSG1
IL-2 receptor β-chain precursorSPFPSSSFSPGGLAPEISPLE1
IL-4 receptor α chain precursorAPVECEEEEEVEEE1
ITM2AREDLVAVEEIRD1
ITM2C proteinLPQTYIIQEEMV1
LckBP1 p75; HCLS1; HS1DEPEGDYEEVLEPE1
LDL receptorDIQAPDGLAVDWIHSN1
LegumainDYTGEDVTPQN5
LegumainGDAEAVKGIGSGKVL1
Low-affinity Igε FcRISQELEELRAEQQR1
Major vault proteinGDKVVAGDEWLFEGPG2
Mannose-6-phosphate receptorVPAAYRGVGDDQLGE2
MAPK-activating proteinSDTEVYGEFYPVPPP2
MHC IAPWIEQEGPEYWDQ28
MHC IAPWVEQEGPEYWDR7
MHC IDTQFVRFDSDAASQ16
MHC IGKDYIALNEDLRS9
MHC ITAADTAAQITQ11
MHC IEPAADLIDMGPDPA5
MHC IFISVGYVDDTQFV7
MHC ILTWKRDGEDQTQD9
MHC IIAEYWNSQKDLLEQKR6
MHC IIDVGEFRAVTELGRPD4
MHC IISDVGEYRAVTELG2
MHC IIFDFDGDEIFH13
MHC IINPDQSGEFMFDFDGDEFFH2
MHC IIGKPVTTGVSETVFLPR1
MHC IIGPSGQYTHEFD1
MHC IIDPLKVYPPLKGSFPENLRHL1
MHC IIDQEETAGVVSTPLIR1
Microsomal stress 70 protein ATPase coreDVYVGYESVELADSNPQ1
(Table continues)