Table II. The interactions between the SVCV-FAN9 peptide and the peptide-binding groove of p/Ctid-UAA
Hydrogen Bonds and Salt BridgesVan der Waals’ Forces
CP3 PeptideH Chain
ResidueAtomResidueAtom
P1-FNY167OHL5, Y57, R60, Q61, V64, Y78, Y155, W163, Y167 (133)
NY7OH
OY155OH
P2-ANQ61OE1Y7, Y9, Q61, V64, Y96, Y155 (62)
P3-NNY9OHY9, V64, Y96, Y110, Q151, N152, Y155 (78)
ND2Y110OH
P4-FV64, Q151, T159 (15)
P5-CY110, Q151, N152 (19)
P6-LY9, V64, A68, V71, F72 (28)
P7-MV71, S75, W143, L146, V148 (29)
P8-MOK142NZV71, D74, S75, L78, K142, W143 (44)
OW143NE1
P9-INS75OGS75, I78, V79, R82, W92, F119, K142, W143(106)
OT139OG1
OXTK142NZ(S)