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Department of Immunology, The Scripps Research Institute, La Jolla, CA 92037
| Abstract |
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| Introduction |
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Depending on the activation status of the Ag-presenting DCs, T cell activation may result in either tolerance or immunity (8, 9, 10). In the absence of inflammatory signals, T cell activation by quiescent DCs results in tolerance of the cross-presented Ag through deletion and anergy. This process is critical to achieve full self-tolerance to Ags that are expressed by parenchymal tissue in periphery and to innocuous environmental Ags. Recent advances in our understanding of normal mechanisms of peripheral tolerance have resulted in the development of tolerance protocols that rely on the capacity of DCs to acquire, process, and cross-present Ag in a tolerogenic form (11, 12, 13). These observations have led to the development of techniques that promote tolerance through delivery of Ag to quiescent DCs. For example, spleen cells can be loaded with protein Ag in vitro and forced to undergo apoptosis by incubation under hypotonic conditions. Upon injection in vivo, the dying cells are taken up by DCs that cross-present the Ags to cognate T cells, thereby resulting in deletion of the Ag-specific T cell (13). As an alternative strategy, Ag can be specifically targeted to DCs for cross-presentation by using a mAb specific for the DC surface molecule, DEC-205 (11, 12). These studies have highlighted the importance of targeting the cross-presentation pathways as a way of inducing tolerance in an Ag-specific manner. Potentially, this can be a very useful therapy for treatment of T cell-mediated autoimmune diseases.
It has proven inefficient to introduce nominal Ag into the cross-presentation pathway. This may reflect the fact that nominal peptides, which are 8–11 residues in length, are readily degraded by peptidases in the cytosol (14, 15, 16, 17). Introducing specific epitopes into the cross-presentation pathway generally has been achieved by starting with the intact protein or large polypeptides that contains the epitope under investigation (17, 18, 19). This strategy relies upon the availability of large quantities of the protein containing the nominal epitope. We wished to use this technique to study in vivo tolerance to a Kd class I-restricted epitope from the transmembrane region of the influenza hemagglutinin (HA). However, the large quantities of the protein required for these studies would be difficult to produce. We report the development of a simple but potent method that allows efficient targeting of defined CD8 T cell epitopes to the cross-presentation pathway for CD8 stimulation in vivo. Depending on the context of Ag cross-presentation, this method may also be used to enhance CD8 T cell immunity and thus may be useful for development of vaccines against infectious diseases or malignancies, or to promote immune tolerance.
| Materials and Methods |
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BALB/c mice, B6 mice, and NOD mice were purchased from The Jackson Laboratory or the Animal Breeding Facility at The Scripps Research Institute (La Jolla, CA) and housed under specific pathogen-free conditions. BALB/c or B6 background β2-microglobulin (β2M)-deficient mice (β2M KO) and Tap1-deficient mice (TAP–/–) were purchased from The Jackson Laboratory and maintained under sterile conditions at the Animal Breeding Facility at The Scripps Research Institute. Clone 4 TCR transgenic mice and OT-I TCR transgenic mice were housed under specific pathogen-free conditions. Experimental procedures were performed according to the National Institutes of Health Guide for the Care and Use of Laboratory Animals.
Virus and infection
Influenza virus A/PR/8/34 H1N1 (PR8) was grown in the allantoic cavity of 10- to 11-day-old hens eggs. Upon isolation, the allantoic fluid was titrated for HA activity using chicken RBC and stored at –70°C. Mice were infected i.p. with 500 HA units of PR8 virus.
Peptides
Peptides used in these studies included: the KdHA518–526 (IYSTVASSL) epitope and ILA-KdHA (ILAIYSTVASSL) hereafter referred to as ILA-KdHA, which extends the sequence of the nominal peptide by including three amino proximal residues that appear in the natural sequence of the protein. The A-KdHA, LA-KdHA, ALA-KdHA, AAA-KdHA, FLA-KdHA, and QILA-KdHA peptides extend the sequence of the nominal KdHA peptide by including the corresponding amino proximal residues. All peptides were synthesized at The Peptide Synthesis Core Facility at The Scripps Research Institute. Peptide purity was evaluated using reverse-phase HPLC analysis. All peptides were initially dissolved in DMSO at 10 mg/ml and stored at –70°C.
Purification, CFSE labeling and adoptive transfer of TCR transgenic CD8 T cells
Lymph nodes were harvested from TCR transgenic mice and CD8+ T cells were purified using MACS magnetic beads, according to the manufacturers instructions. Purity was always >90% as checked by flow cytometry. Purified CD8 T cells were labeled with the fluorescent dye CFSE. Briefly, cells were incubated with 10 µM CFSE at 37°C for 10 min, followed by two washes with ice-cold HBSS. A total of 3 x 106 CFSE-labeled T cells in 0.2 ml of HBSS was injected i.v. into each recipient mouse.
Loading of β2M KO spleen cells with ILA-peptide
ILA Ag-loaded spleen cells were prepared by osmotic shock using the method described by Steinman and coworkers (13). Briefly, 150 x 106 splenocytes from β2M KO mice were washed twice in RPMI 1640 and resuspended in 1 ml of hypertonic medium (0.5 M sucrose, 10% w/v polyethylene glycol 1000, and 10 mM HEPES in RPMI 1640 (pH 7.2)), containing the indicated concentration of corresponding peptides, for 10 min at 37°C. Then 13 ml of prewarmed hypotonic medium (40% H2O, 60% RPMI 1640) was added, and the cells were incubated for an additional 2 min at 37°C. Immediately thereafter, the cells were pelleted by centrifugation and washed twice with ice-cold HBSS, and 30 x 106 in 0.2 ml of ILA-loaded splenocytes was injected i.v. into each recipient mouse as a source of dying cells. In some experiments (where indicated), in addition to ILA-loaded splenocytes, mice were also i.p. injected with agonistic anti-CD40 Ab (FGK45, 150 µg) and polyinosinic-polycytidylic acid (200 µg; Sigma-Aldrich) at the same time.
Intracellular cytokine staining
To assess the ex vivo production of IFN-
in response to peptide Ag, single cell suspensions of purified lymphocytes from mouse spleen were prepared, and cells were incubated in complete RPMI 1640 medium with 1 µg/ml KdHA peptide and 1 µl/ml GolgiPlug solution (BD Pharmingen) for 6 h at 37°C. Cells were then incubated in 100 µl of 2.4 G2 hybridoma supernatant (American Type Culture Collection) for 10 min at 4°C to block Fc receptors. PE-conjugated anti-Thy1.1 and PerCP-conjugated anti-CD8 Ab were then added, and cells were incubated for an additional 30 min at 4°C. After two washes, intracellular IFN-
staining was performed according to the manufacturers instructions using the Cytofix/Cytoperm Plus kit (BD Pharmingen) and allophycocyanin-conjugated rat anti-mouse IFN-
. Cells were analyzed on a BD Biosciences FACSort or LSRII flow cytometer, and data were analyzed using CellQuest or FlowJo software. All Abs for flow cytometry were purchased from BD Pharmingen.
| Results |
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Our goal was to develop a method for in vivo induction of cross-presentation of the Kd-restricted HA peptide IYSTVASSL, which was based on Ag loading of spleen cells by osmotic shock (13). Upon injection in vivo, the apoptotic cells are cleared by cross-presenting DCs. The advantage of this method is that the concentration of Ag loading can be varied at will. In agreement with reports from several labs that have shown that nominal peptide or peptide-MHC complexes are not a source of Ag for cross-presentation (18, 19), we found this method was inefficient at inducing cross-presentation of nominal Ag (Fig. 1, left panels). Very high concentrations of the nominal peptide (500 µg/ml) were required to activate all of the naive clone 4 cells.
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To learn more about the types of N-terminal extensions that can successfully promote cross-priming, we synthesized KdHA peptides extended at the N-terminal by different lengths. As shown in Fig. 2A, neither A-KdHA nor LA-KdHA enhanced cross-presentation, as the levels of clone 4 division induced by spleen cells loaded with these two peptides were comparable with that of the nominal 9-mer KdHA peptide. However, when a third residue was added (ALA-KdHA, FLA-KdHA, or ILA-KdHA) the efficiency of cross-presentation was greatly enhanced. This suggests that a minimum of three residues is required for efficient cross-priming. However, the presence of L at P2 was important, as extension with AAA did not enhance cross-priming. When four residues from the sequence of natural HA protein were used (QILA-KdHA), this extended 13-mer also enhanced cross-presentation significantly. The results of a dose titration comparing each extension are provided in Fig. 2B.
N-terminal extension with ILA promotes TAP-dependent cross-presentation of the SIINFEKL epitope to OT-I CD8 T cells
To further test the generalization of the ILA-extension method, and to also determine whether the extended peptides required the presence of the TAP for cross-presentation by the APC, we next tested the Kb-restricted 8-mer SIINFEKL epitope derived from OVA protein that is recognized by CD8 cells from OT-I mice. β2M KO spleen cells were loaded in vitro with ILA-SIINFEKL peptide or nominal peptide. As reported previously, cross-presentation of the nominal peptide by this method was inefficient, as assessed by proliferation of CFSE-labeled SIINFEKL specific OT-I cells (Fig. 3A). This is consistent with the observations of Norbury et al. (18) as well as Shen and Rock (19) that the OVA nominal peptide is inefficient for cross-presentation. The ILA-extended form of epitope was cross-presented >20-fold more efficiently as based on the percentage of proliferating cells. Moreover, cross-presentation of ILA-SIINFEKL is TAP-dependent, as OT-I cells were not activated by ILA-SIINFEKL loaded spleen cells in a TAP-deficient host (Fig. 3B).
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Cross-presentation of ILA-KdHA leads to activation of clone 4 T cells, and can be used to induce tolerance or immunity
It has been shown that depending on the maturation status of the Ag-presenting DCs, T cell activation may lead to either tolerance or immunity. Cross-presentation of HA by quiescent DCs to clone 4 CD8 T cells in vivo leads to abortive activation in which CD8 T cells are activated but do not gain effector function (10). Therefore, we assessed effector function in clone 4 T cells following cross-presentation of ILA-KdHA to clone 4 T cells. As shown in Fig. 4A, in contrast to viral infection that induced robust cell division and IFN-
production, cross-presented ILA-KdHA leads to only partial activation as characterized by cell division but without IFN-
production. This phenotype is typical of clone 4 T cells undergoing tolerance after encounter with cross-presented Ags on resting DCs in the absence of inflammation. In contrast, cross-presented ILA-KdHA was able to induce effector function if the host also received inflammatory reagents in the form of anti-CD40 and polyinosinic-polycytidylic acid (Fig. 4A).
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| Discussion |
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Previous studies have presented two alternative views of the form of substrate that is required for cross-presentation. One view suggests that short peptides associated with cellular heat shock proteins are the predominant source of material that is available for cross-presentation by professional APCs (23). Our studies have not addressed the possibility that extended peptides may appear in the cytosol in association with heat shock proteins. Both the ILA-extended peptide and nominal HA peptide are in the size range known to bind to heat shock proteins (24). However, if such protection occurs, then it is unclear why the extended peptide is much more efficiently cross-presented than the nominal epitope. Another view suggests that intact proteins or soluble protein fragments that are larger than nominal peptide are the main form of Ag delivered by the donor cell for cross-presentation by the APC. The size of the fragments remains unresolved, and may include large post-proteasomal products; however, nominal peptide does not appear to have activity (17, 18, 19). None of these previous investigations have examined the minimum length of cellular peptide required to achieve efficient cross-presentation. In light of these past studies, it was surprising to find that by extending nominal CD8 epitopes at the N-terminal with as few as three residues, the efficiency of cross-presentation is increased 10- to 30-fold.
We find that cross-presentation of ILA-SIINFEKL is TAP-dependent. Currently, the detailed mechanisms involved in cross-presentation remain unresolved (2, 7, 25). At least two different pathways have been described and are distinguishable based on the role of TAP. In the TAP-dependent pathway, internalized protein is transferred from phagosome to the cytosol (26). Once in the cytosol, the exported Ag is degraded into oligopeptides by proteasomes and tripeptidyl peptidase II (27, 28, 29), and transported by TAP to MHC class I molecules in the endoplasmic reticulum (ER) or phagosomes (30). In the ER, peptides can be further trimmed by the ER amino peptidase ERAP1 (31). The fact that cross-presentation of ILA-extended SIINFEKL is dependent on TAP indicates that the extended peptide must go through the cytosol during a certain stage of the processing steps in the host DC, after which it is transported into the ER or phagosome for loading onto MHC class I molecules. There is also a TAP-independent pathway of cross-presentation that is insensitive to proteasome inhibitors (32). In this pathway, polypeptides are processed directly in the phagosome. It is unclear why the ILA-modified peptides do not take advantage of such a direct route.
There are at least two junctions at which ILA may enhance cross-presentation. Reits et al. (15) has shown that cytosolic amino peptidases degrade peptides within seconds, and that N- but not C-terminal extension up to a total peptide length of 15 aa increases the half-life of the peptide by
6- to 7-fold. The first three residues were particularly important in enhancing stability, and may explain why ILA but neither IL nor A was sufficient to enhance cross-priming. Beyond 15 aa, peptides become substrates for trimming by tripeptidyl peptidase II. Secondly, it has been shown that N-terminal extension of nominal peptide by even one or two residues can significantly increase the affinity of the peptide for TAP (33). Taken together, the N-terminal extended peptides may have both a longer half-life in the peptidase-rich cytosol and also enhanced affinity for the TAP. These two factors may contribute to the mechanism by which ILA may enhance the efficiency for cross-presentation.
We also took advantage of OT-I cells to compare the efficiency of cross-presentation of intact OVA protein with that of nominal peptide and ILA-extended peptide. On a molar basis, the intact protein was 3- to 10-fold more efficient than nominal peptide. This result is consistent with the results of Yewdell and colleagues (18) and Shen and Rock (19), both of which reported the inefficiency with which peptide is cross-presented. Comparison of the efficiency of cross-presentation of the ILA-extended peptide and the entire OVA protein indicated a 10- to 30-fold advantage to using the extended epitope. This may reflect the fact that protein processing can be inefficient. Although both ILA peptide and intact protein need to enter the cytosol to be transported by TAP into the ER, the protein, but presumably not ILA peptide, requires proteasomal degradation. This may result in the production of a precursor that is less efficiently transported to the ER than ILA peptide.
It is also of interest to note that there exists a preference of amino acid at position 2 from the N-terminal. For example, AAA could not enhance cross-presentation, whereas ALA was capable. It is possible that AAA-KdHA is a particularly good substrate for degradation in the cytosol, whereas ALA-KdHA and ILA-KdHA are spared. Further studies are needed to characterize the peptidase preference of substrates in more detail.
In summary, we have established a novel method that can efficiently target a known CD8 T cell nominal epitope to the cross-presentation pathway. Depending on the presence or absence of inflammatory signals, this method can be easily used for induction of immunity or tolerance.
| Acknowledgments |
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| Disclosures |
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| Footnotes |
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1 This work was supported by Grants DK50824 and U19 AI050864 from the National Institutes of Health. ![]()
2 Address correspondence and reprint requests to Dr. Linda A. Sherman, Department of Immunology, Mail Stop IMM-15, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037. E-mail address: lsherman{at}scripps.edu ![]()
3 Abbreviations used in this paper: DC, dendritic cell; HA, hemagglutinin; β2M, β2-microglobulin; KO, knockout; ER, endoplasmic reticulum. ![]()
Received for publication October 9, 2007. Accepted for publication October 12, 2007.
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