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T Cell Development by the Activator Protein 1 Transcription Factor c-Jun1Mammalian Genetics Laboratory, Lincolns Inn Fields Laboratories, London Research Institute, Cancer Research, London, United Kingdom
| Abstract |
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T cells, whereas 
T cell development was partially arrested at the double-negative 3 stage. The increased generation of 
T cells by loss of c-Jun was cell autonomous, because in a competitive reconstitution experiment the knockout-derived cells produced more 
T cells than did the control cells. C-jun-deficient immature T cells failed to efficiently repress transcription of IL-7R
, resulting in augmented IL-7R
mRNA and surface levels. Chromatin immunoprecipitation assays revealed binding of c-Jun to AP-1 binding sites present in the IL-7R
promoter, indicating direct transcriptional regulation. Thus, c-Jun controls the transcription of IL-7R
and is a novel regulator of the 
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T cell development. | Introduction |
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Thymocytes can be divided into four major subsets based on the expression of CD4 and CD8. The CD4CD8 double-negative (DN)4 cells are the most immature subset. The DN population can be further divided into four subsets (DN1DN4) based on their differential expression of CD44 and CD25. DN thymocytes mature in the order of CD44+CD25 (DN1), CD44+CD25+ (DN2), CD44CD25+ (DN3), and CD44CD25 (DN4) (2).
The decision between 
and 
T cells occurs at the DN stage, but the exact time point of specification remains to be determined (3). Likewise, whether the signaling from the 
or the 
TCR, respectively, is the instructive determinant of lineage choice or whether 
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commitment occurs at least in part independently of TCR rearrangement is unclear.
Although it appears that TCR gene rearrangements influence the 
vs 
lineage decision, there are also indications that this cannot be the sole determinant of linage decision. If expression of an in-frame 
TCR invariably led to 
T cell development, one might expect a complete block in 
T cell development in mice expressing a rearranged 
TCR transgene. This, however, is not the case: many 
TCR-transgenic mice contain significant numbers of 
lineage T cells (4, 5). Conversely, significant numbers of 
T cells are present in mice expressing a rearranged 
TCR transgene (6). Recent work suggests that quantitative differences in TCR signaling appear to be influencing 
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lineage commitment (7, 8).
To make the developmental transition from DN3 to DN4, the TCR chains must be assembled into the pre-TCR complex, which consists of a TCR
-chain, the invariant pT
-chain, and CD3 components. Only cells that have a functional pre-TCR survive the transition from DN3 to DN4, a process also known as
selection. In mice deficient for components of the pre-TCR developing 
lineage thymocytes are blocked at the DN3 stage and do not survive (9, 10, 11, 12, 13, 14). The requirement for some pre-TCR components is confined to developing 
T cells, because the absence of CD3
and CD3
has no effect on and pT
deficiency even increases 
T cell number (9, 14, 15).
A number of signaling pathways in addition to the pre-TCR have been implicated in 
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lineage commitment, one of which is the IL-7/IL-7R pathway. IL-7R signaling is essential for the generation and maintenance of precursor cells committed to either the T or B cell lineage. In early thymocyte development, the loss of IL-7 or IL-7R
results in a substantial reduction in the number of total thymocytes and mature T cells (16, 17). IL-7R signaling has an especially drastic effect on 
T cells, which are absent in mice lacking IL-7 or IL-7R
(18, 19). IL-7 treatment augments 
T cell number in ex vivo systems (20, 21), suggesting that IL-7 signaling can promote 
T cell development.
The transcription factor AP-1 consists of a variety of dimers composed of members of the Fos and Jun families of proteins (22). Although the Fos proteins (c-Fos, FosB, Fra-1, Fra-2) can only heterodimerize with members of the Jun family, the Jun proteins (c-Jun, JunB, JunD) can both homodimerize and heterodimerize with other Jun or Fos members to form transcriptionally active complexes (22, 23, 24).
The activity of the AP-1 transcription factor is strongly induced in response to numerous extracellular stimuli including TCR signaling. AP-1 stimulation is mediated, in part, by the phosphorylation of c-Jun by the JNKs (25). c-Jun N-terminal phosphorylation at serine residues 63 and 73 and threonine residues 91 and 93 within its transactivation domain is thought to increase transcription of target genes, one of which is the c-jun gene itself (26).
The function of JNK signaling in T cells has been extensively studied and has revealed a multitude of JNK functions ranging from T cell development and proliferation to T cell differentiation (27, 28, 29, 30, 31). c-Jun is one of the main targets of JNK signaling, but its function in T cells is less well understood, in part due to the embryonic lethality of c-jun-deficient mice (32, 33). RAG2 complementation experiments with c-jun/ ES cells revealed reduced restoration of thymocytes but normal T cell proliferation and IL-2 production (34).
The role of c-Jun and AP-1 in thymopoiesis has also been investigated using dominant-negative approaches in transgenic mice. B cell-activating transcription factor belongs to the AP-1 superfamily of basic leucine zipper transcription factors and forms heterodimers with Jun that possess minimal transcriptional activity. Overexpression of B cell-activating transcription factor using the lck promoter resulted in a specific defect in NKT cell development, and reduced thymocyte proliferation (35, 36). Moreover, transgenic overexpression of a dominant-negative version of c-Jun caused aberrant thymic organization accompanied by reduced T cell proliferation and IL-2 production (37). T cell development has also been investigated in junAA mice, in which serines 63 and 73 in the c-Jun N terminus were replaced by alanines using a knock-in approach, but no defects were found (38, 39).
To clarify the role of c-Jun in T cell development, we have used conditional mutagenesis to generate mice lacking c-Jun in the T cell lineage (c-jun
T mice; Refs. 40 and 41). In this study, we show that c-jun inactivation during early T cell development resulted not only in a severe developmental arrest of 
T cells at the DN3 stage but also in enhanced generation of 
T cells.
| Materials and Methods |
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c-Jun
T mice were generated by crossing the c-junf/f mice (40) with mice carrying the Cre recombinase transgene under the control of the proximal lck promoter (41). All mice used were between 6 and 8 wk old and always were bread and maintained in a clean individually ventilated cage animal facility. The Home Office approved all experimental protocols used in this work.
Mixed bone marrow (BM) chimeras
Mixed BM chimeras were made according to standard protocols (42). rag2 knockout host mice were irradiated with two doses of 500 rads from a cesium source separated by 3 h. One hour after the second dose, 2 x 106 mixed donor cells were injected i.v. The donor cells were a mix of BMs from C57BL/6 (harboring the CD45.1 allele) and c-jun
T mice. The BM cells were collected by flushing the bones from the hind legs. The donor cells were distinguished by the surface expression of CD45.1 (C57BL/6 wild type) and CD45.2 (c-jun
T). BM chimeras were analyzed 3 mo postinjection for the presence of thymic TCR
/TCR
T cells.
Flow cytometry and cell sorting
FITC, PE, allophycocyanin, and biotin-conjugated Abs were obtained from BD Pharmingen. Tricolor-conjugated Abs or streptavidin were from Caltag Laboratories. The Fix & Perm kit from Caltag Laboratories was used for all the intracellular stainings following the manufacturers protocol. Stained cells were analyzed on a FACSCalibur (BD Biosciences), and the data were analyzed using FlowJo software (Tree Star). CD4CD8 DN T cell subsets were analyzed for CD44 and CD25 surface expression by lineage exclusion of mature CD4+CD8+ double-positive and CD4+, CD8+ single-positive as well as non-T cell lineage cells using a mixture of biotinylated Abs (CD4, CD8, B220, Mac-1, pan-NK, Gr-1, and TCR
) revealed with streptavidin-Tricolor and costained with CD25-FITC, CD44-PE, and Thy1.2-allophycocyanin. When only DN3 and DN4 were desired to be analyzed, CD44-biotin was included in the lineage mixture to exclude CD44+ DN1 and DN2. Thy1.2 was used in all the analysis as a T cell-specific marker. Specific cell subsets defined by their cell surface markers were sorted using a MoFlo cell sorter (DakoCytomation). Sorted cells were reanalyzed by FACS and were
95% pure.
Cell cycle and cell death analysis
Cellular DNA content was assayed on fixed cells using 4',6'-diamidino-2-phenylindole (DAPI) staining. Surface-stained thymocytes were fixed and permeabilized with the Fix & Perm kit from Caltag Laboratories following the manufacturers protocol. Stained cells were incubated with DAPI (10 µg/ml), and DNA content was analyzed using the LSRII cytometer (BD Biosciences) and using FlowJo software. Cell death was analyzed on nonfixed thymocytes by the Annexin V-FITC Apoptosis Detection Kit (BD Biosciences) following the manufacturers protocol. Stained cells were analyzed for cell death assays with a FACSCalibur (BD Biosciences).
Genomic PCR to detect c-jun deletion
Genomic DNA from different mouse tissues or sorted cells were obtained following standard techniques and subjected to PCR using three primers to detect the floxed and the deleted c-jun alleles as described (40). PCR products were separated on a 2% agarose gel. In a single PCR, these primers generate a 350-bp fragment indicative of the c-junf allele and a 500-bp fragment for the c-jun
allele.
Western blot analysis
Protein extracts and SDS-PAGE analysis were performed according to standard techniques (43). The blot was developed with the indicated Abs (c-Jun H-79 purchased from Santa Cruz;
-actin from Sigma-Aldrich) and visualized by an ECL detection system (Amersham Pharmacia).
Semiquantitative and quantitative real-time PCR
Total RNA was isolated from sorted DN3 using RNAeasy (Qiagen). cDNA was made using the Ready-To-Go First-Strand Beads system (Amersham Biosciences) following the manufacturers protocol. For semiquantitative PCR, different amounts of cDNA were used and amplified using Qiagen Taq polymerase. The primers used to amplify GAPDH, Notch1, RBP-
j, and IL-7R
cDNAs are available upon request.
Real-time PCR was using a Chromo4Fluorescence machine (MJ Research), and the data were analyzed using the provided Opticon Monitor3 software. The reaction mixture consist on 2.5 µl of cDNA, 12.5 µl of 2x SYBR Green PCR master mixture (Roche Applied Science), 2 µl of 5 µM forward primer, and 2 µl of 5 µM reverse primer in a 25-µl reaction volume. The same primer pairs were used for real-time PCR and semiquantitative PCR. The PCR protocol consisted of one 10-min denaturation cycle at 95°C followed by 40 cycles of denaturation at 95°C for 15 s and annealing/extension at 60°C for 1 min. All real-time PCR data are expressed as fold change in mRNA levels with respect to control after normalizing to the levels of GAPDH.
Chromatin immunoprecipitation (ChIP)
Jurkat human leukemia T cells were maintained in log phase growth at 37°C under a humidified atmosphere with 5% CO2 in RPMI 1640 supplemented with 10% (v/v) FBS, 2 mM L-glutamine, 100 U/ml penicillin, and 100 mg/ml streptomycin.
ChIP analysis was performed as described previously (43). Immunoprecipitations were conducted with c-Jun-specific or control rabbit IgG Abs. The oligonucleotide sequences used to amplify the DNA fragments are available upon request.
FTOC
Thymi from c-junf/f or c-jun
T E15.5 embryos were dissected in single lobes, and each lobe was placed on the surface of polycarbonate filters (0.8-µm pore size; Nuclepore) that were supported on Gelfoam in 5 ml of DMEM medium supplemented with L-glutamine, 25 mM HEPES, 10% FCS, 100 U/ml penicillin, and 100 mg/ml streptomycin. The cultures were grown in humidified atmosphere in 5% CO2 at 37°C for 11 days with or without mouse rIL-7 (R&D Systems), changing the medium every 3 days. After the culture period, the T cell development was analyzed by flow cytometry.
| Results |
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To assess the functions of c-jun in T cells, we deleted c-jun during early T cell development by crossing c-junf/f mice with lck-cre transgenics (c-jun
T mice; Refs. 40 and 41). lck-cre-mediated deletion of c-junf was efficient in thymus and detectable in spleen but could not be detected in nonlymphoid organs (Fig. 1, A and B). To further characterize deletion of the floxed c-jun allele during T cell development, genomic DNA was purified from total and sorted thymocyte subpopulations, and the deletion efficiency was determined by PCR analysis. c-junf deletion became detectable at the DN2 stage and reached completion at the DN4 stage. c-junf was also completely inactivated in CD4+CD8+ double-positive, CD4+CD8 and CD4CD8+ single-positive 
T cells as well as in 
T cells (Fig. 1C). The loss of the c-Jun protein in c-jun
T T cells was also confirmed by Western blot analyses. c-Jun protein became detectable in total wild-type thymocytes only after treatment with PMA-ionomycin, but c-jun
T thymocytes lacked c-Jun protein. Likewise, low levels of c-Jun were present in control peripheral T cells, and protein levels were strongly induced by treatment with PMA-ionomycin, but neither basal nor induced c-Jun protein could be detected in c-jun
T peripheral T cells (Fig. 1D).
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At the age of 8 wk, the size of the thymus was reduced in c-jun
T mice relative to c-junf/f controls (Fig. 2A), but gross thymic architecture and histology was normal (Fig. 2B). Consistent with the reduced thymus size, the absolute number of c-jun
T total thymocytes was reduced 4- to 5-fold to 2025% of that of control mice because of a decrease in all thymocyte subsets with the exception of the DN subpopulation (Fig. 2C). However, the relative proportions of 
T cell subsets were not drastically skewed except for an increase in DN cells (Fig. 2C). Further examination of the DN thymocyte population using CD44 vs CD25 FACS profiles revealed an accumulation of DN2/DN3 cells and an increase of CD25bright/+ cells in c-jun
T mice, suggesting a problem at DN3 to DN4 transition of T cell development (Fig. 2D).
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T cell development, thymocytes from c-jun
T mice were stained for surface expression of 
TCR. The absolute number of 
T cells from thymi of c-jun
T mice was increased
23 times compared with that from controls (Fig. 3A). The number of peripheral 
T cells was also higher in the spleens of c-jun
T mice, whereas the percentages and numbers of 
T cells was reduced (Fig. 3B). There was a significant increase in both CD8
+ and CD8
splenic 
T cells in c-jun
T mice (Fig. 3C).
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T cells in G1, S, and G2-M phases of the cell cycle was comparable between in c-jun
T and control mice, indicating that the c-jun is not required for thymocyte cell cycle progression (Fig. 4A). In contrast, there were differences in the extent of cell death. The percentage of annexin V-positive cells was increased in c-jun-mutant DN3 and DN4 thymocytes, suggesting a role for c-Jun in thymocyte survival (Fig. 4B).
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linage development (Fig. 5, A and B) than c-Jun deletion (Fig. 2) and induced only a marginal increase of 
T cell production (Fig. 5C).
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and 
T cell precursors in DN4 thymocytes
The increase in 
lineage T cells in c-jun conditional knockout mice could be due to the partial block in development of 
lineage cells, allowing for expansion of 
T cells in the thymus. To address this problem, we generated mixed BM chimeric mice by coinjecting BM cells from c-jun
T and wild-type control mice into lethally irradiated rag2/ hosts. The analysis of reconstituted mice revealed that c-jun
T cells were slightly less efficient in generating 
T cells, but they showed markedly increased 
T cell development (Table I), suggesting that the effect on 
T cells by c-jun deletion is cell autonomous.
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T cell development. Precursors of 
and 
T cells can be identified in the DN4 population by intracellular expression of TCR
and TCR
proteins, respectively (45). All DN3 and DN4 thymocytes of c-jun
T mice as well as c-junf/f controls were positive for intracellular staining for CD3
(icCD3
), confirming their T cell identity (Fig. 6A). In contrast, the percentages of icTCR
-expressing cells were normal in DN3 cells but reduced at the DN4 stage in c-jun
T mice (Fig. 6B). lck-cre-transgenic mice showed a smaller increase in icTCR
+ cells, which was intermediate between c-jun
T and c-junf/f mice (Fig. 6B). The increased numbers of mature 
T cells were probably due to increased generation of immature 
T cell precursors, given that there was an
2- to 3-fold increase in the percentage of icTCR
+ DN4 cells in c-jun
T mice compared with c-junf/f and lck-cre-transgenic controls (Fig. 6C). Therefore, the alterations in the numbers of mature 
and 
T cells correlate with abnormal generation of their respective precursor cells.
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T cell lineage decision
c-Jun, like other transcription factors, can both activate and repress gene expression (46). Phosphorylation of serines 63 and 73 within the c-Jun transactivation domain by the JNKs greatly augments the activity of c-Jun (25). junAA mice, in which serines 63 and 73 in the c-Jun N terminus were replaced by alanines using a knock-in approach, were previously shown to have normal 
T cell development (38, 39). To determine whether target gene activation by c-Jun mediated through c-Jun N-terminal phosphorylation plays a role in T cell lineage decision, we investigated 
T cell development in junAA mice. junAA homozygous thymocytes had normal levels of 
TCR surface expression and the absolute number of 
T cells from thymi of junAA mice was unaltered (Fig. 7A). Similarly, the number of splenic 
T cells, of both the CD8
+ and CD8
subset, was comparable between junAA and control mice (Fig. 7, B and C). Therefore, stimulation of c-Jun function by N-terminal phosphorylation appears to be dispensable for 
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T cell lineage decision, suggesting that T cell development may be controlled by c-Jun-mediated target gene repression, rather than target gene activation.
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in c-jun
T pro-T cells
To gain insight into how c-jun controls T cell development, we tested the transcriptional regulation of molecules known to be involved in 
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lineage decision. We first investigated the expression of components of the TCR complex, which are key regulators of early T cell development (9, 10, 11, 12, 13, 14). However, the expression levels of pT
, TCR
, and of the CD3 components of the pre-TCR, CD3
, CD3
, CD3
, and CD3
were not affected in the absence of c-jun. There was also no alteration in the mRNA levels of RAG1 and RAG2, which are required for TCR rearrangement (data not shown).
In addition to the TCR, several other signaling pathways are known to regulate 
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T cell development, including Notch and IL-7 signaling (18, 19, 47, 48). Although the expression of the Notch1 and its transcriptional partner RBP-j
was unaffected, mRNA levels of IL-7R
were increased in c-jun
T DN3 cells, as detected by both conventional and quantitative PCR (Fig. 8A). As a consequence, IL-7R
protein surface levels were also higher in c-jun
T DN3 and DN4 cells as well as in c-jun
T 
T cells compared with c-junf/f and lck-cre transgenic controls (Fig. 8, B and C).
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promoter for the presence of AP-1 sites. Within 3.2 kb upstream of the ATG initiation codon, several bona fide AP-1 and AP-1-like sites were found (Fig. 8D). ChIP assays revealed efficient binding of c-Jun to the jun1/2 sites of the c-jun promoter and to the cdc2 promoter, both established c-Jun target genes (43, 49), but no binding to the gapdh promoter, used as negative control (Fig. 8D). Strikingly, two regions of the IL-7R
promoter harboring multiple predicted c-Jun binding sites were detectable in c-Jun ChIP (Fig. 8D). Therefore, c-Jun binds to the IL-7R
promoter and appears to directly regulate IL-7R
.
Increased 
T cell development of c-jun-deficient thymocytes in vitro
To directly investigate the relevance of IL-7R
regulation by c-jun, the development of thymocytes isolated from control and c-jun
T embryos was studied in FTOCs. Abnormal 
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T cell development of c-jun
T mice was reproduced in FTOC because both DP and CD4+ and CD8+ SP 
T cells were reduced in number, and there was a substantial increase in 
T cells in c-jun
T cultures (Fig. 9). IL-7 treatment of control FTOC induced 
T cell development, which, however, did not reach the numbers observed in untreated c-jun-deficient cultures. The number of 
T cells in c-jun
T cultures was further augmented by IL-7, at the expense of DP 
T cells whose number was drastically reduced (Fig. 9). IL-7 treatment had only a marginal effect on control 
T cells (Fig. 9). Therefore, deregulation of IL-7 signaling may contribute to the defect in T cell development in the absence of c-jun.
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| Discussion |
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c-Jun is an important target of the JNK signaling pathway, but c-Jun N-terminal phosphorylation appears to be dispensable for c-Jun function in thymocytes. T cell development proceeds normally in the absence of both jnk1 and jnk2, which are likely to encode all JNK isoenzymes present in thymus (29). Similarly, there were no detectable abnormalities in 
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lineage commitment or
selection in homozygous junAA mice (Fig. 7 and data not shown). As c-Jun N-terminal phosphorylation is believed to be a key modification required for target gene activation, these data are in agreement with the notion that c-Jun regulates the 
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lineage decision by repressing, rather than activating, essential target genes.
The block of 
T cell development in c-jun
T mice is incomplete, because CD4 and CD8+ peripheral T cells are present, although reduced in number. It is possible that the 
T cells developing in c-jun
T mice are derived from thymocytes that have escaped lck-cre-mediated deletion of c-junf. If this was the case, inactivation of c-jun at even earlier stages of T cell development should prevent the generation of any mature 
T cell. However, RAG2 complementation experiments showed that c-jun/ ES cells can give rise to 
T cells, although with reduced efficiency, suggesting that there is no absolute requirement for c-jun in 
T cell lymphopoiesis, while 
T cells were not analyzed (34).
Although the details of the underlying molecular mechanism are only incompletely understood, it is clear that several signaling pathways can influence 
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lineage decision (53). The IL-7R
is required for 
T cell development (18), and there is evidence that increased IL-7R
signaling correlates with 
T cell generation (20, 21). Expression of IL-7R
is down-regulated during progression from DN2 to DN3 (21, 54) and microarray analysis of various stages of thymocyte development has identified c-jun as being specifically up-regulated at the DN3 stage (55). This inverse correlation suggests that c-Jun may be involved in the repression of IL-7R
expression at the DN2/DN3 transition (Fig. 8).
The relative strength of TCR signaling has been proposed to be a determinant of the 
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lineage decision. According to this model, 
T cell development would be favored by strong TCR signaling, and 
T cell development would be resulting from weaker TCR signals (7, 8).
IL-7R
expression is heterogeneous in DN1 thymocytes, and at this stage high level of IL-7R
expression does not indicate increased T cell developmental potential (56, 57). However, at the DN2 stage increased IL-7R
expression correlates with increased generation of 
T cells (21), indicating that IL-7R signal strength may favor 
linage choice, possibly by promoting rearrangement and/or expression of the TCR
locus (58, 59, 60, 61). The relationship between TCR and IL-7 signaling is controversial (53), and it is unclear whether TCR and IL-7R act independently or whether IL-7R might, using an unknown mechanism, positively modulate or mimic some aspects of TCR signaling, thereby increasing the strength of the 
T cell-inducing signal.
This study has identified c-Jun as a novel regulator of T cell lineage decision and development. The molecular mechanisms governing 
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lineage decision are not well understood, and it is likely that several pathways contribute to the molecular control of this biological process. Therefore, by regulating IL-7R
expression (and probably other as yet unidentified target genes), c-Jun may be part of a signaling network that regulates thymic T cell development.
| Acknowledgments |
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| Disclosures |
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| Footnotes |
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1 The London Research Institute is funded by Cancer Research U.K. L.R.-S. acknowledges support from an European Union Marie-Curie fellowship. ![]()
2 Current address: Epithelial Homeostasis and Cancer, Department of Cell Differentiation and Cancer, Center of Genomic Regulation, Doctor Aiguader 88, 08003 Barcelona, Spain. ![]()
3 Address correspondence and reprint requests to Dr. Axel Behrens, Cancer Research U.K. London Research Institute, Lincolns Inn Fields Laboratories, Mammalian Genetics Laboratory, 44, Lincolns Inn Fields, London WC2A 3PX, U.K. E-mail address: axel.behrens{at}cancer.org.uk ![]()
4 Abbreviations used in this paper: DN, double negative; BM, bone marrow; DAPI, 4',6'-diamidino-2-phenylindole; ChIP, chromatin immunoprecipitation; FTOC, fetal thymus organ culture. ![]()
Received for publication March 9, 2006. Accepted for publication February 22, 2007.
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