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* Department of Immunology, University of Washington, Seattle, WA 98195;
Department of Immunology, M. D. Anderson Cancer Center, Houston, TX 77030; and
Institute of Immunology, Biomedical Sciences Research Center Hellas, Greece
| Abstract |
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| Introduction |
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In this study, we describe a novel B7-like molecule, named B7 superfamily member 3 (B7S3). It has two isoforms expressed in both lymphoid and nonlymphoid tissues. A putative receptor for B7S3 is constitutively expressed on APCs, and induced on T cells upon activation. B7S3-Ig inhibited CD4 and CD8 T cell proliferation and IL-2 production, as well as effector cytokine production. Interestingly, the B7S3 genes in mouse and human have distinct structural features.
| Materials and Methods |
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The mouse B7S3 EST clone (Incyte Genomics) was completely sequenced. The Ig-like domains of the deduced B7S3 protein were predicted by the National Center for Biotechnology Information (NCBI) CD search program. The size and location of each exon of the B7S3 gene and its homologs were determined via NCBI genomic database searches.
Real-time PCR analysis
Primers spanning the IgC and 3' untranslated region of B7S3 short isoform (B7S3S) are forward TCATTCAGGAGGTTGGTTCC, reverse GGCAGGTGATTCTGGGTTAT, and were used to analyze the expression of B7S3S. Primers spanning the TM2 and TM3 of B7S3 long isoform (B7S3L) are forward TGGAAACGTGTTTGGATAATGA, reverse TTGTTTTAGATGCAAAATGAGCA, and were used to analyze the expression of B7S3L. cDNA samples were made from tissues of B6 mice and were subjected to real-time PCR analysis using SYBR Green Supermix according to the manufacturers instructions (Bio-Rad) with the following modification: denaturation for 30 s at 95°C, annealing for 20 s at 60°C and extension for 30 s at 72°C with fluorescence detection at 60°C after each cycle. The results were obtained and analyzed with iCyclere iQ real-time detection software (Bio-Rad).
Confocal microscopy
293 cells were used to examine the cellular localization of B7S3. Full length of B7S3S or B7S3L, including the signal sequence, were amplified from mouse B7S3 EST clone (Incyte Genomics) or RIKEN clone (A430070M19) by PCR and subcloned into peGFPN1 vector (Invitrogen Life Technologies). After transfection of these vectors into 293 cells, 1 million cells were stained with cholera toxin B to show the cell membrane (8 µg/ml; Sigma-Aldrich) at 4°C for 20 min. Fluorescence was detected using an Olympus Fluoview FV300 confocal laser scanning biological microscope.
Expression of B7S3-Ig protein
A soluble B7S3-Ig protein was generated by PCR amplification of a sequence coding aa 23205, forward AAGATCTGAAAAATTCACAGTGACTGGC and reverse AACTAGTGGCTTCAATAAGAAGCGTCAT), which was then cloned into the DES-Ig vector (9). B7S3-Ig expression vector was stably transfected into Drosophila S2 cells, and the secreted B7S3-Ig fusion protein was purified with a protein A column.
Flow cytometry analysis
B7S3-Ig was biotinylated with sulfo-NHS-LC-Biotin (Pierce) and used for flow cytometry analysis. Biotinylated human IgG1 and boiled B7S3-Ig were used as staining controls. Before staining, cells were preblocked with human IgG1 (Sigma-Aldrich).
In vitro T cell assays
T cells isolated from C57BL/6, OT-I, or OT-II mice were cultured in 96-well plates (0.2 million cells/well) precoated with anti-CD3 and human IgG1 or B7S3-Ig. Coated plates were washed with PBS three times before seeding of the cells. IL-2 production was measured 24 h after T cell activation, and cell proliferation was measured after 72 h by incubation with [3H]thymidine in the last 8 h. A 30 U/ml exogenous IL-2 was added to the culture in some experiments. To analyze the effect of B7S3 on effector T cells, total splenocytes from OT-I and OT-II mice were stimulated with 0.01 µg/ml OT-I and 1 µg/ml OT-II peptides, respectively, in the presence of 30 U/ml IL-2. Seven days after stimulation following an extensive wash, cells were plated in 24-well plates (2.5 million/well) bound with anti-CD3 Ab (5 µg/ml) in the presence of 5 µg/ml human IgG1 or B7S3-Ig. IL-2, IFN-
, TNF-
, and IL-4 production were measured by ELISA 24 h after secondary stimulation.
Luciferase assay
DO11.10 T cells transfected with 0.25 µg of PRL-null (Promega) and 1 µg of luciferase promoter reporter plasmids for NFAT or NF-
B (gifts from Dr. R. Flavell, Yale University, New Haven, CT) were stimulated with 1 µg/ml anti-CD3 Ab with 5 µg/ml human IgG or B7S3-Ig for 4 h, and luciferase activities were measured using the Dual-Luciferase system (Promega).
| Results |
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In a homology search of human genome database, we discovered a novel B7-like gene named B7S3 (B7 superfamily member 3), located on human chromosome 1. Using the sequence of this human gene to search the mouse EST database, we found a clone (GenBank accession no. BC042786, clone IMAGE:3603407) that may encode the mouse homolog. We completely sequenced this clone, and the deduced amino acid sequence from an open reading frame predicted a protein with the structural features similar to all of the B7 family members. It contains a leader peptide at its N terminus, an IgV-like domain, and a half IgC-like domain (Fig. 1A), all of which are encoded by a separate exon (Fig. 1B). Recently, a new EST clone derived from neonatal thymus was disclosed by RIKEN (GenBank accession no. AK040156), which shared these three domains of B7S3 followed by additional sequences encoded by three exons (Fig. 1, A and B). Therefore, we named the short form as B7S3S and the long form as B7S3L. The consensus amino acids in the IgV-like domains of the B7 family members are conserved in B7S3 (Fig. 1A). However, unlike the other known B7 molecules, the IgC-like domain of B7S3 does not appear to be complete. Recombinant full-length B7S3S protein was not secreted from Drosophila S2 or human 293 cells (data not shown). Because B7S3S does not have the characteristics of a GPI-linked protein (18), a hydrophobic region (approximately from aa 198 to 218) at the C terminus may serve as a transmembrane domain and deletion of this region allows secretion of B7S3 into supernatant (see below). Interestingly, the B7S3L contains two additional predicted transmembrane domains at its C terminus. When fusion proteins containing either B7S3S or B7S3L with a C-terminal GFP tag are expressed in 293 cells, both of them are expressed on the cell membrane (Fig. 1C).
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34% identity with butyrophilin-like molecules. Linsley et al. (19) proposed an extended B7 family, which also includes butyrophilin, myelin oligodendrocyte glycoprotein, and the chicken B-G Ag based on their common sequence identity as compared with other Ig superfamily members. However, although B7S3, like other new B7 family members, shares slightly higher homology with butyrophilin proteins, the absence of the heptad structure and B30.2 domains makes it more similar in protein structure to B7 family members. Therefore, we regard B7S3 as a novel B7 family member. Broad expression of B7S3 isoforms in lymphoid and nonlymphoid tissues
To examine B7S3 expression, we used several pairs of PCR primers that spanned different regions of B7S3S or B7S3L gene. RT-PCR analysis revealed that B7S3S is widely expressed in tissues we examined, but B7S3L is only expressed in several tissues with very low levels (data not shown). To determine the expression levels of B7S3 isoforms in different tissues, real-time PCR analysis was performed. B7S3S mRNA was found expressed in nonlymphoid tissues, most abundantly in lung and at reduced levels in kidney, heart, and stomach (Fig. 2A). In addition, B7S3S mRNA was also expressed in lymphoid organs spleen, lymph nodes, and thymus. In contrast, the expression of B7S3L mRNA is very restricted, with only low levels detected in the thymus, stomach, intestine, and heart (Fig. 2B). The expression levels of B7S3 in lymphoid cells, including CD4+ T cells, CD8+ T cells, B cells, bone marrow-derived dendritic cells, and peritoneal macrophages, were also examined by real-time PCR. The levels of B7S3S are very low in these cells, and B7S3L almost undetectable (data not shown). We also measured the levels of B7S3S in bone marrow-derived dendritic cells and peritoneal macrophages after different stimuli, including LPS, CpG, TLR2, polyinosinic-polycytidylic acid (poly(I:C)),4 TNF-
, and IL-17. Interestingly, B7S3S is up-regulated after stimulation with poly(I:C) or TNF-
plus IL-17 in bone marrow-derived dendritic cells (Fig. 2C), and after LPS or IL-17 stimulation in peritoneal macrophages (Fig. 2D). These data indicate potential regulation of B7S3 expression by innate and inflammatory stimuli, though the significance of this observation needs to be further investigated.
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To examine the expression pattern of the B7S3 receptors and its possible immune function, we constructed a B7S3-Ig fusion protein that contains the Ig-like domains of B7S3 and a human IgG tag (9). Interestingly, when we used the biotinylated B7S3-Ig fusion protein to stain the total splenocytes, we found it bound to B220+ B cells, CD11chigh dendritic cells and Mac-1+ macrophages in spleen (Fig. 3A) as well as peritoneal macrophages (data not shown). Other Ig fusion proteins, including B7S1, B7-H3, and B7h we prepared in the same fashion did not bind to these cells (9, 13, 20). Neither did boiled B7S3-Ig (Fig. 3A). The binding of B7S3-Ig to B cells was not affected by LPS stimulation (Fig. 3A). These results indicate that the B7S3 receptor is constitutively expressed on APCs, distinct from the receptors of other B7 molecules.
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Therefore, the B7S3 receptor on T cells shares a similar expression pattern with the receptors for other new B7 family members, B7h (ICOS), PDL1/PDL2 (PD-1), B7-H3 (unknown), and B7S1 (unknown). We activated T cells from CD28 and ICOS knockout mice and found that the B7S3-Ig binding was not altered (Fig. 3B). B7S3-Ig did not bind to 293 cells transfected with a PD-1 expression vector (data not shown). In addition, B7S3-Ig bound similarly to BTLA/ and BTLA+/ T and B cells (Fig. 3D). Therefore, the B7S3 receptor is distinct from CD28, ICOS, PD-1, and BTLA.
B7S3-Ig inhibits T cell activation and effector function
To study B7S3 function in the immune system, we first tested the effect of B7S3-Ig on B cells and macrophages by itself or together with other stimuli such as LPS or anti-CD40 for B cells and LPS for macrophages. B7S3-Ig treatment did not alter the proliferative response of B cells or proinflammatory cytokine production by macrophages (data not shown).
To assess the function of B7S3 on T cell activation, we stimulated purified CD4 and CD8 T cells from C57BL/6 mice with anti-CD3 together with B7S3-Ig or human IgG and measured cell proliferation and IL-2 production. Compared with cells treated with human IgG1, B7S3-Ig treatment strongly inhibited anti-CD3-activated proliferation by both CD4 and CD8 cells (Fig. 4A). When we measured IL-2 production 24 h after T cell activation by ELISA, B7S3-Ig-treated CD4 and CD8 T cells exhibited greatly reduced IL-2 production compared with those treated with human IgG (Fig. 4B). This inhibition was dose-dependent (Fig. 4D). Boiled B7S3-Ig completely lost the inhibitory effect (Fig. 4E). Addition of IL-2 restored the proliferation of B7S3-Ig-treated CD4 and CD8 T cells (Fig. 4C). These results indicate that B7S3 is a negative regulator of T cell activation, which functions by inhibiting IL-2 expression.
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B (21). We thus examined whether B7S3-Ig interfered with the IL-2 transcription machinery. B7S3-Ig greatly attenuated IL-2 production (Fig. 5) and NFAT and NF-
B activities (Fig. 5) in DO11.10 cells induced by anti-CD3 treatment. These results indicate that B7S3 inhibits the transcriptional machinery responsible for IL-2 gene expression in activated T cells, which leads to the defective IL-2 production and therefore defective T cell proliferation.
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, TNF-
, and IL-2 by OT-I effector cells (Fig. 6A) and IL-4, IL-2, and IFN-
by OT-II effector cells (Fig. 6B). Therefore, in accordance with its expression pattern, these results suggest that B7S3 also acts as a potential negative regulator of effector CD4 and CD8 T cells.
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In addition to the two forms of B7S3, we found 10 close homologs of B7S3 within a 2-Mb region on mouse chromosome 4 (Fig. 7A). They all have a pair of exons encoding the Ig-like domains sharing various degrees of homology with those of B7S3, from 86% to 44% (Fig. 7), which are well above the homology seen between B7S3 and other B7 or butyrophilin family members. Therefore, a B7S3 gene family exists in mice. A search in the mouse EST database revealed that four genes had corresponding EST clones. To study the human B7S3 gene, we used the deduced amino acid sequence of mouse B7S3 to search back in the human genome database. A single pair of two exons bearing highest homology to mouse B7S3 was found located on human chromosome 1 (Fig. 7A). A search of the available rat genome database indicated a similar genomic B7S3 configuration as in mouse (data not shown). This information nonetheless suggests selective evolution of immune regulatory pathways within mammalian species.
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| Discussion |
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B activities in DO11.10 cells induced by anti-CD3 treatment. These results indicate that B7S3 inhibits the transcriptional machinery responsible for cytokine gene expression in activated T cells. B7S3 thus may play similar functional roles as the existing negative costimulatory molecules in the B7 family. Structurally, B7S3 shares significant sequence homology with existing B7 and butyrophilin family members. They have been proposed to be included in an extended B7 family based on their sequence similarities compared with other Ig superfamily members (19). In this extended B7 family, there has been an expansion of negative costimulatory molecules. Notably, BTNL2 was reported as the first member of the butyrophilin family that inhibited T cell activation (17). The importance of BTNL2 function was revealed by its association with the inflammatory autoimmune diseases sarcoidosis and myositis in human (22, 23). The B7 and butyrophilin family members may thus have similar functional roles in immune regulation.
Two isoforms of B7S3 exist with the long form bearing additional transmembrane regions. The short form was initially regarded as a secreted protein because it did not have a long enough stretch of hydrophobic amino acids for spanning across the plasma membrane. However, recombinant full-length B7S3S protein was not secreted from Drosophila S2 or human 293 cells. When enhanced GFP was fused to the N terminus of the B7S3 native sequence, both B7S3S and B7S3L were expressed on the membrane of 293 cells. These studies reveal that both short and long forms are expressed on the cell surface. It is possible at this stage that the surface expression of the short form may be facilitated by other proteins or mechanisms.
In addition to the two forms, we found 10 close homologs of B7S3 within a 2-Mb region on mouse chromosome 4. However, there is only one counterpart on human chromosome 1. The distinct genomic structure of B7 molecule in rodents and humans is not unique to B7S3. We previously reported that human B7-H3 has two isoforms, one of which contains four Ig-like domains (9). This four-Ig B7-H3 isoform represents the major form in most human tissues, although absent in mice. However, the differential expansion of the B7S3 gene in mammalian species is to our knowledge very rare.
The finding of two forms of B7S3, together with its 10 close family members, broadens our understanding of the B7 family negative costimulatory molecules, and likely has implications in immune regulation. The broad expression of B7S3 in lymphoid and nonlymphoid organs suggests its involvement in regulation of immune responses. Much more work needs to be performed in the future to illustrate the physiological function of B7S3 in immune responses and diseases.
| Acknowledgments |
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| Disclosures |
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| Footnotes |
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1 The work is supported by research grants from the National Institutes of Health (to C.D.). Y.Y. and C.B. were recipients of a Howard Hughes Medical Institute predoctoral fellowship, and T.N. was supported by a National Institutes of Health training grant. C.D. is a Cancer Research Institute Investigator and an M. D. Anderson Cancer Center Trust Fellow. ![]()
2 Y.Y. and X.K.L. contributed equally to this work. ![]()
3 Address correspondence and reprint requests to Dr. Chen Dong, Department of Immunology, South Campus Research Building, 7455 Fannin, M. D. Anderson Cancer Center, Houston, TX 77030. E-mail address: cdong{at}mdanderson.org ![]()
4 Abbreviation used in this paper: poly(I:C), polyinosinic-polycytidylic acid. ![]()
Received for publication September 12, 2006. Accepted for publication December 21, 2006.
| References |
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. Immunity 11: 423-432. [Medline]
production. Nat. Immunol. 2: 269-274. [Medline]This article has been cited by other articles:
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