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* Department of Immunohematology and Blood Transfusion and
Department of Medical Microbiology, Leiden University Medical Center, Albinusdreef 2, Leiden, The Netherlands; and
Institute of Biochemistry, Biocenter, Johann Wolfgang Goethe-University, Frankfurt, Germany
| Abstract |
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| Introduction |
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One effective mechanism of MHC class I down-modulation is the impediment of the function of the TAP, which mediates the delivery of intracellular peptides for binding to MHC class I molecules in the endoplasmic reticulum (ER)4 (16). Defects in TAP expression are observed in cancers of diverse origin, including breast, lung, and colon, as well as cervical carcinomas and melanomas (11, 13, 17). Interestingly, dedicated viral proteins that target the peptide transport process have been demonstrated in CMV (US6), HSV (ICP47), gammaherpesvirus 68 (mK3), and varicelloviruses (UL49.5) (18, 19, 20, 21, 22, 23).
Recently, we identified the existence of a unique category of CTL that selectively eradicates cells with MHC class I-processing defects, such as TAP deficiency (24). Normal cells with intact Ag-processing machinery were not recognized. These CTL detect a novel repertoire of peptide Ags that emerges on the surface due to TAP, tapasin, or proteasome impairments. Although the peptides are derived from widely distributed self-proteins, they are not presented by normal processing proficient cells and therefore the immune system considers them as immunogenic neo-Ags (24). We refer to this set of peptides as T cell epitopes associated with impaired peptide processing (TEIPP).
Part of the TEIPP-specific CTL population was restricted by the nonclassical MHC class I molecule Qa-1b. Qa-1b and its functional homolog in the human HLA-E are widely expressed, nonpolymorphic class I molecules and present a conserved repertoire of peptides due to their narrow peptide-binding grooves (25, 26). These nonclassical class I molecules have mainly been studied as ligands for the inhibitory NK receptor CD94/NKG2A; however, it has become clear that the population of CTL comprises TCRs restricted by Qa-1b (27, 28, 29, 30, 31, 32). The findings on Qa-1b-mediated CTL reactivity against TEIPP Ags prompted us to study the presentation of these Ags using an inhibitor of peptide transport. Our attempts were hampered by the fact that the described TAP-inhibiting viral proteins US6, ICP47, and mK3 are ineffective in murine cells (ICP47 and US6) (33, 34, 35, 36) or target MHC class I H chains as well (mK3) (37, 38).
In this study, we demonstrate that the UL49.5 molecule from the bovine herpesvirus 1 (BHV1) inactivates TAP function in mouse cells and we show that this protein is a versatile tool for the study of Ag presentation. Introduction of UL49.5 in mouse colon carcinomas reduced surface display of MHC class I and allowed these tumors to avoid recognition by conventional tumor-specific CTL. We furthermore studied the effect of UL49.5 on the Qa-1b-binding peptide repertoire and found that the presentation of TEIPP Ags was strongly promoted by UL49.5, suggesting that immune-evading viruses might be sensitive to TEIPP-directed CTL immune intervention. Our data suggest that this viral protein might be exploited for preclinical testing of murine TEIPP-directed CTL and for selective expansion of human T cells with equivalent specificity.
| Materials and Methods |
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The tumor cell lines used in this study have been generated by chemical carcinogens in different mouse strains. Colon carcinomas C26 and CC36 were derived from the BALB/c stain and MC38 was derived from the C57BL/6 strain (39). Introduction of the UL49.5 gene from BHV1 was established by retroviral gene transduction with the LZRS vector containing an internal ribosome entry site and GFP, as described before (21). Cells with the highest GFP expression were positively sorted by FACS. Fibrosarcoma cells induced by 3-methylcholanthrene (MCA) were generated in the TAP1/ mouse on a C57BL/6 background (24). TAP1 restoration in this cell line was performed with a retroviral construct encoding the mouse TAP1 gene, as described (24).
CTL clone E/88 recognizes the H-2Ld-binding peptide SPSYVYHQF comprised in an endogenous retroviral gp70 gene product and was provided by Dr. M. Colombo (40). These CTL were restimulated weekly with irradiated C26 tumor cells along with 10 Cetus units of recombinant human IL-2 (Chiron). CTL clone B12i recognizes the H-2Db-derived leader peptide AMAPRTLLL in the context of Qa-1b and was provided by Dr. J. Dyson via Dr. C. Brooks (41). These CTL were generated in B6-Tlaa mice that harbor the Qa-1a allotype and we propagated this line by weekly restimulation with irradiated B6 spleen cells and IL-2. TEIPP-specific Qa-1b-restricted CTL have been described before (24) and were generated by immunization of C57BL/6 mice with syngeneic TAP-deficient, CD80-expressing RMA-S cells and weekly restimulation with a mixture of RMA-S.CD80 cells, CD80-expressing EC7.1.Qa-1b cells, irradiated spleen cells, and IL-2 (24).
All cell lines were cultured in IMDM (Cambrex), supplemented with 8% heat-inactivated FCS (Invitrogen Life Technologies), 2 mM L-glutamine (Valeant Pharmaceuticals), 100 IU/ml of penicillin (Astellas Europe), and 30 µM 2-ME (Merck) at 37°C in humidified air with 5% CO2.
CTL activation assay and flow cytometry
Graded amounts of target cells were incubated with 5 x 103 CTL in round-bottom 96-well plates. After 18 h of coculture, supernatants were measured for IFN-
content using sandwich ELISA, as described before (42).
Surface expression of MHC class I molecules was determined using mouse anti-Qa-1b mAb (clone 6A8; BD Pharmingen) and mouse anti-Ld mAb (clone 28-14-8; BD Pharmingen) followed with allophycocyanin-labeled goat anti-mouse Ig and analyzed on a FACSCalibur machine (BD Biosciences).
Peptide transport assay
Mouse colon carcinoma cells (2.5 x 106 cells/assay) were semipermeabilized with saponin (0.05% (w/v)) in 50 µl of buffer (PBS with 5 mM MgCl2) for 1 min at room temperature. Cells were washed twice with buffer. Peptide transport assays were performed with 0.46 µM fluorescein-labeled peptide (RRYQNSTCfL, N-core glycosylation site underlined) in buffer (total volume of 100 µl/assay) in the presence of 10 mM ATP for 3 min at 32°C. Apyrase (1 U; Sigma-Aldrich) was added to deplete ATP in the control samples. The transport reaction was terminated by addition of 1 ml of stop buffer (PBS with 10 mM EDTA). Cells were then collected by centrifugation and lysed in buffer (50 mM Tris-HCl, 150 mM NaCl, 5 mM KCl, 1 mM CaCl2, 1 mM MnCl2, and 1% Nonidet P-40 (NP-40) (pH 7.5)) for 20 min on ice. The N-core glycosylated peptides were recovered with Con A-Sepharose beads (Sigma-Aldrich) overnight at 4°C. After washing with lysis buffer, peptides were eluted from the Sepharose beads with 200 mM methyl
-D-mannopyranoside and quantified with a fluorescence plate reader (
ex/em = 485/520 nm, POLARstar Galaxy; BMG).
Immunoblotting
Cells (5 x 106 cells) were lysed in NP-40 lysis buffer (1% NP-40 in 50 mM Tris-HCl, 50 mM NaCl, and 5 mM MgCl2 (pH 7.4)) and mixed with SDS sample buffer without boiling. Proteins were separated by SDS-PAGE and transferred to nitrocellulose membranes (Schleicher & Schuell Microscience). Membranes were saturated with skimmed milk powder (2% w/v) and then probed with a
-actin-specific Ab (Sigma-Aldrich), a mouse TAP2-specific serum (TAP2.688, a gift from Dr. F. Momburg, German Cancer Research Center, Heidelberg, Germany), or a mouse TAP1-specific mAb (clone SC-11465; Santa Cruz Biotechnology). After washing with TBS (0.1% Tween 20 in PBS), bound primary Abs were detected using peroxidase-conjugated Abs: goat anti-mouse Ig (Southern Biotechnology Associates), goat anti-rabbit Ig (Southern Biotechnology Associates), and rabbit anti-goat Ig (DakoCytomation), respectively. After washing with TBS, peroxidase activity was visualized by chemiluminescence imaging (Lumi-Imager F1; Roche).
| Results |
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We previously reported that the BHV1-derived molecule UL49.5 is accountable for the inactivation of TAP through inducing conformational changes and active breakdown of this peptide transporter (21). These studies were performed in human cell lines. In this study, we introduced UL49.5 in cells of mouse origin to examine whether this protein also inactivates mouse TAP. Expression of UL49.5 resulted in marked reduction of MHC class I surface display, irrespective of the MHC haplotype or the tissue origin of the cells (H-2b, H-2d, and H-2k) (Fig. 1A and data not shown). These findings suggested that UL49.5, in addition to bovine and human TAP, also inhibits peptide transport by mouse TAP.
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Finally, the influence of the TAP inhibition on the processing and presentation of a characterized peptide epitope was evaluated. The surface presentation of the Ld-binding peptide SPSYVYHQF was determined using a peptide-specific CTL clone (40). This peptide is derived from an endogenous tumor Ag that is expressed in colon carcinomas (40). IFN-
release by the CTL was measured upon coincubation with the Ld-expressing colon carcinoma cell lines C26 and CC36 expressing UL49.5 or a control construct. Four to six times more UL49.5-positive target cells were needed to reach similar IFN-
levels, showing that UL49.5-mediated inhibition of TAP has functional consequences for Ag presentation to CTL (Fig. 1C). Collectively, these data show that the BHV1 UL49.5 protein inhibits peptide transport by TAP in mouse cells.
Inactivation of TAP is exerted through degradation
Our previous studies in human cells revealed that UL49.5 inactivates TAP via two mechanisms. The binding of UL49.5 to TAP results in a translocation-incompetent state of the transporter complex. Ultimately, UL49.5 mediates the degradation of both TAP subunits via the proteasome (21). UL49.5 breakdown coincides in this process. This mechanism is clearly different from that of other viral proteins that disturb the peptide transport process. To determine whether mouse TAP1 and TAP2 are similarly destabilized by UL49.5, we examined their steady-state levels in immunoblots (Fig. 2). Reduced levels of both TAP1 and TAP2 were observed in the cells that expressed UL49.5 compared with their counterparts (Fig. 2), indicating that UL49.5 destabilizes both subunits. A comparable decrease was observed in all three colon carcinoma cell lines analyzed, explaining the observed general reduction in MHC class I display at the cell surface (see Fig. 1A). These results are in line with our previous findings in human cells and argue that UL49.5 interacts with human and mouse TAP1/TAP2 heterodimers at a region that is structurally homologous.
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To date, UL49.5 is the first protein that can efficiently inhibit TAP function in multiple species, including mouse. We anticipate that this feature of UL49.5 will make it a very suitable research tool for application in diverse mouse systems of Ag processing and presentation. We examined the influence of UL49.5 on the peptide repertoire that is presented by the nonclassical class I molecule Qa-1b. We analyzed the Qa-1b-mediated presentation of a TAP-dependent leader peptide (AMAPRTLLL) that is derived from the classical MHC class I molecule H-2Db (43) and the recently determined TEIPP peptides (24) using Qa-1b-restricted CTL clones. TEIPP represents a novel set of CTL epitopes that are selectively presented by cells with Ag-processing defects, such as TAP-deficient tumors (24).
MCA-induced fibrosarcoma cells from a TAP1/ mouse failed to trigger AMAPRTLLL-specific CTL (Fig. 3, left panel). Gene transfer of mouse TAP1 restored the presentation of this peptide, whereas IFN-
treatment in addition to TAP1 expression further augmented the CTL reactivity (Fig. 3, left panel). In contrast, Qa-1b-restricted CTL with TEIPP specificity were activated by the TAP-deficient variant and TAP restoration decreased the CTL response (Fig. 3, right panel). Promotion of Ag processing by pretreatment with IFN-
resulted in even lower CTL responses. This pattern of CTL recognition is in line with our previous results on H-2Db- and H-2Kb-restricted TEIPP CTL, as target cells with impaired Ag processing efficiently stimulate TEIPP CTL (24). Thus, these data on genetic TAP-deficient cells revealed opposing requirements of these two Qa-1b-presented peptides for the intracellular processing machinery, in that the leader peptide AMAPRTLLL depends on TAP function and TEIPP peptides benefit from TAP deficiency.
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Next, we analyzed Qa-1b-mediated Ag presentation by the three TAP-positive colon carcinoma cell lines (C26, CC36, and MC38, see Fig. 2). All three cell lines display the same Qa-1 allele (Qa-1b), although they are derived from different mouse strains (BALB/c and C57BL/6) (39). Qa-1 genes display very limited polymorphism; in fact, only two different allele families have been described thus far (44). This allowed us to use the same Qa-1b-restricted CTL clones for the analysis of the Qa-1 peptide repertoire. In accordance with the TAP1-deficient fibrosarcoma experiments (Fig. 3), the recognition by the AMAPRTLLL peptide-specific CTL was clearly decreased upon expression of UL49.5 (Fig. 4A). The TEIPP-specific CTL did not respond against the parental C26, CC36, or MC38 cells (Fig. 4B), suggesting that the TAP function in these cells precluded the presentation of TEIPP epitopes. Interestingly, UL49.5 expression induced the emergence of TEIPP at the cell surface of the colon carcinomas and strongly promoted activation of the TEIPP-specific T cells (Fig. 4B). These findings imply that, in the absence of functional TAP, peptides other than MHC class I-derived leader peptides substitute the Qa-1b-binding peptide pool. Overall, Qa-1b surface levels were not affected by the UL49.5 protein (data not shown), underlining the notion that UL49.5 selectively attacks the Ag-processing machinery and does not limit the availability of Qa-1 H chains.
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strongly enhances the class I Ag-processing and presentation machinery. We assessed whether pretreatment of IFN-
would reduce the UL49.5-mediated display of TEIPP Ags by Qa-1b. This is of interest because the UL49.5 protein seems to block peptide transport and subsequent presentation only partially (Fig. 1, B and C, and compare Fig. 3 with Fig. 4A). Treatment of CC36 cells with IFN-
resulted in improved presentation of the TAP-dependent AMAPRTLLL peptide (Fig. 5, left panel). Similar CTL recognition patterns were observed against targets that had not been pretreated with IFN-
(Fig. 5, left panel). The impact of UL49.5 was comparable with that of nontreated target cells. Strikingly, the reactivity of TEIPP-specific CTL was not affected by IFN-
treatment of the target cells, indicating that UL49.5 function was sufficient to counteract the augmented Ag processing. Together, our data show that the varicellovirus-derived protein UL49.5 is an efficient TAP inhibitor in mouse cells and may be exploited as a versatile tool for the induced presentation of TEIPP Ags.
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| Discussion |
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Interestingly, each herpesvirus that inactivates TAP employs this stealth technology through entirely different mechanisms. ICP47 is a small, soluble cytosolic protein that acts as a high-affinity competitor for peptide binding to TAP and thereby competes for transport of peptide ligands (48). US6 binds to TAP in the ER lumen and prevents ATP binding through a conformational change (49). The mK3 protein carries a cytoplasmic RING finger that catalyzes ubiquitination of TAP (38). Finally, the UL49.5 protein that we recently identified efficiently blocks peptide transport by inducing conformational changes of TAP and by simultaneously shuttling TAP to the proteasome for degradation (21). Whereas the first two viral proteins exhibit very poor activity on mouse TAP (33, 34, 35, 36), we show in this study that UL49.5 exerts its function in mouse cells, in addition to human and bovine cells (Fig. 1 and Ref. 21). Apparently, the TAP molecules of these species display enough structural similarity to allow for binding of UL49.5, but not ICP47 or US6. Although the UL49.5-mediated decrease in TAP protein appeared to be less dramatic in mouse cells than in human cells (Fig. 2 and Ref. 21), the functional blockade of TAP activity appears comparable (Fig. 1 and Ref. 21). A plausible explanation for this paradox is provided by our previous findings that deletion mutants of UL49.5, which fail to shuttle TAP to the proteasome, still block TAP transport through conformational changes of TAP (21). Interestingly, UL49.5 proteins encoded by two other varicelloviruses (pseudorabies virus and equine herpesvirus 1) also efficiently inactivate TAP function in the absence of strong TAP breakdown (D. Koppers-Lalic and E.J.H.J. Wiertz, unpublished observations).
Qa-1b and its human functional homolog HLA-E belong to the group of nonclassical MHC class I molecules and have a wide tissue distribution (32). The main differences with the classical class I proteins are the low expression levels, the very limited polymorphism in the population, and the limited variability in the peptide repertoire they bind (32).
The peptide-binding groove of Qa-1b and HLA-E seem to be optimized for accommodation of leader peptides derived from classical MHC class I molecules, which are, in the mouse, encoded by H-2D genes (50), although some viral and bacterial peptides have been shown to bind as well (28, 29, 30, 51, 52). Qa-1b-restricted CTL responses against several intracellular pathogens have indeed been documented (27, 28, 29, 30, 31), demonstrating a physiological role for this nonclassical class I molecule in the CTL immune defense of the host. Strikingly, knowledge on Qa-1b-mediated presentation of endogenous self-peptides is largely focused on the class I-derived leader peptides. Our finding that the surface presentation of this AMAPRTLLL peptide depends on transport activity of TAP (Figs. 3 and 4) is in agreement with the previous work of others (53), demonstrating that even some leader peptides, which route proteins to the ER, need to gain access to the peptide-loading complex via TAP. Importantly, in this article we show that impairment of the processing of this leader peptide results in the presentation of other self-peptides that normally do not make it to the surface. Peptide elution studies from cells deficient for class I leader peptides have revealed that a Hsp60-derived peptide can substitute for binding to Qa-1b (54). The fact that our TEIPP-specific Qa-1b-restricted CTL were not reactive against this mammalian Hsp60-derived peptide (data not shown) indicates that the Qa-1b-binding peptide pool is broader than initially postulated. The observation that Qa-1b surface levels are relatively unaffected by TAP1 deficiency (55) underscores the notion that other peptides can compensate for the absence of the class I leader peptide. Identification of this alternative peptide repertoire will enable development of immunotherapeutic approaches for immune-evading viruses and processing deficient tumors. Importantly, due to the very limited polymorphism of Qa-1b/HLA-E in the population (56), identified peptides could be population-wide Ags, independent of the differences in HLA typing. Our future research is now geared toward the elucidation of these yet-unknown TEIPP peptides that are presented by Qa-1b and the exploitation of the UL49.5 inhibitor that greatly facilitates this type of study.
In conclusion, our data demonstrate that TAP deficiency leads to the presentation of Qa-1-binding CTL epitopes that are normally not displayed at the cell surface, suggesting that CTL with this novel specificity might be recruited for the immune control of tumors or viruses that use immune evasion strategies. Furthermore, we propose that UL49.5 can be exploited as a versatile tool for the inactivation of peptide transport by TAP in preclinical models for immune silencing, e.g., to prevent CTL destruction against transplants, or immune intervention, e.g., to expand CTL populations with TEIPP specificity to target tumor-immune escape variants.
| Acknowledgments |
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| Disclosures |
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| Footnotes |
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1 This project was financially supported by the Dutch Cancer Society (Grant UL2002-2709 to T.v.H. and S.L.), the Socrates European Student Exchange Program (to C.P.), and the Dutch Diabetes Research Foundation (to D.K.L). ![]()
2 Address correspondence and reprint requests to Dr. Thorbald van Hall, Department of Immunohematology and Bloodtransfusion, Leiden University Medical Center, Albinusdreef 2, Leiden, The Netherlands. E-mail address: T.van_Hall{at}lumc.nl ![]()
3 Current address: Department of Pathology, Addenbrookes Hospital, University of Cambridge, Cambridge CB2 2QQ, U.K. ![]()
4 Abbreviations used in this paper: ER, endoplasmic reticulum; TEIPP, T cell epitopes associated with impaired peptide processing; BHV1, bovine herpesvirus 1; MCA, 3-methylcholanthrene; AP, alkaline phosphatase. ![]()
Received for publication July 17, 2006. Accepted for publication August 22, 2006.
| References |
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-herpesvirus-68 MK3 protein causes TAP degradation independent of MHC class I heavy chain degradation. Eur. J. Immunol. 35: 171-179. This article has been cited by other articles:
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B. Chambers, P. Grufman, V. Fredriksson, K. Andersson, M. Roseboom, S. Laban, M. Camps, E. Z. Wolpert, E. J.H.J. Wiertz, R. Offringa, et al. Induction of Protective CTL Immunity against Peptide Transporter TAP-Deficient Tumors through Dendritic Cell Vaccination Cancer Res., September 15, 2007; 67(18): 8450 - 8455. [Abstract] [Full Text] [PDF] |
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