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* Vascular Biology Laboratory, Department of Neurosurgery, St. Lukes Roosevelt Hospital Center, New York, NY 10025;
Department of Medicine, College of Physicians and Surgeons, Columbia University, New York, NY 10032;
Institute of Molecular Physiology and Genetics, Slovak Academy of Sciences, Bratislava, Slovak Republic; and
Department of Immunobiology, Mount Sinai Medical Center, New York, NY 10029
| Abstract |
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| Introduction |
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In a previous study, we reported that a cell cycle-dependent kinase, cdc2, phosphorylates IP3R1 in vitro and in vivo (3). This observation is consistent with previous reports that IP3-gated calcium release is modulated during the cell cycle (18, 19, 20). In the present study, we show that cyclins/cyclin-dependent kinases (cdks) directly interact with and modulate IP3-gated Ca2+ release via phosphorylation. In addition, we report that cyclin B1 (CyB1) interacts directly with IP3R1 through cyclin-binding motifs. These results provide a novel mechanism by which cyclins/cdks regulate IP3-gated Ca2+ release during cell cycle progression.
| Materials and Methods |
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Rats were obtained from Sprague-Dawley and maintained in a pathogen-free facility of the St. Lukes Roosevelt Hospital Center. The facility is fully accredited by the American Association for Accreditation of Laboratory Animal Care.
Cell culture and reagents
Jurkat cells (human leukemic T cell line, clone E6.1; American Type Culture Collection) were cultured in RPMI 1640 medium containing 10% FCS and 100 U/ml penicillin and streptomycin. The cells were split every 2 days to maintain log-phase growth. Antiserum to IP3R1, raised against a synthetic peptide of the human IP3R1 sequence (aa 18291848), was purchased from Alexis Biochemicals. In some experiments, anti-IP3R1 was also used (a gift from G. Mignery, Loyola University, Chicago, IL) (21). The p13-Suc-1-agarose beads and mAb to cdc2 were obtained from Oncogene Biosciences, and the protease inhibitor mixture was from Sigma-Aldrich. The cdc2/CyB and PHA were obtained from Calbiochem.
Spleen cell preparation and stimulation
Spleen cells were harvested from Sprague-Dawley rats and were stimulated with and without PHA for 24 h. Uninduced and PHA-induced cells were lysed in lysis buffer (50 mM Tris-HCl (pH 8.0), 120 mM NaCl, 1 mM EDTA, 0.1 mM NaF, 1 mM Na3VO4, 10 mM
-glycerophosphate, 1 mM DTT, 0.5 mM PMSF, 1 µg/ml aprotinin, 1 µg/ml leupeptin, 10 µg/ml soybean trypsin inhibitor, and 0.5% Nonidet P-40 (v/v)). Immunoprecipitation was performed using these lysates and anti-IP3R1 Ab, followed by immunoblotting with Abs against IP3R1, cdc2, and CyB, as described (8).
Generation of phosphospecific Abs to IP3R1
Polyclonal Abs were raised in rabbits against two phosphopeptide sequences (MLKIGTS*PVKEDKEA and DPQEQVT*PVKYARL) within murine IP3R1 that contain the Ser421 and Thr799 phosphorylation residues, respectively. The polyclonal Abs were affinity purified with two cycles of purification by initially passing through nonphosphorylated peptides and then the appropriate phosphorylated peptides. The titer and specificity of the phosphospecific Abs were determined by ELISA and immunoblotting.
Western blotting, immunoprecipitation, and in vitro kinase reactions
Cell numbers were calculated, equalized across treatment groups, and lysed in ice-cold lysis buffer containing 0.5% Nonidet P-40, 25 mM HEPES (pH 7.4), 150 mM NaCl, 1 mM EDTA, 1 mM Na3VO4, and protease inhibitors. Cell lysates were centrifuged at 13,000 x g in a microcentrifuge, and the supernatants were subjected to immunoblotting and immunoprecipitation or incubation with Suc-1 coupled to agarose beads (22, 23). The membranes were blocked in TBST (20 mM Tris-HCl (pH 7.4), 0.9% NaCl, and 0.05% Tween 20) containing 5% nonfat dried milk for 1 h, followed by incubation with primary Abs. After extensive washing, the membranes were incubated with their respective secondary Abs (goat anti-rabbit IgG, BD Pharmingen; or goat anti-mouse IgG, Santa Cruz Biotechnology) conjugated to HRP in TBST containing 5% nonfat dried milk. The immunoblots were analyzed using the ECL detection system (Amersham). Immunoprecipitations were performed with the anti-IP3R1 Ab, as described (8), and the immune complexes were washed three times with ice-cold buffer containing 25 mM HEPES (pH 7.4), 150 mM NaCl, 1 mM Na3VO4, 0.5% Nonidet P-40, and a mixture of protease inhibitors containing 4-(2-aminoethyl) benzenesulfonyl fluoride, pepstatin A, E64, bestatin, leupeptin, and aprotinin (Sigma-Aldrich). The kinase assays were performed at 30°C for 10 min in 25 µl of a solution containing 50 mM Tris (pH 7.4), 10 mM MgCl2, 1 mM DTT, and 10 µCi of [
-32P]ATP with and without exogenous cdc2/CyB. Phosphoproteins were separated by SDS-PAGE and detected by autoradiography, as described (3, 8).
Generation of wild-type and cdc2phosphorylation-deficient mutant GST proteins and pull-down assays
Generation of pGEX constructions that encode GST fusion proteins and the purification of the expressed proteins have been described previously (24). The regions corresponding to residues 375473, 753886, and 1900 of mouse IP3R1 were amplified by PCR and cloned into the BamHI and EcoRI sites of pGEX2T (Amersham Biosciences). S421A and T799A mutations were introduced using the QuikChange mutagenesis kit (Stratagene), and mutations were confirmed by sequencing. GST fusion constructs containing residues 375473 (IP3R1/375473) and 753886 (IP3R1/753886) as well as the mutant constructs (S421A and T799A) were expressed in (Escherichia coli) JM101 (Stratagene). The proteins were induced from 15 ml of cell culture (A600 = 0.5) with 0.1 mM isopropyl-
-D-thiogalactopyranoside at 37°C for IP3R1/375473 and at 12°C for IP3R1/753886 fusion proteins. Fusion proteins were purified on glutathione-agarose beads, per the manufacturers instructions (Amersham Biosciences), and washed three times in PBS containing 1% Triton X-100 to remove nonspecifically bound proteins. For generating the cyclin binding-deficient IP3R1 mutants, we replaced arginine (R) in the cyclin-binding motif, RXL, with glycine (G). For the pull-down assays, wild-type and mutant proteins of fragments 375473 and 753886 were bound to sf-9-purified CyB1, washed extensively, and resolved on 10% SDS-PAGE gels.
Binding studies with Suc-1-agarose
p13-Suc-1-agarose was incubated with cycling Jurkat cell lysates on ice for 2 h. The resin was washed three times in lysis buffer (20 mM Tris-HCl (pH 7.4), 1% Triton X-100, plus a mixture of protease inhibitors containing 4-(2-aminoethyl) benzenesulfonyl fluoride, pepstatin A, E64, bestatin, leupeptin, and aprotinin). Proteins bound to the immobilized Suc-1 were released by boiling the agarose resin in SDS-PAGE sample buffer for 5 min, followed by separation via SDS-PAGE. The proteins were transferred to nitrocellulose and immunoblotted with their respective indicated Abs.
IP3-binding assay
The IP3-binding assay was performed using the IP3R1 (1900) fragment, as described (3). The soluble protein (30 µg) was incubated with 9.6 nM tritiated IP3 in 100 µl of binding buffer for 10 min at 4°C. The mixture was then added to 4 µl of
-globulin (50 mg/ml) and 100 µl of a solution containing 30% (w/v) polyethylene glycol 6000, 50 mM Tris-HCl (pH 8.0 at 4°C), 1 µM 2-ME, and 1 mM EDTA. After incubation at 4°C for 5 min, the protein-polyethylene glycol complex was collected by centrifugation at 10,000 x g for 5 min at 2°C. The pellets were dissolved in 180 µl of Solvable (DuPont NEN). After neutralization with 18 µl of acetic acid, the radioactivity was measured in 5 ml of Atomlight (DuPont NEN) with a liquid scintillation counter. The specific binding was calculated by subtracting the nonspecific binding (in the presence of 2 µM IP3) from the total binding measurement.
45Ca release assay
Rat brain microsomes were isolated according to Michikawa et al. (25) and then resuspended in 10% sucrose, 1 mM 2-ME, and 10 mM MOPS/Tris-HCl (pH 7.0) (3.3 mg protein/ml), diluted with an equal volume of 300 mM KCl, and 2 µl of 45Ca (sp. act., 1.85 Gbq/mg; Amersham Biosciences) was then added. After incubation for 160 min on ice, the samples were adjusted to 2 mM MgCl2 and 0.2 mM Na2ATP. The samples were incubated with 60 U/ml cdc2, 60 µM roscovitine, or 5 µM digitonin for 10 min at room temperature, and were then diluted with 3 vol of 150 mM KCl, 10 mM EGTA, and 20 mM Tris-HCl (pH 7.8). Ca2+ release was induced by 1 µM IP3, and was measured after 1 min by adding 6 µl of stop solution (150 mM KCl, 10 mM EGTA, 20 mM Tris-HCl, and 1 mM La (pH 7.8)).
| Results |
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300 kDa that comigrated with IP3R1 during SDS-PAGE (Fig. 2A). Taken together, these data suggest that cdc2/CyB interacts directly or indirectly with IP3R1. To further examine the nature of the interaction between cdc2/CyB and IP3R1 during quiescent and proliferative cell stages, we analyzed immune complexes of IP3R1 from rat primary lymphocytes stimulated with and without PHA. PHA induces rapid proliferation of lymphocytes. IP3R1 immune complexes from the PHA-stimulated cells contained cdc2 and CyB, whereas the immune complexes from nonproliferating quiescent cells contained no detectable cdc2 or CyB, even though the IP3R1 level was equivalent to that in the PHA-stimulated population (Fig. 2, CE). These results indicate that IP3R1 interacts with cdc2/CyB1 in normal primary lymphocytes after activation and that the interaction does not occur in quiescent cells due to a lack of CyB1 expression at the G0/G1 stages of the cell cycle (26). Several studies have demonstrated the presence of cyclin-binding motifs (RXL) in target proteins, thereby facilitating cyclin/cdk/target protein interactions (27, 28). Our primary sequence analysis revealed three putative CyB-binding motifs (391RHL, 441RDL, and 871RNL) in IP3R1 that are proximal to the cdc2 phosphorylation site(s). To investigate whether these sites are involved in the establishment of the CyB/cdc2/IP3R1 complex, we incubated GST fusion proteins encoding wild-type and mutant IP3R1 phosphorylation site fragments bound to glutathione-Sepharose with purified CyB and cdc2 proteins. Nonspecifically bound proteins were washed extensively, and the bound proteins were eluted, size fractionated, and probed with either anti-CyB1 or anti-cdc2 Abs in immunoblots. Although CyB1 interacted with both wild-type and phosphorylation-deficient IP3R1 fragments (375473 and 753886; Fig. 2F), CyB1 bound very poorly to the same IP3R1 fragments, in which three of the arginine (R) residues in the CyB-binding motif, RXL, were changed to glycine (G) (Fig. 2F). Taken together, these results suggest that CyB1 binding to IP3R1 is dependent on Arg391, Arg441, and Arg871.
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-D-thiogalactopyranoside. Using this approach, we showed that cdc2 phosphorylation of this fusion protein increased IP3 binding by 3-fold, which was attenuated by roscovitine (3). IP3 binding to the S421A mutant was comparable to wild-type IP3R1. In contrast, the T799A mutation significantly reduced IP3 binding (p < 0.05). Mutation of both phosphorylation residue sites severely inhibited IP3 binding and is highly significant (p < 0.001) (Fig. 3A). Thus, the data in Fig. 3A show that the lack of phosphorylation at both of these sites negatively impacts IP3 binding. To determine the independent effect of cdc2/CyB-mediated phosphorylation at Ser421 and Thr799 on IP3 binding, we used wild-type and phosphorylation-deficient IP3R1 mutants (1900), in which these potential phosphorylation sites were changed to alanine. The IP3-binding experiments were performed with increasing concentrations of unlabeled cold IP3. Specific IP3 binding is shown with wild-type (Fig. 3B), S421A (Fig. 3C), T799A (Fig. 3D), and S421A + T799A mutants (Fig. 3E). Our results show that IP3 binding to the wild type is significantly increased upon phosphorylation by cdc2/CyB complex (Fig. 3B; p < 0.05). Although S421A mutation resulted in reduced IP3 binding after phosphorylation as compared with wild-type IP3R1 (Fig. 3, B and C; p < 0.05), T799A mutation completely abrogated the effect of phosphorylation on IP3 binding (Fig. 3D; p < 0.05). Consistent with these findings, we also found that IP3 binding is severely impaired in the phosphorylation-deficient double mutant, S421A + T799A as compared with wild-type IP3R1 (Fig. 3, B and E; p < 0.001).
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| Discussion |
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Previous approaches used to determine cdc2/Cy-substrate interactions include p13-Suc-1 affinity columns, immunoprecipitation, and pull-down assays (22, 23). To detect the IP3R1/cdc2/CyB complex, we used a cdc2 affinity resin, p13-Suc-1-agarose. Incubation of cell lysates with this Suc-1 resin yielded an additional protein other than cdc2 migrating at
300 kDa that reacted with the anti-IP3R1 Ab. A lack of IP3R1 from lysates incubated with agarose beads alone suggests a specific association between IP3R1 and cdc2, although it is possible that a nonspecific interaction between IP3R1 and the Suc-1 resin could have occurred. However, this is unlikely because this association is observed only in proliferating lymphocytes after PHA stimulation and not in quiescent cells. Alternatively, lack of expression of CyB1 in quiescent cells could also have accounted for the absence of the IP3R1/CyB1/cdc2 complex (26). The data suggest the latter possibility, and we propose that CyB1 expression is critical for its association with IP3R1. Moreover, the CyB1 interaction in normal lymphocytes also shows that the finding is not unique to transformed Jurkat cells, whose growth is less dependent on growth factors.
To further determine whether IP3R interact directly with CyB1, we exploited IP3R1 fragments containing putative cyclin binding and phosphorylation sites. We mixed these fragments with purified CyB1 and assessed binding. CyB1 binding to wild-type as well as phosphorylation-deficient mutants suggests that CyB1 interacts with IP3R1 at residues distal to the phosphorylation sites. The lack of CyB1 interaction with Cy binding-deficient mutants suggests that CyB1 binding to IP3R1 is dependent on Arg391, Arg441, and Arg871. Similar interactions between cyclins and target proteins via RXL motifs have been reported (27, 28, 30). The finding that CyB1 interacts with IP3R1 suggests that it may have a role in regulating IP3R function during the cell cycle. For instance, CyB1 may target IP3R1 via a cyclin-specific interaction with its kinase partner and thereby influence the subcellular localization of phosphorylation (28). Subcellular localization may alter spatio-dynamic calcium changes and keep complexes sequestered from improper substrates, or expose the complexes to activators or inhibitors that are localized to specific compartments (31, 32).
IP3 binding is critical not only for the activation of IP3R channels, but also for their inactivation (16). The N-terminal 734 residues of IP3R1 (T734) expressed in E. coli exhibited IP3-binding characteristics similar to those of the native cerebellar IP3R. Further analyses of the N-terminal 734 residues of IP3R1 showed that a 353-residue sequence (residues 226578) constitutes an IP3 binding region. To determine the consequences of IP3R phosphorylation at specific sites, we generated phosphorylation-deficient mutants as GST fusion proteins to elucidate the effect of phosphorylation of IP3R proteins on IP3 binding. Interestingly, significantly reduced IP3 binding was measured for the T799A mutant; this threonine residue is conserved in IP3R1 and IP3R3. Thus, this phosphorylation at Thr799 may induce a conformational change in these receptors that facilitates IP3 binding. By contrast, the S421A mutation had a relatively minimal effect. Given that Ser421 is within the IP3 binding region, this result is contrary to our expectation that Ser421 phosphorylation would modulate IP3 binding due to conformational changes. These results suggest that cdc2 phosphorylation modulates Ca2+ signaling through IP3 binding and that phosphorylation at residue Thr799 is critical for this function. Mutation analysis revealed that 10 basic residues scattered throughout this sequence are important for IP3 binding and that these residues are conserved among all members of the IP3R family (29). Of these 10 residues, three are critical, and one is known to be involved in IP3-binding specificity (33). Our results provide further understanding of the regulatory site(s) present outside of the IP3 binding region.
The biochemical mechanisms that regulate intracellular Ca2+ signals in vivo are not yet completely understood. We also investigated the effect of phosphorylation on IP3-gated Ca2+ release. Ca2+ transients occur during the G2-M phase transition and the metaphase-anaphase boundaries of the cell cycle; moreover, CyB1/cdk activity controls the generation of sperm-triggered Ca2+ oscillations in oocytes during the cell cycle (18, 19, 34). We used brain microsomes because they express only IP3R1. Indeed, IP3R1-gated Ca2+ release is enhanced after phosphorylation of IP3R1 by cdc2/CyB complex. However, it is still possible that kinases other than cdc2/CyB may also modulate Ca2+ mobilization during the cell cycle. For instance, cell cycle-dependent Ca2+ changes may also be modulated via phosphorylation of IP3R by MAPK and/or Src kinases, which are active during the mitotic phase of the cell cycle. Protein phosphorylation is known to regulate numerous cellular functions, including apoptosis. Given that phosphorylation at Thr799 is important for increasing the affinity of IP3R1 for IP3, the increased phosphorylation at Thr799 after HIV infection suggests that HIV may selectively manipulate IP3-gated Ca2+ signaling.
In this study, we demonstrated that cdc2 phosphorylation alters certain IP3R properties and increases IP3-gated Ca2+ release. Given that cells deficient in IP3R fail to undergo activation-induced apoptosis (4, 6, 7) and that there is good correlation between increased cdc2/CyB activity and apoptosis in several human disorders, inappropriate and sustained phosphorylation of IP3R may result in higher cytoplasmic Ca2+ concentrations that may be detrimental to cell survival (35). This viewpoint is further supported by evidence that breast cancer resistance correlates with inactivation of cdc2/CyB activity (36, 37). Indeed, our preliminary studies indicate that phosphorylation-deficient mutant cells are relatively resistant to activation-induced apoptosis (data not shown).
The identification of apoptosis as the mechanism of cell demise/clearance under both normal physiological and pathological conditions has led to a growing interest in delineating the biochemical and molecular controls underlying this important process. For example, most self-reactive immature B cells having elevated cytoplasmic Ca2+ undergo apoptosis during development (i.e., clonal deletion) to establish immunological tolerance (38, 39, 40), whereas HIV infection causes profound immunological defects in afflicted patients, with high levels of immune activation and apoptosis of CD4+ T cells. The increased frequency of apoptosis of CD4+ T cells in HIV patients and serious perturbations of the cell cycle are associated with increased CyB1 expression and p34 cdc2 activity (41, 42, 43, 44, 45, 46, 47, 48). It is therefore likely that an abnormal relationship between T cell activation/proliferation and the occurrence of apoptosis may play a significant role in lymphocyte depletion in HIV patients. Syncytia (fusion of cells expressing the HIV-1-encoded Env gene with cells expressing the CD4/CXCR4 complex) occur upon sequential activation of CyB-cdk1, mammalian target of rapamycin, and p53; cdk1 inhibition by roscovitine/olomoucine prevents syncytial cell death elicited by HIV-1 infection of primary CD4 lymphoblasts (41). The neurotoxin protein HIV-Tat activates IP3-gated calcium stores in conferring neuronal cell death, which in turn causes AIDS-related dementia complex (42). HIV infection also causes IP3R1 to associate with the HIV-1 Nef protein, which promotes the early viral life cycle (43, 44, 45). These findings suggest the possible involvement of IP3R-mediated Ca2+ signaling in HIV pathogenesis. A detailed examination of IP3R phosphorylation pathway using blocking peptides may help to develop new strategies for treating HIV infection.
In summary, we present evidence that cdc2/CyB interacts with and phosphorylates IP3R, and that this phosphorylation increases Ca2+ release by increasing the binding affinity of IP3 for IP3R. The cdc2-mediated phosphorylation of IP3R, increased IP3 binding, and IP3R-mediated intracellular Ca2+ release are logical steps to explain the relationship between increased cdc2 activity and increased sensitivity to activation-induced apoptosis in many human disorders, including HIV. Because the cdc2/CyB complex is also necessary for the cell cycle, we suggest that other players, such as phosphatases and cy/cdk inhibitors, play an important role in regulating IP3R phosphorylation and the intracellular Ca2+ transients during the G2/M transition.
| Acknowledgments |
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| Disclosures |
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| Footnotes |
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1 This work was supported by the New Investigator Development Award and Grant-In-Aid from the American Heart Association, Vascular Biology Fund, and a pilot award from the American Cancer Society. ![]()
2 X.L. and K.M. contributed equally to this work. ![]()
3 Address correspondence and reprint requests to Dr. Thottala Jayaraman, Vascular Biology Laboratory, Department of Neurosurgery, St. Lukes Roosevelt Hospital Center/Columbia University, New York, NY 10025. E-mail address: tj56{at}Columbia.edu ![]()
4 Abbreviations used in this paper: IP3, inositol 1,4,5-trisphosphate; cdk, cyclin-dependent kinase; CyB, cyclin B. ![]()
Received for publication March 22, 2005. Accepted for publication August 12, 2005.
| References |
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. Nature 404:197.-201. [Medline]
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