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National Institute for Medical Research, Division of Molecular Immunology, London, United Kingdom
| Abstract |
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| Introduction |
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-globin LCRs have led to the proposal that LCRs are involved in the establishment and/or maintenance of an open chromatin configuration by overcoming heterochromatin-mediated silencing (1, 2, 3, 4). The hCD2 gene is expressed in all T cells and thymocytes. Studies using transgenic mice have established that a 28.5-kb fragment containing the human CD2 gene and 5 kb of 5'-flanking and 9 kb of 3'-flanking sequences carries all the necessary information for correct tissue-specific expression (5). Within this fragment, a promoter together with a classical enhancer that is located 3' to the gene have been identified (6). The enhancer coincides with a strong DNase I-hypersensitive site (HSS) called HSS1. Two additional HSSs (HSS2 and HSS3) with no enhancer activity were also identified within the 2-kb 3'-flanking region (2).
Deletion analysis has shown that the 2-kb 3'-flanking region of the hCD2 locus, which contains these clusters of HSSs, is sufficient for hCD2 LCR function (2, 5). Transgenic lines carrying the hCD2 minigene, in which the HSS3 is either partially deleted or omitted, are subject to position effect variegation (PEV) when the transgene is integrated in transcriptionally repressive regions, such as those found in centromeres. PEV is a phenomenon observed with genes that are in close proximity to repressive heterochromatin locations. In such cases heterochromatin is thought to spread to a varying degree in different cells of the same lineage. Consequently, in some of the cells the gene is spared heterochromatinization, and therefore it is expressed, whereas in cells in which the gene has been engulfed by heterochromatin it is silenced. This effect in our PEV model is apparently transgene copy number and orientation independent (2). Furthermore, it appears that the decision on whether to express a hCD2 transgene with a disabled LCR is a stochastic one, and once made, it is maintained through subsequent cell divisions (4). Very similar observations were made in experiments involving other disabled LCRs (3, 7, 8, 9).
Disabled LCRs reveal their sensitivity to position effects when integrated into heterochromatic regions of the mouse genome (4, 9). Such chromosomal locations induce a mosaic expression pattern, which bears striking similarity to PEV as described in Drosophila and yeast (10). It has been reported that repeats of transgenes in Drosophila can induce heterochromatinization and subsequently PEV (11). Furthermore, multiple copies of a lacZ transgene reporter under the control of the human
-globin LCR also are subject to PEV. However, the latter result should be seen in the light of numerous studies showing that lacZ gene sequences can have an adverse effect on the transcriptional activity of the transgenic locus (12, 13, 14, 15). We have shown previously that multiple copies of a CD2 transgene with a full LCR integrated in the centromere do not variegate, whereas low copy (two to three) integrants of constructs with disabled LCR in the centromere can be severely affected by the surrounding heterochromatin. Conversely, multiple copies of hCD2 with disabled LCR integrated in a favorable chromosomal position do not exhibit variegation (2). Recently, using Cre-loxP technology in our laboratory, we have shown that reducing the transgene copy number in a variegating mouse increased PEV (A. Williams, manuscript in preparation). Thus, there is strong evidence that variegation of hCD2 transgenes is not related to the number of integrated copies.
Recently, high mobility group (HMG) box transcription factor 1 (HBP1), a member of the HMG box family that is expressed highly in the thymus, was shown by us to bind a region in the hCD2 LCR. Deletion of the HBP1 binding site (FT1) from the LCR leads to PEV when the transgene is integrated in heterochromatin regions (9). We proposed at the time that HBP1 might play a direct or indirect role in chromatin opening and in establishing an active locus. A similar role has been attributed to the erythroid-specific erythroid Kruppel-like factor (16), which is essential for adult
-globin gene expression (17, 18) and is involved, via SWI/SNF family members (16), in the remodeling of the
-globin locus into an active structure (19).
HBP1 is a member of the HMG protein family capable of interacting with specific DNA sequences. The DNA specificity is variable among the members, and based on methylation interference assays performed for lymphoid enhancer factor (LEF)-1/T cell factor-1 factor, a consensus heptamer-binding site for sequence-specific HMG boxes (A/T)(A/T)CAAAG was originally proposed (20). Subsequent studies of LEF-1, SRY, SOX-4, and SOX-5 were in agreement with this idea (21, 22, 23, 24). However, different binding sites sharing a TCAT tetranucleotide have been reported for HBP1 (25, 26). Among sites that bind HBP1, the TTCATTCATTCA binding site, found in the hCD2-LCR, appears to have the highest affinity (9).
In this study we investigated the effects of increased levels of HBP1 in overcoming heterochromatin-mediated transgene silencing and in thymocyte development by generating transgenic mice overexpressing HBP1 in thymocytes. Such mice exhibit lower thymus cellularity and have increased numbers of mature CD8 single-positive (SP) cells in the thymus. Using two independent hCD2 variegating transgenic reporter lines, it was found that thymus-specific overexpression of HBP1 in two independent HBP1 transgenic effector lines can lead to an increase in the proportion of thymocytes that fully express the transgenic hCD2 locus, provided the HBP1 binding site is present on the reporter construct.
| Materials and Methods |
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Mice (CBA/Ca and C57BL/10 and (CBA/Ca x C57BL/10) F1) were bred at the National Institute for Medical Research in London. Transgenic mice were generated by injecting DNA constructs into ((C57BL/10/CBA) x (C57BL/10/CBA)) F2 fertilized mouse eggs. The human HBP1 cDNA (9) was put under the control of the p56lck proximal promoter by cloning it by blunt end into the BamHI site of the p1017 vector (gift from Dr. R. Perlmutter, Amgen, Thousand Oaks, CA). The hCD2-1.5 construct has been described previously (2). Transgenic founder animals were identified by Southern blot analysis of DNA from tail biopsies and bred to CBA mice to establish the transgenic lines. Each transgenic line was backcrossed to CBA at least four times. All animals were maintained in specific pathogen-free facilities at the National Institute for Medical Research. Mouse handling and experimental procedures were conducted in accordance with national and institutional guidelines for animal care and use.
Fluorescence in situ hybridization
Metaphase spreads were obtained from transgenic mouse spleen cells cultured for 2 days after LPS stimulation (Sigma-Aldrich; final concentration, 20 mg/ml). The hCD2 DNA probe was labeled and hybridized with the metaphase spreads following procedures previously described (2). Slides were then mounted in Antifade (Vector Laboratories), counterstained with 4',6-diamidino-2-phenolindole, and subsequently examined using a Delta Vision fluorescence microscope. Images were collected with cooled CCD camera (Photometrics) using capture software (Soft WoRx).
Northern blot analysis
Total thymocyte RNA was extracted using TRIzol reagent (Invitrogen Life Technologies) according to the manufacturers instructions. RNA molecules were resolved by agarose gel electrophoresis and transferred onto Hybond-N membranes (Amersham Biosciences) in 20x SSC, 3 M NaCl, and 0.3 M sodium citrate; pH 7.0. Membranes were hybridized to a probe containing the open reading frame of human HBP1 in 3x SSC, 0.1% SDS, 10x Denhardts solution, 10% dextran sulfate, and 250 µg/ml denatured salmon sperm DNA at 65°C for 16 h and washed to a final stringency of 0.2x SSC/0.1% SDS at 65°C. As a loading control, the membranes were hybridized to a GAPDH probe as described above.
FACS analysis
T cells from thymus were stained with saturating concentrations of FITC-, PE-, PerCP-, or Tricolor-conjugated Abs in PBS plus 2% FCS-1% BSA at 4°C for 30 min, then washed with PBS and subsequently analyzed using BD Biosciences FACSCalibur and CellQuest programs. The following Abs were used in this study: FITC-anti-mCD8
(YTS169.4), PE-anti-human CD2 (BD Pharmingen), FITC anti-mTCR
-chain (Caltag Laboratories), PerCP-anti-mCD8
(Ly-2; 1/200; BD Pharmingen), allophycocyanin-anti-mCD4 (1/400; BD Pharmingen), and Tricolor-anti-mCD4 (Caltag Laboratories). T cells from the hCD2 nonvariegating line Mg4 and CBA or B10 have been used as positive and negative controls for hCD2 expression, respectively. The experiments shown in Figs. 5 and 6A were performed with a different batch of hCD2 Ab from that used in the rest of the experiments; as a result, the average values from different experiments may appear different for the same line. The comparisons presented in this study are made within the same experiment.
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and anti-CD3
Abs, followed by streptavidin MicroBeads (Miltenyi Biotec). The cells were stained with PE-conjugated anti-CD8
, anti-TCR
, anti-Mac1, anti-Ter119, anti-CD19, anti-DX5, and streptavidin (all Abs were from BD Biosciences), and PE-negative cells were sorted according to CD44 and CD25 expression on MoFlo sorter (DakoCytomation). RT-PCR analysis of RNA
For the HBP1.C line, total RNA from sorted DN subpopulations was prepared with TRIzol (Invitrogen Life Technologies) following the manufacturers instructions. For the HBP1.A line, we sorted 50 cells from each DN subpopulation per sample using the MoFlo (DakoCytomation) sorter. In both cases, the RNA was reverse transcribed, and the cDNA was amplified by PCR as previously described (27, 28). Human growth hormone (hGH) primer was used for both the RT reaction and the first PCR. Human GH (nested) was used for the second PCR. HBP1 primer was used in both PCRs. The primers for the hprt gene that was used as an internal control have been described previously (27, 28): HBP1, 5'-GCAAAGGCTTTGGCTGAAGA-3'; hGH, 5'-AGGTCTGCTTGAAGATCTGC-3'; and hGH (nested), 5'-AAGGCACTGCCCTCTTGAAGC-3'.
| Results |
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We have shown previously in transgenic mice that a deletion of the HBP1-binding sequences in the hCD2-LCR construct leads to PEV when the transgene is integrated in a heterochromatic region (9). We proposed that HBP1 might play a role in chromatin opening and/or remodeling activities by binding to the LCR. To investigate further the effect of HBP1 on chromatin configuration, and consequently on hCD2 LCR function, a cDNA encoding the human HBP1 protein was cloned in the plck expression vector (29) to generate HBP1 transgenic mice (Fig. 1). The plck vector contains the p56lck proximal promoter that is active almost exclusively in thymocytes (30) and has been used to express transgenes specifically in the thymus (29, 31, 32). Three transgenic mouse lines (HBP1A, HBP1B, and HBP1C) with multiple copies of the transgene (n = 4560) at pericentromeric or telomeric chromosomal sites were generated. We did not detect any rearrangement of the transgenic construct, indicating that most, if not all, integrated copies were intact. We could not detect any expression of the transgene in line HBP1B, and it was therefore discontinued. Expression of the transgene was confirmed by Northern blot analysis of total RNA (Fig. 1) and RT-PCR (not shown). The transgene gives rise to higher m.w. transcripts compared with the endogenous gene due to the additional exons present in the expression cassette that are spliced onto the HBP1 mRNA.
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Examination of the thymus in HBP1A transgenic mice indicated that the cellularity of this organ was lower than that in age-matched CBA nontransgenic mice. To study the kinetics of this phenomenon, transgenic mice were compared with sex- and age-matched nontransgenic mice at 1 day postpartum and at 1, 3, 6, and 9 wk of age. Fig. 2A shows that newborn transgenic mice had similar cellularity as nontransgenic counterparts. As early as 1 wk later, however, differences became apparent, and these were more noticeable at the ages of 3 and 6 wk. By 9 wk of age, thymus cellularity was the same in both groups, possibly because normal involution in wild-type mice had reduced the organ to a similar size. When homozygous transgenic mice were compared with heterozygous littermates, it was found that the former had an even lower cellularity, suggesting that the phenomenon was dose dependent (data not shown). Similar lower cellularity was observed in heterozygous mice of line HBP1C, but the phenomenon was less pronounced (Fig. 2B).
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We have shown previously that hCD2 transgenes with only 1.5 kb (CD2-1.5) of the minimum 2-kb LCR sequences (Fig. 4A) exhibit variegating expression (2). This deletion leaves behind a region called FT1, which is recognized by the DNA-binding protein HBP1 (9). We also have shown previously that deletion of a 30-bp sequence including the FT1 region resulted in transgenes that were susceptible to PEV, suggesting that HBP1 might be involved in the protection of the hCD2 transgene from PEV (9).
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The variegating mice did not exhibit discreet expressing and nonexpressing populations; instead, a wide range of expression levels was observed, with only a proportion expressing as high as expected from the number of copies integrated, suggesting that PEV in these mice is not an all-or-none phenomenon involving all integrated copies.
Overexpression of HBP1 increases the proportion of CD2high-expressing T cells in variegating mice
It is possible that PEV reflects incomplete silencing by neighboring heterochromatin, which may be the result, at least in part, of the competition between suppressive and activating chromatin proteins whose competitive efficiency may depend on their relative concentrations (33). In support of this hypothesis, experiments in transgenic mice indicated that overexpression of HP1
(M31) in hCD2 variegating transgenic mice results in an increase in the proportion of T cells that take the decision to silence the transgene (34). Using a similar strategy, the HBP1 factor, which binds to the FT1 region of the LCR, was tested directly for its ability to modulate the transgenic hCD2 locus expression in CD2-1.5A and CD2-1.5F transgenic mouse lines as well as in the nonvariegating CD2-1.5E mouse line. As a control, we used a variegating line (CD2-1.3B) that carried an hCD2 transgene that differs from the constructs present in lines CD2-1.5A, -E, and -F by only a 200-bp deletion containing the HBP1 binding site (2). These reporter lines were crossed to the HBP1A and HBP1C lines, and the expression pattern of the hCD2 locus in double-positive thymocytes of double-transgenic mice was compared with that of single hCD2 transgenic mice by flow cytometry (Fig. 5). Single-transgenic CD2-1.5A mice have, on the average, 12% CD2high-expressing thymocytes (Fig. 6A). In double transgenics, an increase to an average of 26.4% was observed in the proportion of CD2high-expressing thymocytes (Fig. 6A). The CD2-1.5F variegating mouse shows an average of 10% CD2high-expressing thymocytes (Fig. 6A). In double transgenics, the increase in HBP1 resulted in an increase in the proportion of CD2high-expressing thymocytes to an average of 21% (Fig. 6A). A similar effect on the extent of variegation was observed with the HBP1C line (Fig. 6B). These results show clearly that HBP1 influences PEV in CD2 variegating mice that carry a CD2-1.5 construct with a disabled LCR. The CD2-1.5E nonvariegating line was also crossed to the HBP1A line, and their analysis showed that overexpression of HBP1 had no effect on the pattern or level of CD2 expression (Fig. 5).
To assess whether the effect of HBP1 overexpression is sequence specific, the hCD2-1.3B variegating line (that does not contain the HBP1 binding site) was crossed to the HBP1A transgenic line. No increase in the proportion of CD2high-expressing thymocytes was found when HBP1 was overexpressed (71.4 vs 72.2%; see Fig. 6C for the average). To confirm that the relief of PEV in CD2-1.5 transgenic mice is dependent on HBP1 binding, we examined the extent of variegation in single-transgenic mice carrying an hCD2 construct with the full LCR minus 30 bp containing the HBP1 binding site (hCD2-
FT1) and that exhibit variegation (9). We compared these mice with double-transgenic mice (HBP1A/hCD2-
FT1) and observed no difference in the extent of variegation (Fig. 6D), supporting the idea that the relief of variegation shown in Fig. 5 depends on the presence of an intact HBP1 binding site within the LCR. These data demonstrate that HBP1 probably influences PEV of the CD2 locus via the FT1 region localized in the LCR-HSS3. All data of flow cytometric analyses are shown as scatter plots in Fig. 6.
Time variegation of the onset of expression of the lck-HBP1 transgenic constructs
We were puzzled by the observation that the effects of HBP1 overexpression (reduced thymus cellularity, CD8 SP thymocyte overproduction, and relief of hCD2 transgene PEV) were more pronounced in the HBP1-A line despite the fact that it expressed less HBP1 RNA in total thymus preparations. We hypothesized that the explanation may lie in the fact that lck transgenic constructs show variability at the onset of their expression (3, 32). We addressed the issue by sorting DN subsets based on their expression of CD25 and CD44 surface molecules. RT-PCR on RNA isolated from DN1, DN2, DN3, and DN4 populations was analyzed for the expression of transgenic HBP1. As shown in Fig. 7, in the HBP1A line, transcripts appear as early as the DN1 stage, whereas in the HBP1.C line, we did not detect any transcripts until the cells reached the DN3 stage. From this we conclude that the differences observed between the two HBP1-overexpressing lines are due to the different times of onset of HBP1 transgene expression.
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| Discussion |
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Despite the overall decrease in thymus cellularity, it was surprising to find that deregulation of HBP1 expression led to an increase in the proportion and absolute numbers of CD8 SP mature thymocytes. Increased numbers of CD8 cells have been observed in several other transgenic mice. For example, Bcl2- or TOX-overexpressing transgenic mice show an accumulation of mature CD8 thymocytes for different reasons (36, 37). It is possible that extra HBP1 molecules accelerate the rate of commitment toward the CD8 lineage at the expense of CD4 SP cell production. Interestingly, a phenotype similar to that described in this study has been seen in mice overexpressing a stabilized
-catenin transgene. These mice show enhanced thymic involution and enhanced generation of CD8 SP thymocytes (38). It is therefore possible that overexpression of HBP1, which has been shown to be involved in the Wnt-
-catenin pathway, deregulates this signaling cascade, resulting in faster involution and increased CD8 SP thymocyte production. We hope to be able to address this question in the future.
Cell-to-cell variations in heterochromatin spreading have been proposed to explain the mosaic silencing seen in PEV, with inactivation or full expression indicating whether a heterochromatic structure has encompassed a gene (39). Furthermore, it has been shown previously that variegation in yeast and in mammalian cells can be modified by activating regulatory cis-acting elements, such as promoters or enhancers (40, 41, 42, 43). The results of these studies suggest that increased transcriptional activity either helps to prevent the establishment of silencing at the locus or increases the probability that the promoter/enhancer will eventually escape silencing through mitosis (44).
The studies presented in this report indicate that the concentration of HBP1 can influence variegation of the target hCD2 locus. It has been reported that HBP1 can act as transcriptional activator (45, 46) or repressor (25, 26, 35). Although the precise mechanism by which HBP1 deregulation leads to the phenotype we describe is not known, several explanations can be envisaged. One possibility is that HBP1 relieves variegation by helping to enhance expression of the CD2 transgenic locus directly. Such a role has been suggested for other HMG box proteins, such as LEF-1/T cell factor-1, in the regulation of the adenosine deaminase enhancer-LCR (47). It is also possible that HBP1 may be able to disrupt higher order chromatin structure due to its ability to bend DNA via its HMG box domain. DNA bending is a common (but not universal) characteristic of transcription factors, and it is thought to play a role in gene regulation (47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57). However, whether HBP1 acts simply to stabilize interactions at protein-protein interfaces (thereby serving primarily an architectural role), to destabilize the nucleosome array at the integration site, or to directly enhance transcription is unknown.
An alternative explanation for the phenomenon of PEV relief by overexpression of HBP1 could be that normally HBP1 interacts and recruits the LCR-repressive activities that are present in rate-limiting levels in the nucleus and which the disabled LCR cannot counteract. In this scenario, extra molecules of HBP1 might act in a dominant-negative fashion by sequestering the repressor proteins away from the LCR.
It was unexpected that the effects seen in the HBP1.A line are stronger than those seen with line HBP1.C given that the levels of transgenic mRNA are higher in the latter. In this study we show that this may be due to the variable onset of the transgene expression. It has been shown that lck-based vectors exhibit a time variegation (3, 32), and the transgenes in different lines can start expressing at variable time points during thymocyte development within the DN stages. We believe that the differences in the magnitude of the effects reflect differences in the time of onset of expression of the lck-HBP1 transgene between lines HBP1.A (onset at DN1) and HBP1.C (onset at DN3).
The results of this study confirm that HBP1 plays an important role in the activation of CD2 transgenic loci by showing that overexpression of HBP1 is related to the proportion of cells that switch on the locus. It will be interesting to assess whether HBP1 mediates this effect at least in part by bending the DNA and/or by interacting with chromatin remodeling complexes with activation or suppression activities.
| Acknowledgments |
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| Disclosures |
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| Footnotes |
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1 This work was supported by the Medical Research Council, United Kingdom. B.S. was supported by Grant PL970203 from the European Community. E.K. was supported by Marie Curie Individual Fellowship HPMF-CT-2000-00805 from the European Community. ![]()
2 Current address: Department for Molecular Biomedical Research VIB, Ghent University, Ghent, B-9052 Belgium. ![]()
3 E.S. and E.K. contributed equally to this work. ![]()
4 Address correspondence and reprint requests to Dr. Dimitris Kioussis, National Institute for Medical Research, Division of Molecular Immunology, The Ridgeway, Mill Hill, London, U.K. NW7 1AA. E-mail address: dkiouss{at}nimr.mrc.ac.uk ![]()
5 Abbreviations used in this paper: LCR, locus control region; DN, double negative; GH, growth hormone; h, human; HMG, high mobility group; HBP1, human HMG box transcription factor 1; HSS, DNase I-hypersensitive site; PEV, position effect variegation; SP, single positive; LEF, lymphoid enhancer factor. ![]()
Received for publication September 20, 2004. Accepted for publication July 27, 2005.
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