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Division of Viral Immunology, Center for AIDS Research, Kumamoto University, Kumamoto, Japan
| Abstract |
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and two inframe
transcripts of TCR was previously reported to recognize an HIV
Pol-derived nonapeptide (IPLTEEAEL) endogenously presented by both
syngeneic HLA-B*3501 and HLA-B*5101. In the current study, a
retrovirus-mediated TCR transfer of individual
- and
-chains to
TCR-negative hybridoma showed that V
12.1 TCR in complex with V
5.6
were responsible for the peptide-specific response in the context of
both HLA-B*3501 and HLA-B*5101, confirming single TCR-mediated dual
specificity. The second TCR-
chain was not somehow expressed on the
cell surface. Remarkably, the V
12.1/V
5.6 TCR also recognized the
same peptide presented by allogeneic HLA class I molecules that share
the similar peptide-binding motifs, such as HLA-B*5301 and HLA-B*0702.
The sensitivity of peptide recognition by the V
12/V
5.6 TCR
appeared to be comparable when the peptide was presented by syngeneic
and allogeneic HLA class I molecules, with changes in T cell
responsiveness caused largely by peptide-binding capacity. Moreover,
the CTL clone bearing V
12.1/V
5.6 TCR showed substantial cytolytic
activity against the peptide-loaded cells expressing HLA-B*3501,
HLA-B*5101, HLA-B*5301, or HLA-B*0702, providing further evidence that
a single TCR complex can recognize the same peptide presented by a
broad range of HLA class I molecules. A TCR with fine specificity for
an HIV Ag but broad specificity to multiple HLA molecules may provide
an advantage to the generation of allorestricted, peptide-specific T
cells, and thus could be a potent candidate for immunotherapy against
HIV infection. | Introduction |
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TCR complexes. Indeed, a significant portion (1030%)
of human and mouse peripheral T cells express two 
TCR complexes
on their cell surface (9). In a recent study, TCR gene
transfer showed that the dual specificity of an alloreactive T cell
clone that recognizes undefined peptides presented by HLA class I and
class II molecules was mediated by a single TCR complex
(10).
It has been reported, despite their genetic diversity, that different
HLA class I molecules share peptide-binding motifs
(11, 12, 13, 14) and that some antigenic peptides that bind to
more than one HLA class I molecule are recognized by CD8 T cells in the
context of one or more HLA class I restriction elements (6, 7, 15). However, the important question of whether a single TCR
complex can recognize a single peptide presented by distinct HLA class
I restriction elements remains to be examined. We previously described
two CTL clones established from an HIV-infected individual that
recognized a naturally processed peptide derived from the HIV-1 Pol
protein (HIV Pol448456; H-IPLTEEAEL-OH)
presented by two syngeneic HLA class I molecules, HLA-B35 and HLA-B51
(7, 16). However, analysis of TCR-encoding genes revealed
that one of these clones had two different inframe TCR-
transcripts
and one TCR-
transcript (7). Thus the possibility that
the two TCR-
chains played a role in this dual specificity could not
be excluded.
In the current study, we used a retroviral gene transfer system to
transfer the TCR-
chain and the different TCR-
chains of the CTL
clones into a TCR-negative T cell hybridoma. We clearly showed that a
single TCR complex recognizes the same peptide (IPLTEEAEL) presented by
both syngeneic HLA-B35 and HLA-B51 molecules. Remarkably, this TCR
complex could also specifically respond to the same peptide presented
by allogeneic HLA class I molecules, such as HLA-B7 and HLA-B53 which
share a similar peptide-binding motif (HLA-B7-like supertypes).
Together, these findings indicate an additional level of
cross-reactivity in T cells, demonstrating that the TCR complex
interacts predominantly with the peptide Ag, with the HLA class I
molecule behaving solely as a scaffolding component for the peptide
rather than as a restriction element for the TCR.
| Materials and Methods |
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CTL clones were maintained in RPMI 1640 and 10% FCS
supplemented with 100 U/ml recombinant human IL-2 and were stimulated
weekly with irradiated T2 cells expressing the HLA-B*3501 molecule in
the presence of the Pol448456 peptide. The
TCR-negative mouse T cell hybridoma TG40 (17) was kindly
provided by Dr. T. Saito (Chiba University, Chiba, Japan) and
was transduced as described below by a retroviral vector containing a
human CD8
gene. Four days later, transduced cells that were brightly
stained by anti-CD8 mAb were selected by fluorescence-activated
cell sorting (FACSVantage; BD Biosciences, San Jose, CA). The selected
TG40 cells expressing human CD8
(TG40/CD8) were used to reconstruct
human TCR complexes as described below. A series of C1R and RMA-S
transfectants expressing different HLA class I molecules were
previously generated (18, 19).
The following Abs were used: FITC-conjugated anti-human CD8 mAb
(DAKO, Carpinteria, CA), PE-conjugated anti-mouse CD3
mAb (2C11;
BD PharMingen, San Diego, CA), PE-conjugated anti-human V
2.1 TCR
mAb (Beckman Coulter, Fullerton, CA), and FITC-conjugated
anti-human V
12.1 TCR mAb (Endogen, Woburn, MA). An anti-HLA
class I mAb, w6/32 was prepared from culture supernatants of a
w6/32-secreting hybridoma (American Type Culture Collection,
Manassas, VA).
Preparation of tetrameric peptide-MHC complex (tetramer)
A tetrameric complex of peptide (Sawady Technologies, Tokyo,
Japan),
2-microglobulin
(
2M),3
and HLA-B*3501 was prepared as described (7). Briefly, an
ectodomain of HLA-B35 (15 mg) and
2M (100 mg)
produced in Escherichia coli as inclusion bodies were first
solubilized in denaturing buffer containing 8 M urea and then refolded
in refolding buffer (100 mM Tris-HCl, pH 8.0, 400 mM arginine, 2 mM
EDTA acid, 5 mM reduced glutathione, 0.5 mM oxidized glutathione, 0.1
mM PMSF) in the presence of 5 mg of a chemically synthesized peptide
for 48 h at 4°C. The resultant 45-kDa ternary complex was
purified by size-exclusion and anion-exchange chromatographies.
Purified complexes were enzymatically biotinylated at a birA
recognition sequence located at the C terminus of the H chain, and were
mixed with PE-conjugated avidin (extravidin-PE; Sigma-Aldrich, St.
Louis, MO) at a molar ratio of 4:1 to give the HLA-tetramer
complex.
Cloning and sequencing analysis of TCR-encoding genes
Total RNA was prepared from CTL clones (
1 x
105 cells) using a total RNA isolation kit
(Qiagen, Valencia, CA). cDNA clones encoding
and
TCR were
obtained by reverse transcription using the SMART PCR cDNA synthesis
kit (Clontech Laboratories, Palo Alto, CA) with the isolated total RNA
(
50 ng) and a primer specific for C
(5'-actggatttagagtctctcagctggtaca-3') or C
(5'-ttgggtgtgggagatctctgcttctgatg-3'), respectively. cDNA was then
amplified by PCR using a high fidelity Pfu polymerase
(Promega, Madison, WI) and was cloned into a plasmid. The DNA sequence
of the
and
TCR-encoding genes was determined using an automatic
DNA sequencer (LI-COR, Lincoln, NE). To obtain full-length TCR genes
(i.e., containing not only the V and J regions, but also the C,
transmembrane, and cytoplasmic domains), we used an overlapping PCR
strategy using cDNA clones encoding
(pY1.4) and
(JUR-
-2) TCR
chains from Jurkat cells (provided by Dr. T. W. Mak, University of
Toronto, Toronto, Ontario, Canada) as templates.
Construction of retroviral vectors and gene transfer
Retrovirus-mediated gene transfer was used to reconstruct 
TCR complexes on TG40/CD8 cells essentially as described by Kitamura et
al. (20). Briefly, the genes of interest, i.e.,
full-length
and
TCR, were subcloned into the retroviral vector
pMX, which was kindly provided by Dr. T. Kitamura (Tokyo University,
Tokyo, Japan). The resulting constructs were first transfected
into the ecotropic virus packaging cell line Platinum-E (also a gift
from Dr. T. Kitamura) (21) using the transfection
reagent Lipofectamine 2000 (Invitrogen, Groningen, The Netherlands).
Two days later, culture supernatant containing recombinant virus was
collected and then incubated with TG40/CD8 cells in the presence of 10
µg/ml polybrene for 6 h. The cells were cultured for an
additional 2 days for analysis of TCR gene expression or selection of
cells using appropriate antibiotics. Transduced TG40/CD8 cells showing
bright staining by anti-mouse CD3
mAb were selected by
fluorescence-activated cell sorting and used for further functional
assays.
Peptide binding to HLA class I molecules
Peptide-binding affinity for HLA class I molecules was assessed by an HLA stabilization assay as described (7, 22). In brief, a series of RMA-S transfectants expressing HLA-B*3501, HLA-B*5101, or HLA-B*5301 was cultured for 18 h at 26°C and then pulsed with various concentrations of peptide for 3 h at 26°C. Cells were then incubated at 37°C for 3 h and subsequently stained by an anti-HLA class I mAb, TP25.99, and FITC-conjugated IgG fraction of sheep anti-mouse Ig (SILENUS Labs, Victoria, Australia). The surface expression level of the HLA class I molecule was evaluated by a mean fluorescence intensity (MFI) determined by flow cytometric analysis (FACSCalibur; BD Biosciences). The concentration of the peptide that yielded a half maximal binding level (BL50) was calculated by defining the surface expression level of HLA class I molecules on cells incubated continuously at 26°C for 24 h as maximal.
IL-2 assays for cellular activation
TCR recognition of peptide-HLA class I complexes was analyzed by
cellular activation of TCR-transduced TG40/CD8 cells, measured by IL-2
production as previously described by Zumla et al. (17)
with modifications. C1R cells or transfectants expressing HLA molecules
(104 cells/well) were preincubated in a 96-well
microtiter plate for 30 min at 37°C in the absence or presence of
various concentrations of peptide. TG40/CD8 cells (2 x
104 cells/well) expressing a defined TCR complex
were added to the culture medium containing RPMI 1640 and 10% FCS in a
total volume of 200 µl. A portion of the culture supernatant (100
µl) was removed from each well after a 48-h incubation at 37°C,
transferred to another culture plate, and frozen at -20°C. The
amount of IL-2 produced by the TG40/CD8 cells was determined by
analyzing the proliferative activity of the IL-2 indicator cell line
CTLL-2. CTLL-2 cells (2 x 104/well) were
incubated with the prepared culture supernatants for 18 h at
37°C. [3H]Thymidine (TdR; Amersham Pharmacia,
Piscataway, NJ) was added and the cells were then incubated for an
additional 6 h before being harvested onto glass fiber filters.
After thorough washing of the filters with distilled water, the amount
of [3H]TdR incorporated by CTLL-2 cells that
was retained on the filters was determined by a scintillation counter
(MicroBeta TriLux; Warrac Oy, Turku, Finland). The
EC50 value of the peptide was calculated as the
concentration of peptide that exhibited a half-maximal activation of
TCR-transduced TG40/CD8 cells with CD3
-mAb-mediated activation of
the cells defined as maximal.
Cytotoxic assay
The cytotoxic activity of the CTL clones was determined by a standard 51Cr-release assay as previously described (7). When peptide-pulsed C1R cells were used as target cells, C1R cells or transfectants expressing HLA class I molecules were first incubated with 100 µCi Na251CrO4 (Amersham Pharmacia) in saline for 1 h at 37°C, and then washed three times with a culture medium. The 51Cr-labeled C1R cells (2 x 103 cells/well) were plated in a 96-well round-bottom microtiter plate in the absence or presence of the various concentrations of peptide. After 1 h, CTL clones (2 x 103 cells/well) were added and the plate was incubated for an additional 4 h at 37°C. To determine maximum and spontaneous 51Cr release, 5% Triton X-100 or culture medium alone, respectively, was also added to different wells. A portion of the culture supernatant (100 µl) was then removed from each well and analyzed by a gamma counter. The percent specific lysis was calculated as previously described (7).
| Results |
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Two CTL clones, designated 562 and 589, originally
established from an HIV-infected patient (HLA-A24/A26, B35/B51, Cw3/-)
following stimulation of peripheral lymphocytes with an HIV Pol-derived
synthetic epitope peptide (HIV Pol448456;
H-IPLTEEAEL-OH) were previously found to exhibit dual specificity
recognizing the same Pol448456 peptide
presented by both HLA-B*3501 (B35) and HLA-B*5101 (B51) (7, 16). These CTL clones showed specific cytotoxic activity against
several kinds of target cells expressing B35 or B51, such as C1R, T1,
and .221 cells either pulsed with Pol448456
peptide or infected with viruses expressing HIV Gag-Pol polyproteins
(7). Following cloning and sequencing analysis of
TCR-encoding genes, we previously reported that CTL clone 589 had two
inframe TCR-
transcripts (V
10.1 and V
12.1) and one TCR-
transcript (V
2.1). However, the CTL clone was not stained by
anti-V
2.1 mAb (7).
In the current study, we first asked whether one or two TCR complexes
are responsible for the dual recognition exhibited by CTL clone 589.
The TCR-negative mouse T cell hybridoma cell line, TG40
(17), was transduced with human CD8
to give TG40/CD8
cells, which were then transduced with TCR genes. Cells transduced with
V
12.1 and V
2.1 TCR (TG40/CD8/TCR
12
2.1) were clearly stained
by anti-CD3
, anti-V
12, and V
2.1 mAbs (data not shown),
indicating that the human-derived TCR was successfully reconstructed on
the surface of the TG40/CD8 cells. This result is in accordance with a
previous report demonstrating that 
TCR was expressed on the
surface of TG40 cells upon transduction with TCR-encoding genes
isolated from Jurkat T cells (17). However, the
observation that the cells were stained by anti-V
2.1 mAb
appeared inconsistent with our previous finding that the parent CTL
clone 589 was not stained by the same mAb (7). To clarify
this issue, we reisolated TCR-encoding genes from CTL clone 589. This
time, no TCR-
transcripts from the V
2.1 family were isolated, and
instead a different TCR-
transcript classified in the V
5.6 family
was isolated (Table I
). CTL clone 562,
isolated from the same patient as clone 589 (7), were also
found to have the same TCR-
gene from the V
5.6 family, suggesting
that the correct TCR-
chain recognizing the
Pol448456 peptide presented by B35 is from the
V
5.6 family and not the V
2.1 family (see also Figs. 1
and 2
). Therefore, we used
the newly isolated V
5.6 gene for the
remainder of this study. We again isolated two inframe
transcripts
of V
10.1 and V
12.1 families in both CTL clones (Table I
), as
reported previously (7).
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12.1/V
5.6 on the
cell surface
To address the issue of whether one or two TCR complexes is
responsible for the dual recognition exhibited by CTL clone 589,
TG40/CD8 cells were transduced with a retroviral vector expressing the
V
5.6 TCR and puromycin-resistance genes. Puromycin-resistant cells
were isolated and then transduced with retroviral vectors expressing
either the V
10.1 or V
12.1 TCR coupled bicistronically with green
fluorescent protein (GFP). Transduced cells were stained by
anti-CD3
mAb and then analyzed by flow cytometry. As shown in
Fig. 1
A, TG40/CD8/V
5.6 cells transduced with V
12.1 TCR
were stained by anti-CD3
mAb, indicating that 
TCR bearing
V
12.1/V
5.6 formed a complete TCR/CD3 complex on the transduced
cells. In contrast, TG40/CD8/V
5.6 cells transduced with V
10.1 TCR
were not stained by CD3
mAb (Fig. 1
A). Because these
cells showed bicistronic expression of GFP, mRNA encoding V
10.1 TCR
should have been transcribed in GFP-positive cells. Moreover, TCR-
protein was observed in an immunoprecipitate using an anti-C
-mAb
F1 (Endogen) following detergent solubilization of GFP-positive
cells (data not shown). This suggests that the V
10.1 gene was
transcribed and translated into protein in the transduced cells, but
the TCR V
10.1 protein was somehow unable to form a heterodimer
complex with the V
5.6 TCR protein and therefore was not present on
the cell surface. It has been reported that particular combinations of
murine 
TCR are deficient in paring to form mature heterodimer
complexes at the posttranslational stage (23), which may
explain our observation. Taken together, these data suggest that only
one TCR complex bearing V
12.1/V
5.6 is functionally expressed on
the surface of the parental CTL clones and, therefore, that this single
V
12.1/V
5.6 TCR complex is responsible for the dual specificity of
the CTL clone for Pol448456 peptide presented
by both B35 and B51.
A single TCR complex bearing V
12.1/V
5.6 can mediate both
HLA-B35 and HLA-B51-restricted peptide recognition
To directly confirm that the V
12.1/V
5.6 TCR complex has dual
specificity, TG40/CD8 cells were transduced with a bicistronic
retroviral vector containing V
12.1 and V
5.6 or V
2.1 genes, and
then cells showing bright staining with anti-CD3
mAb were sorted
by flow cytometry.
We first tested the ability of the transduced TG40/CD8 cells to bind to
the PE-labeled B35 tetramer (Fig. 1
B). Cells expressing
V
12.1/V
5.6 or V
12.1/V
2.1 TCR were similarly stained with
anti-CD3
mAb (Fig. 1
B), indicating that they
expressed a comparable level of TCR/CD3 complex on their surface. In
contrast, cells expressing the V
12.1/V
5.6 TCR were stained by the
B35 tetramer, whereas the cells expressing the V
12.1/V
2.1 TCR
were not stained (Fig. 1
B). This indicates that only the
V
12.1/V
5.6 TCR can specifically interact with the
Pol448456 peptide/B35 complex. We could not
investigate the dual specificity of the V
12.1/V
5.6 TCR for
Pol448456 peptide/B51 complexes using tetramers
as, despite many attempts to prepare a B51 tetramer in complex with the
Pol448456 peptide, we have not yet succeeded in
refolding the Pol448456 peptide/B51 complex
under cell-free conditions. Considering that the
Pol448456 peptide has previously been shown to
be endogenously present on B51 molecules (7), distinct
mechanisms might play a role in the exogenous and endogenous
peptide-assembling pathway of B51 molecules (24).
We next tested the ability of the TCR-expressing TG40/CD8 cells to
recognize the Pol448456 peptide presented by
B35 and B51 as assessed by a cellular activation assay (Fig. 2
A). Both TG40/CD8/TCR
12
2.1 and
TG40/CD8/TCR
12
5.6 cells were comparably activated by
anti-CD3
mAb (Fig. 2
A), confirming a functional
TCR/CD3-mediated signaling system in these cells. The transduced
TG40/CD8 cells were then incubated in the presence or absence of 1 µM
Pol448456 peptide either with C1R cells or with
a series of transfectants expressing HLA-A*0201 (A2), B35, and B51.
TG40/CD8/TCR
12
5.6 cells exhibited substantial activation when
cocultured with C1R-B3501 and C1R-B5101 in the presence of the peptide,
but not when cocultured with C1R-A0201 in the presence of the peptide
or with any of the cells in the absence of the peptide (Fig. 2
A). In contrast, neither TG40/CD8 nor
TG40/CD8/TCR
12
2.1 cells appeared to be activated in response to
any of the C1R cells tested, even in the presence of 1 µM
Pol448456 peptide (Fig. 2
A). These
data clearly indicate that a single TCR complex bearing
V
12.1/V
5.6 has dual specificity recognizing
Pol448456 peptide presented by both B35 and
B51. However, it should be noted that TG40/CD8/TCR
12
5.6 cells did
show a small response to peptide-pulsed C1R and C1R-A0201 cells,
although these responses were significantly lower compared with their
response to peptide-pulsed C1R-B3501 and C1R-B5101 cells (Fig. 2
A). This response could be due to the low level of
endogenous HLA-B*3503 expressed on C1R cells (25)(see also
Fig. 4
B), which could bind
Pol448456 peptide and present it to the T
cells.
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12
5.6 cells have a different
sensitivity to Pol448456 peptide presented by
B35 or B51, TG40/CD8/TCR
12
5.6 cells were stimulated by the C1R
transfectants in the presence of various concentrations of
Pol448456 peptide. As shown in Fig. 2
12
5.6 cells to both
C1R-B3501 and C1R-B5101 cells was proportional to peptide
concentration, with EC50 values of 2.6 and 140 nM
for B35 and B51, respectively.
The V
12.1/V
5.6 TCR recognizes the same peptide presented by
multiple HLA class I molecules
A group of HLA class I alleles has been shown to share
peptide-binding motifs and have the ability to bind a series of
identical peptides (14). Among them, HLA-B7-like
supertypes are defined as HLA-B alleles with a preference for peptides
with proline at position 2 (P2) and hydrophobic/aromatic residues at
the C terminus (11, 13). These alleles include HLA-B*0702
(B7), B35, B51, HLA-B*5301 (B53), and HLA-B*7801 (B78). Although there
are many polymorphic amino acid residues among different HLA class I
alleles (Fig. 3
), it may be possible that the
Pol448456 peptide, which has Pro at P2 and a
hydrophobic residue at the C terminus, binds to all these HLA
molecules, and is recognized by the same TCR. To test this possibility,
TG40/CD8/TCR
12
5.6 cells were incubated separately with C1R cells
expressing different HLA class I molecules in the presence or absence
of various concentrations of Pol448456 peptide,
and then their activation was analyzed (Fig. 4
A). The HLA expression levels
were all shown to be comparable among the C1R transfectants, as
assessed by staining with w6/32 mAb (Fig. 4
B), which has a
broad range of specificity to various HLA class I alleles and
recognizes a conformational epitope of the HLA class I complex
including
2M and the polymorphic H chain
(26). Remarkably, as shown in Fig. 4
A,
TG40/CD8/TCR
12
5.6 cells showed substantial IL-2 release in
response to the Pol448456 peptide presented by
B7 and B53 (EC50 values of 690 and 270 nM,
respectively), and moderate release in response to peptide presented by
HLA-B*5201 (B52) (EC50 of 1.4 µM). In contrast,
the cells showed only a low level of IL-2 release when the peptide was
presented by A2 and B78 (EC50 > 10 µM). Given
that the V
12.1/V
5.6 TCR was isolated from peripheral T cells of
an individual who carries B35 and B51 alleles but not B7 or B53, it is
of significant interest that this TCR showed peptide-specific
recognition restricted by allogeneic B7 and B53.
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We next examined whether the apparent decreased sensitivity of
TG40/CD8/TCR
12
5.6 cells to Pol448456
peptide presented by allogeneic HLA molecules is caused by decreased
binding affinity of these molecules to the peptide. Using mutant
peptides with different C-terminal anchor residues and hence with
different binding activities to HLA class I molecules, we compared T
cell responsiveness (EC50 value as determined by
a cellular activation assay) and peptide-binding activity
(BL50 value as determined by a HLA stabilization
assay using RMA-S cells), and sought to analyze changes in
TCR-peptide-HLA interactions
(EC50/BL50 ratio) when the
peptide was presented by self (B35) and nonself (B53) HLA class I
molecules.
As revealed by HLA stabilization assays using an RMA-S
transfectant expressing B35,
Pol448456 peptide bound to self B35 molecules,
with a BL50 value of 1.2 µM (Fig. 5
A, Table II
). Substitution of
Leu to Ile at the C terminus (Pol448456-9I)
resulted in a
35-fold reduced binding activity to B35, whereas
substitution of Leu to Phe (Pol448456-9F)
showed a comparable binding activity to B35 (Fig. 5
A, Table II
). In cellular activation assays, TG40/CD8/TCR
12
5.6 cells
responded comparably to Pol448456 and
Pol448456-9F peptides, but showed
38-fold
reduced sensitivity to the Pol448456-9I peptide
(Fig. 5
B). Consequently, virtually the same
EC50/BL50 values were
obtained for the peptides tested (Table II
), indicating that the
V
12/V
5.6 TCR can tolerate changes of amino acid side chains at
the C terminus of peptides presented by B35.
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2 region and have five amino acid
differences in the
1 region (Fig. 3
50-fold decrease in binding activity
compared with that for B35. Both Pol448456-9I
and Pol448456-9F peptides showed 1.9- and
3.2-fold increased binding activity to B53, respectively (Fig. 5
12
5.6 cells responded with 2.4- and 3.4-fold
increased sensitivity to the Pol448456-9I and
Pol448456-9F peptides presented by B53,
respectively, compared with Pol448456 peptide
(Fig. 5
12/V
5.6 TCR can tolerate changes in amino acid side chains at
the C terminus of peptides presented by B53.
The EC50/BL50 values
obtained when the same peptide (either
Pol448456,
Pol448456-9I, or
Pol448456-9F) was presented by B35 or B53 were
also all comparable (<2-fold differences; Table II
). This indicates
that the apparent decreased sensitivity of TG40/CD8/TCR
12
5.6
cells to Pol448456 peptide presented by
allogeneic HLA molecules is largely caused by the decreased binding
activity of these molecules for the peptide and that the V
12/V
5.6
TCR binds to the peptide-HLA complex with a comparable affinity whether
the peptide is presented by B35 or B53.
It should be noted that, although TG40/CD8/TCR
12
5.6 cells
recognized the Pol448456 peptide presented by
B51 but not by B78 (Fig. 4
A), in the course of HLA
stabilization assays we observed poor binding of
Pol448456 peptide to both B51 and B78
(BL50 >1 mM). Because the ability of
Pol448456 peptide to be endogenously presented
by B51 has previously been shown in a peptide-elution study using
C1R-B5101 cells infected with recombinant vaccinia virus expressing the
HIV Pol protein (7), the reason for not being able to
detect binding of Pol448456 peptide to B51 in
the HLA stabilization assay is unclear. However, it has previously been
documented that peptide binding to B51 is generally low
(29) and that endogenous assembling of B51 for Ag
presentation is slow (24) compared with B35. This could
explain why Pol448456 peptide binding to
HLA-B51 could not be detected in our HLA stabilization assay.
A parental CTL clone killed peptide-pulsed target cells in the context of multiple HLA molecules
To further confirm that the V
12.1/V
5.6 TCR has multiple
specificity and can recognize a single peptide presented by a broad
range of B7-like HLA supertype molecules, we tested the ability of
parental CTL clone 589 to kill peptide-loaded target cells expressing
different HLA molecules. Although the CTL clone has two inframe TCR-
transcripts, our data showed that only one (V
12.1) is functionally
expressed on their cell surfaces and is thus the determinant for Ag
specificity in the CTL clone. In support of this, staining of the clone
with anti-V
12.1 mAb as well as
Pol448456/B35 tetramer showed virtually no
negative subsets in the cell populations (data not shown).
As shown in Fig. 6
, the CTL clone showed
specific lysis activity against peptide-loaded C1R cells expressing
B35, B51, B53, or B7. The CTL clone was most sensitive to target cells
expressing B35 (Fig. 6
), consistent with the finding that
recognition of Pol448456 peptide by
TG40/CD8/
12
5.6 cells was 50-fold more potent when the peptide was
presented by B35 compared with when it was presented by B51 (Fig. 2
B).
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| Discussion |
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12.1/V
5.6 TCR was reconstructed on the surface of TG40/CD8 cells
(a TCR-negative mouse T cell hybridoma cell line expressing human
CD8
) and Ag recognition by the TCR was assessed by analyzing IL-2
release by the TCR-expressing TG40/CD8 cells. In the second system, the
parental CTL clone was confirmed to exclusively express
V
12.1/V
5.6 TCR on its surface and Ag recognition by the TCR was
assessed by determining the cytolytic activity of the CTL clone. In
addition, modulation of peptide-binding affinity to different HLA class
I molecules by introduction of mutant C-terminal anchor residues in the
Pol448456 peptide revealed that peptide
recognition by V
12.1/V
5.6 TCR was comparable when the peptide was
presented by different HLA class I molecules. A TCR with fine
specificity for an HIV Ag but broad specificity to multiple HLA
molecules may provide an advantage to the generation of allorestricted,
peptide-specific T cells, and thus could be a potent candidate for
immunotherapy against HIV infection based on TCR gene transfer
technology (30, 31, 32).
As many as 30% of human T cells have been reported to coexpress two
different TCR-
chains on their cell surface (9). These
T cells may be involved in some forms of unconventional recognition,
such as alloreactivity and autoimmunity (9).
Alternatively, dual receptor T cells may provide a benefit to the
immune system by extending the immune repertoire for foreign Ags
(33). Dual specificity of these T cells may be via the two
different 
TCR complexes each recognizing a different peptide-HLA
complex. Indeed, in our previous study (7), a
dual-specific CTL clone recognizing Pol448456
peptide presented by B35 and B51 was found to have one
and two
inframe
TCR transcripts. However, using retroviral gene transfer of
the two 
TCR complexes into TCR-negative TG40/CD8 cells, we
showed that the dual specificity was not mediated through the two
different 
TCR complexes. Instead, a single 
TCR complex
bearing V
12.1/V
5.6 exhibited multiple specificities, recognizing
Pol448456 peptide presented by multiple HLA
class I molecules.
It is of note that the parental CTL clone showed a >10-fold higher
sensitivity to Pol448456 peptide presented by
B35 compared with TG40/CD8 cells transduced with the V
12.1/V
5.6
TCR. The latter recognized Pol448456 peptide at
concentrations down to 1 nM, but the parent CTL clone exhibited
significant cytotoxic activity even at a peptide concentration of 0.1
nM. It is conceivable that certain costimulatory molecules present on
the surface of the CTL clone, but not on the mouse-derived TG40/CD8
cells, may enhance ligand recognition by the CTL clone, or that CTL
clones have some intrinsic property that allowed them to achieve
low-density ligand recognition. In fact, T cells have been shown to
increase their affinity/avidity for an epitope following Ag stimulation
through changes in their membrane organization and a redistribution of
signaling molecules (reviewed in Ref. 34). We thus propose
that the system used in this study involving reconstruction of the TCR
complex on the surface of TG40/CD8 has a marked advantage in
investigation of ligand recognition by TCRs because the effect(s) of
costimulatory molecules or membrane architectures can be excluded.
Five of the HLA class I alleles analyzed in this study, B35, B51, B52,
B53, and B78, are members of a serologically cross-reacting group,
whereas the sixth, B7, is a member of a different serological group.
However, all except B52 preferentially bind peptides with (Pro at P2)
in their binding peptides, with B52 preferentially binding peptides
with Gln at P2 (14). There are only two amino acid
differences between B51 and B52 alleles: Asn63
and Phe67 of B51 are replaced by
Glu63 and Ser67 in B52
(19). Because structural analysis of the B51 molecule has
shown that the Phe67 residue forms a part of the
B pocket (35), the Phe to Ser substitution in B52 most
likely accounts for its different peptide-binding preference. It is
thus likely that the observed 10-fold reduced recognition by
V
12.1/V
5.6 TCR-bearing T cells of
Pol448456 peptide presented by B52 compared
with peptide presented by B51 is due to reduced binding of
Pol448456 peptide to the B52 molecule.
Allelic difference in HLA-B*3501 and HLA-B*5301stems five amino acid residues found in the
1 region associated
with HLA-Bw4/Bw6 epitopes. Structural studies of B35 and B53 have shown
that three of the five polymorphic residues form the part of F pocket
and thereby attribute in part to the preference of these HLA molecules
for particular C-terminal anchor residues in binding peptides
(27, 28). By precise comparison of the data for T cell
responsiveness and peptide-binding capacities, we show in this study
that the V
12.1/V
5.6 TCR interacted comparably with the
Pol448456 peptide presented by both self B35
and nonself B53. The tolerance of the V
12.1/V
5.6 TCR for
polymorphic differences between different HLA class I molecules could
be due to this TCR making relatively strong contacts with other regions
of the antigenic surface of the peptide-HLA complex, such as charged
interactions through the three Glu residues located at P5, P6, and P8
of the Pol448456 peptide. It is also likely
that this TCR recognizes the peptide and shared structural features of
several HLA-B molecules, as reflected in their common propensity to
bind the same peptide, because crystal structures of several
peptide/MHC class I complexes have consistently shown that 7080% of
the peptide surface is buried in the binding cleft of MHC, leaving only
2030% of the peptide surface exposed for interaction with solvent or
TCR (36).
A very high level of cross-reactivity is an intrinsic and necessary
characteristic of ligand recognition of the TCR (37). For
example, the murine 2C TCR recognizes the octapeptide LSPFPFDL with
syngeneic Kb and also with allogeneic
Ld (38, 39), and this TCR also
recognizes another octapeptide EQYKFYSV with Kb
and allogeneic Kbm3 (1, 40).
Cross-reactivity of TCR has often been explained by the molecular
mimicry model, proposing that different peptide/MHC complexes may form
antigenic surfaces which are similar in shape, charge, or both
(41, 42). In contrast, Zhao et al. (43) have
reported in their structural study that rather than simple molecular
mimicry, unpredictable arrays of common and differential contacts on
the different peptide/MHC complexes are used for their recognition by
the xeno-reactive murine TCR AHIII12.2. In addition, a recent detailed
mutational study focusing on 15 TCR contact sites on the HLA-A2
molecule recognized by an A6 TCR specific for the Tax peptide presented
by HLA-A2 has shown that only three amino acids
(Arg65, Lys66, and
Ala69) located on the
1 helix affect T cell
recognition (44). However, in contrast, a study of mouse
2C TCR binding to the QL9 peptide presented by class I MHC
H2-Ld estimated that 37% of the binding energy
results from recognition of peptide, with 63% resulting from
recognition of the MHC (45). Considering that different
types of interactions might be expected within different
TCR/peptide/MHC complexes, mutational analysis and crystallographic
structural analysis of the V
12.1/V
5.6 TCR and the
Pol448456 peptide in complex with self and
nonself HLA class I molecules could provide further insights into the
molecular details of how a single TCR recognizes different HLA class I
molecules while retaining its peptide specificity.
It should also be noted that, in repeated experiments,
TG40/CD8/TCR
12
5.6 cells recognized the
Pol448456 peptide presented by B7 but not by
B78. The failure to detect binding of Pol448456
peptide to B78 as assessed by an HLA stabilization assay appeared to
directly correlate with a lack of responsiveness by
TG40/CD8/TCR
12
5.6 cells to peptide-loaded C1R cells expressing
B78. Consistent with these observations, the preferred binding peptide
motif of B78 (Pro, Ala, or Gly at P2 and hydrophobic amino acid
residues at P6) (46), does not fully match the
Pol448456 peptide sequence (which has Glu at
P6), whereas the preferred binding peptide motif of B7 (Pro at P2 and
Leu or Phe at P9) (14) does match the
Pol448456 peptide sequence. In addition, B78
and B51 have identical
2 helices and B78 and B35 differ by only one
amino acid in the
1 helix at residue 74 (Asp and Tyr in B78 and B35,
respectively), whereas B7 and B35 differ by 20 amino acids including
the difference at residue 74 (Asp in B7 as well). It may be possible
that the Tyr74 residue found in B35, B51, B52,
and B53 plays an important role in binding to
Pol448456 peptide and that the change to
Asp74 is responsible for the loss of this binding
in B78. However, because B7 also has an Asp74
residue, the other amino acid changes might contribute to compensating
for the decreased peptide binding, TCR binding, or both. It is obvious
that staining the CTL clones or the TCR-expressing TG40/CD8 cells using
an HLA tetramer with B7, B51, or B53 could provide additional arguments
on the ligand recognition of this cross-reactive TCR. However, we have
not yet succeeded in refolding the Pol448456
peptide with these HLA molecules despite many attempts, probably
because the HLA complex with a low-binding peptide is relatively
unstable during the course of the refolding step.
In summary, by focusing on various HLA class I alleles that share
similar peptide-binding motifs, we demonstrated that a single 
TCR complex (V
12.1/V
5.6) has the ability to specifically
recognize a foreign peptide presented by multiple self (B35 and B51)
and nonself (B53 and B7) HLA class I molecules. Considering that this
TCR was isolated from an HIV-infected patient (HLA-A24/26, B35/51,
Cw3/-), T cells bearing this TCR should have been positively selected
in the patients thymus at least in the context of B35, B51, or both.
However, the overall contribution of up to six different HLA class I
alleles in the selection of one CD8 T cell is so far not clear. A
recent report showed that self MHC shapes the repertoire of not only
self-restricted, but also alloreactive, T cells, because the closer the
foreign MHC molecule is related to the T cells MHC, the higher the
proportion of peptide-specific, alloreactive T cells vs T cells
recognizing the foreign MHC molecule (47). Therefore, it
is possible that, when an individual has two different HLA-B alleles
with similar peptide-binding motifs (B35 and B51 in this study) after
positive and negative thymic selection in the context of these HLA
class I alleles, a portion of CD8 T cells would to some extent
cross-react with nonself HLA-B alleles that have a similar
peptide-binding motif (B53 and B7 in this study). It is also of
significant interest that, through large genetic correlation studies
using AIDS cohorts, Carrington and colleagues (48, 49)
reported an association between certain subtypes of HLA-B35
and HLA-B53 and rapid progression to AIDS and an association
between HLA-B51 and slow progression to AIDS. Therefore, not
only subtle differences in peptide-binding activity, but also the
specific or cross-reactive nature of Ag-specific CTLs restricted by
these HLA-B alleles will be helpful for understanding CD8 T
cell-mediated immune defense in individuals with HIV infection.
| Acknowledgments |
|---|
| Footnotes |
|---|
2 Address correspondence and reprint requests to Dr. Masafumi Takiguchi, Division of Viral Immunology, Center for AIDS Research, Kumamoto University, 2-2-1 Honjo, Kumamoto 860-0811, Japan. E-mail address: masafumi{at}kaiju.medic.kumamoto-u.ac.jp ![]()
3 Abbreviations used in this paper:
2M,
2-microglobulin; MFI, mean fluorescence intensity; TdR, thymidine; GFP, green fluorescent protein; P, position; BL50, half maximal binding level. ![]()
Received for publication May 17, 2002. Accepted for publication August 27, 2002.
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