The JI Acurri Cytometers
HOME HELP FEEDBACK SUBSCRIPTIONS ARCHIVE SEARCH TABLE OF CONTENTS
 QUICK SEARCH:   [advanced]


     
 


This Article
Right arrow Abstract Freely available
Right arrow Full Text (PDF)
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Right arrow Citation Map
Services
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Download to citation manager
Citing Articles
Right arrow Citing Articles via HighWire
Right arrow Citing Articles via Google Scholar
Google Scholar
Right arrow Articles by Jankovic, V.
Right arrow Articles by Nikolich-Zugich, J.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Jankovic, V.
Right arrow Articles by Nikolich-Zugich, J.
The Journal of Immunology, 2002, 169: 1887-1892.
Copyright © 2002 by The American Association of Immunologists

T Cell Recognition of an Engineered MHC Class I Molecule: Implications for Peptide-Independent Alloreactivity1

Vladimir Jankovic2,*,{dagger}, Kristin Remus2, Alberto Molano2,3,{dagger},{ddagger} and Janko Nikolich-Zugich4,*,{dagger},{ddagger}

* Vaccine and Gene Therapy Institute and Oregon National Primate Research Center, Oregon Health and Science University, Beaverton, OR 97006; {dagger} Laboratory of T Cell Development, Immunology Program, Memorial Sloan-Kettering Cancer Center, and {ddagger} Weill Graduate School of Medical Sciences, Cornell University, New York, NY 10021


    Abstract
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
Previously, we described H-2KbW9 (KbW9), an engineered variant of the murine MHC class I molecule H-2Kb (Kb), devoid of the central anchor ("C") pocket owing to a point mutation on the floor of the peptide binding site; this substitution drastically altered selection of bound peptides, such that the peptide repertoires of Kb and KbW9 are largely nonoverlapping in vivo. On the basis of these observations, we used KbW9 and Kb to revisit the role of peptides in alloreactive T cell recognition. We first compared Ab and TCR recognition of KbW9 and Kb. Six of six Kb-specific mAbs, directed against different parts of the molecule, recognized KbW9 well, albeit at different levels than Kb. Furthermore, KbW9 readily served as a restriction element for a peptide-specific syngeneic CTL response. Therefore, KbW9 mutation did not result in gross distortions of the TCR-interacting surface of class I, which was comparable between Kb and KbW9. Interestingly, when KbW9 was used to stimulate allogeneic T cells, it induced an infrequent CTL population that cross-reacted against Kb and was specific for peptide-independent MHC epitopes. By contrast, Kb-induced alloreactive CTLs recognized Kb in a peptide-specific manner, did not cross-react on KbW9, and were present at much higher frequencies than those induced by KbW9. Thus, induction of rare peptide-independent CTLs depended on unique structural features of KbW9, likely due to the elevated floor of the peptide-binding groove and the consequent protruding position of the peptide. These results shed new light on the relationship between TCR and peptide-MHC complex in peptide-independent allorecognition.


    Introduction
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
The CD8+ CTL recognize foreign Ags in the form of peptides bound to self MHC-encoded class I molecules (reviewed in Ref. 1). As a by-product of this type of recognition, the majority of CTLs reactive with non-self MHC class I molecule also recognize peptides bound to non-self MHC class I molecules (reviewed in Refs. 1 and 2). The structural features responsible for TCR binding to and activation by the peptide-MHC (pMHC)5 complex are still being elucidated, but it is clear that both the MHC class I H chain and the peptide contribute to recognition (3, 4). Crystallography has shown that most of the peptide surface area is deeply buried in the MHC I binding groove, inaccessible to solvent. Thus, the issue of how a TCR discriminates between various pMHC complexes is drawing considerable interest. One important question is whether binding of different peptides can induce biologically relevant variation in pMHC conformation. Although crystal structure of a number of human and murine MHC class I molecules revealed close superimposability of the {alpha} carbon backbones of these molecules, ruling out major structural variation, measurable movement of side chains and, occasionally, of the main chain segments, was detected as an indirect result of peptide interactions by x-ray crystallographic (5, 6, 7, 8), serological (9, 10, 11, 12, 13, 14), and biophysical (15) studies.

Previously, we engineered and characterized an H-2Kb variant, KbW9, devoid of the central anchor ("C") pocket owing to a point mutation located on the floor of the peptide-binding groove (V9-> W). This mutation drastically altered selection of bound peptides so that the KbW9 molecule predominantly, if not exclusively, bound nonamers, and new peptide anchor residues substituted for the loss of the P5F/Y:C pocket interaction. Molecular modeling strongly suggested that KbW9 bound nonamers bulge out of the groove and are more exposed to TCR than Kb-bound peptides (16). Results also indicated that the peptide repertoires of Kb and KbW9 were largely nonoverlapping in vivo (16). Therefore, these two class I molecules were suitable for investigation of the effect of different peptide motifs on MHC structure and TCR binding.

In this study, we compared conformation-sensitive Ab and alloreactive TCR-mediated recognition of Kb and KbW9. We found that the unique features of KbW9 floor which result in unique length and positioning of the peptide resulted in selection of peptide-independent, cross-reactive CTLs. Based on these results, structural correlates of cross-reactive, peptide-independent MHC allorecognition are discussed.


    Materials and Methods
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
Mice

B10.A(4R) mice (H-24r, Kk, Ak, Db) were obtained from The Jackson Laboratory (Bar Harbor, ME) and were used at 8–16 wk of age. B10.A (4R).Kb and B10.A (4R).KbW9 (abbreviated as 4R.Kb and 4R.KbW9) transgenic mice were generated as described below.

mAbs and FCM analysis

Anti-H-2Kb mAbs Y3 (19), 5F1 (20), EH-144 (19), 28.13.3 (22), 100.30 (9), and AF6-88.5.3 (AF6, ATCC HB158; American Type Culture Collection, Manassas, VA) were used in the form of ascitic fluid. Secondary PE-conjugated goat anti-mouse IgG2a and IgG2b were obtained from Fisher Scientific (Malvern, PA). Cell lines and flow cytofluorometry (FCM) were described previously (17).

Generation of transgenic mice

To generate transgenic mice, 11-kb SalI fragments of the wild-type Kb and the mutant pKbW9 TCR neo construct (16) containing the wild-type or mutated gene under the transcriptional control of endogenous elements were isolated on a 0.6% low melt agarose gel and purified using Gelase agarase according to the manufacturer’s (Epicentre Technologies, Madison, WI) instructions. After phenol-chloroform extractions, the fragments were resuspended in Tris-EDTA buffer containing CsC at 1.68 g/ml and centrifuged at 90,000 rpm for 4 h. Peaks containing the DNA were collected and dialyzed 3–4 times in 4 L of injection buffer (5 mM Tris, 5 mM NaCl, 0.1 mM EDTA, pH 7.4). Purified constructs were injected by the Memorial Sloan-Kettering Cancer Center Transgenic Animal Core Facility into (CBA/Ca x B6)F2 fertilized eggs. Transgenic mice were screened by a combination of FCM and PCR methods, and the transgene was backcrossed for at least 10 generations onto the B10.A(4R) background. Expression of the B10.A(4R) endogenous and transgenic MHC molecules was confirmed by a combination of Southern blot and FCM techniques.

Peptides

Peptides were obtained from the Memorial Sloan-Kettering Cancer Center Microchemistry Core Facility or from Research Genetics (Huntsville, AL). Origins, sequences, and original references for the peptides OVA-8, HSV-8, FLK-8 (18), and VEP-9 (VEPVRLILL) VPY-9 (sequenceVAPYVRLLIL; Ref. 16). are given in respective references and in the abbreviations footnote.

Generation of alloreactive CTL and CTL assays

B10.A(4R) splenocytes (20 x 106) were mixed with 20 x 106 irradiated (3000 rad) splenocytes from either 4R.Kb or 4R.Kbw9 mice in upright 25-cm3 tissue culture flasks (Falcon; BD Biosciences, San Jose, CA) containing 10 ml of RPMI 1640-10% FCS. Seven days later, effector CTLs were counted, and 3 x 106 cells were restimulated with irradiated (3000 rad) 20 x 106 (B10.A(4R)-transgenic) splenocytes and 20 x 106 B10.A(4R) feeder cells in flasks containing 10 ml of RPMI 1640-10% FCS medium. Subsequently, CTL were maintained by weekly restimulation as described above, in the presence of cytokine-rich Con A supernatant. Effectors were harvested on day 5 after restimulation for use in 51Cr release assays. 51Cr release assays were performed as previously described (18). For detection of peptide-independent epitopes, TAP-deficient, class I-transfected cells were grown overnight at 28°C before 51Cr labeling or, alternatively, grown overnight at 29°C, collected, incubated for 30 min at 29°C with relevant peptides (5 µg/ml), and then labeled with 51Cr and processed at 37°C.


    Results
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
Surface expression and Ab recognition of KbW9

For the purpose of analyzing the immune response restricted by KbW9, we generated KbW9 (and control Kb) transgenic mice and bred the transgene onto an Kb-negative background using B10.A(4R) mice (Kk Ak E0 Db), abbreviated as 4R. Strains thereby obtained are referred to as 4R.Kb and 4R.KbW9. To assess conformational integrity of the {alpha}1 and {alpha}2 domains of Kb and KbW9, we stained Kb and KbW9 with a panel of Kb-specific Abs. TgKb and TgKbW9 were expressed at comparable levels (both were expressed off the endogenous regulatory elements), differing by <15% as assessed by the anti-Kb mAb Y3 staining (Fig. 1Go). The Y3 (19) epitope is on the right side of the {alpha}2 helix, adjacent to the C terminus of the peptide. This Ab recognizes only properly folded and peptide-occupied molecules and is not sensitive to the character of bound peptide or to peptide-induced Kb movements and is thus generally believed to provide an excellent measure of the overall expression of Kb-like molecules (9).



View larger version (16K):
[in this window]
[in a new window]
 
FIGURE 1. Y3 mAb binding to wt H-2Kb and H-2KbW9 mutant molecule. 4R.Kb transgenic (_) and 4R.KbW9 transgenic splenocytes ( ... .) incubated with no primary Ab (A) and with Y3 (B) and specific binding were visualized by staining with an IgG2a-PE secondary Ab. Results are representative of six experiments.

 
We then examined the conformation of the mutant molecule using a panel of five Kb-specific mAbs (5F1, EH144, Y25, 28.13.3, and 100.30). These Abs recognize distinct epitopes on the {alpha}1 and {alpha}2 helices. All are more or less sensitive to the changes in the bound peptide and the consequent indirect rearrangements of the class I side chains and were extensively used to assess the conformation and subtle rearrangements of the pMHC complex. A lack of binding of one or more of these Abs is considered evidence for significant alterations of the parts of the pMHC complex, whereas decreases or increases in binding are indicative of subtle rearrangements in the solvent-accessible portion of the pMHC complexes (19, 20, 21, 22, 23). The 5F1 epitope maps to the left end of the {alpha}2 helix (19, 20, 21); the EH-144 (19, 20) epitope lies on the right end of the {alpha}1 helix, in the vicinity of residues 77, 80, 89 and 90; 28.13.3 binds to the "left" part of the TCR contact area, possibly contacting both helices, whereas 100.30 has not been precisely mapped but has been shown to be sensitive to alterations in the N half of the peptide (9).

The binding efficiency of peptide-sensitive Abs can be evaluated by calculating the staining intensities corrected for surface expression of Kb and KbW9 detected by Y3, the Y3 index (Fig. 2Go). Such analysis indicated that the presence of nonamers bulging out of the groove affects the binding of Abs, likely by rearranging the MHC side chains. This makes the epitopes of AF6, EH144, 5F1, and 28.13.3 less optimal, and the epitope of 100.3 more optimal for mAb binding. Therefore, KbW9 exhibits subtle differences in serological profile compared with wild-type molecule, while retaining all the common Ab epitopes tested. The fact that none of the mAbs exhibited a loss of recognition suggested that KbW9 folds just like Kb and that no massive alterations were introduced into the {alpha}-helical parts of KbW9 by virtue of the mutation at the floor of the molecule. Variation of the Y3 index for other Abs was consistent with the subtle rearrangement of different KbW9 regions. Therefore, comparable TgKb and TgKbW9 levels and absence of gross conformational disturbances caused by the introduced mutation allowed us to study and compare the peptide-presenting function of KbW9.



View larger version (21K):
[in this window]
[in a new window]
 
FIGURE 2. Binding efficiency of peptide-sensitive Abs to wild-type H-2Kb and H-2KbW9 mutant molecule. {blacksquare} and , Binding of indicated Kb-specific Abs to Kb and KbW9 transgenic splenocytes, respectively. Results are shown as percentage of mean fluorescence intensity obtained after Y3 staining (Y3 index). Results are representative of three independent experiments.

 
KbW9 can function as a restricting element in an antipeptide CTL response

To assess the ability of KbW9 to serve as a restricting element for an Ag-specific CTL response, we immunized 4R.KbW9 mice with a synthetic peptide VPY-9 (VAPYRLLIL). This peptide contains the preferred KbW9-binding sequence, deduced from the bulk elution and sequencing of the KbW9-binding self peptides (16), but it also contains a noncanonical (and, presumably, non-self) Y at the position P4, previously defined as a non-MHC contact for KbW9-binding nonamers. The rationale for this experiment was that P4 would be a potential TCR contact and that it should therefore elicit an Ag-specific response. Indeed, a robust CTL response was obtained in response to VPY-9 priming (Fig. 3Go). This response was specific and KbW9 restricted, because neither peptide-negative control KbW9 cells nor VPY-9-pulsed Kb cells were lysed. These results indicate that KbW9 can serve as a restricting element for an Ag-specific CTL response. They also imply that this molecule is expressed on professional APCs and on the thymic epithelium and that it can mediate both positive intrathymic selection and Ag uptake and presentation in vivo.



View larger version (15K):
[in this window]
[in a new window]
 
FIGURE 3. H2-KbW9-restricted CTL response to in vivo priming by peptide immunization. 4R.KbW9 transgenic mice were immunized with a synthetic KbW9-binding peptide (VAPYRLILL) in adjuvant. Seven days later, spleen cells were harvested and restimulated in vitro for 5 days (18 ). CTL responses of individual mice were then tested in a 51Cr release assay as described elsewhere (18 ). Target cells were either P815-Kb ({diamond} and {diamondsuit}) or P815-KbW9 cells ({blacktriangleup} and {triangleup}), incubated in the absence ({lozenge} and {triangleup}) or the presence of a control (FLK, an influenza virus nucleoprotein-derived peptide that binds to Kk ({diamondsuit}) or of the immunizing (VAPYRLILL ({blacktriangleup})) peptide (1 µg/ml). The results represent reactivity of >15 mice from at least 5 independent experiments.

 
Alloreactive T cell subsets responding to Kb and KbW9 differ in specificity of TCR recognition

To study the TCR-mediated allorecognition of Kb and KbW9, we generated CTL lines against both the mutated and the wild-type molecules. We used splenocytes from B10.A(4R) mice as responders and splenocytes from B10.A(4R)-KbW9 or B10.A(4R)-Kb transgenics as stimulators in a standard MLR (see Materials and Methods).

We next compared the TCR specificities of the alloresponding T cell populations by testing whether 4R CTL lines generated against KbW9 and Kb cross-reacted with Kb or KbW9, respectively (Fig. 4Go). Interestingly, although 4R anti-Kb cells did not recognize KbW9, alloreactive 4R anti-KbW9 CTL lines invariably (100% cultures) strongly cross-reacted with Kb. It is noteworthy that three in vitro restimulations were required to expand these anti-KbW9-specific CTLs as the cytolytic reactivity of MLR cultures at earlier stages was low and unremarkable. This indicates that the frequency of KbW9-specific CTL precursors is low. A similar alloreactivity pattern and similarly low CTL precursor frequency were observed when BALB/c CTLs were generated against Kb and KbW9 transfectants in vitro (not shown). These experiments revealed distinct T cell populations responding to the two class I molecules: the alloreactive anti-Kb subset with monospecific TCRs and the less frequent anti-KbW9 alloreactive cells that are cross-reactive and respond to both wild-type and engineered MHC.



View larger version (12K):
[in this window]
[in a new window]
 
FIGURE 4. Alloreactive 4R CTL response against wild-type H-2Kb (A) and H-2KbW9 (B) MHC molecules. Alloreactive CTL lines were established, and CTL assays were conducted as described in Materials and Methods. Wild-type P815 ({lozenge}) or P815-Kb ({blacksquare}) or P815-KbW9 ({blacktriangleup}) were used as target cells. P, Peptide. Results are representative of 20 independent experiments.

 
Cross-reactive anti-KbW9 CTLs recognize MHC ligand in a peptide-independent manner

Two possible reasons could account for the observed cross-reactivity. The shared determinants recognized by anti-KbW9 CTLs could be found exclusively on the MHC molecules themselves. Alternatively, a subset of peptides binding to both molecules in a similar conformation could be recognized by the anti-KbW9 CTLs. This would be consistent with our previous finding that a subset of synthetic peptides that bind well to KbW9 can also bind (albeit 100-fold worse) to Kb (16). To test the first hypothesis, we explored the peptide dependency of MHC recognition by the cross-reactive anti-KbW9 TCRs (Fig. 5Go). To that effect, we used TAP-deficient cell lines expressing wild-type Kb (RMA-S) or KbW9 (RS-W9) as targets in a standard Cr release cytotoxicity assay. These cells express empty class I molecules that are unstable at 37°C and can be stabilized by overnight shifting to 29°C. Moreover, when incubated with defined class I-binding peptides, empty class I molecules capture those peptides and present them to T cells (23). The cross-reactive anti-KbW9 CTLs lysed both RMA-S and RS-W9 cells expressing empty Kb and KbW9 (stabilized by overnight culture at 29°C). Furthermore, the cytotoxicity also occurred on both types of targets for which the class I molecules were loaded with different exogenous peptides, Kb or KbW9 binding peptides. As expected, the killing of targets cultured at 37°C was lower, corresponding to low levels of MHC expressed on their surface. Cross-reactive CTLs also lysed S.bm8 (not shown), a cell line expressing Kbm8, a natural Kb mutant containing a groove mutation that alters the conformation of a subset of bound peptides (17, 24). Overall, the cytotoxic response of KbW9-induced cross-reactive T cells depended only on class I ligand density and not the presence or identity of bound peptides. Thus, the data show that anti-KbW9 CTLs cross-react with Kb due to the peptide-independent recognition of MHC determinants.



View larger version (17K):
[in this window]
[in a new window]
 
FIGURE 5. Peptide (P) dependency of anti-KbW9 (A and B) and anti-Kb (C) CTL alloresponse. Alloreactive CTL lines were established, and CTL assays were conducted as described in Materials and Methods. As indicated, different target cells were used in a 51Cr release assay: wild-type P815 cells were used as a negative control, whereas Kb and KbW9-transfected P815 cells (P-Kb and P-W9) were positive controls for alloreactive cytotoxic response. To determine peptide dependency of alloreactive CTL populations, Kb and KbW9-transfected TAP-deficient targets were processed as described in Materials and Methods. Results are representative of three independent experiments.

 
Wild-type Kb does not elicit alloreactive peptide-independent CTLs

If different MHC topology, formed because of the groove mutation present in KbW9, is responsible for activating alloreactive peptide-independent CTLs, we reasoned that under identical conditions Kb should not activate the same CTL population. We repeated the above peptide dependency experiment using anti-Kb cells as effectors. Alloreactive anti-Kb CTLs thus generated were peptide dependent (Fig. 5Go); they failed to lyse RMA-S cells carrying empty MHC molecules or Kb molecules loaded with defined exogenous peptides. Thus, the ability to activate alloreactive peptide-independent CTLs was a specific property of the mutant KbW9 molecule.

Evidence that peptide-independent cross-reactive recognition of Kb and KbW9 molecules is mediated by the same TCRs

As mentioned, the cross-reactive, peptide-independent CTLs are infrequent given that they require three in vitro restimulations for expansion and reliable detection of its lytic activity. One, therefore, might wonder about the relationship between the cross-reactivity observed among KbW9 raised CTLs and peptide independency. The design of our experiment is unequivocal in that regard; cross-reactive CTL, raised against KbW9, are the ones for which we show lack of peptide dependency in Fig. 5Go. Because such cells grow by stimulation on KbW9 and can functionally recognize both Kb and KbW9, one could at most envision that there are two potential populations present within such lines, one cross-reactive to both Kb and KbW9 and another monospecific for KbW9. The results shown in Fig. 5Go undoubtedly argue that the cross-reactive cells are peptide independent; they are the only ones capable of recognizing both types of targets in the first place (monospecific cells cannot recognize Kb by definition). The potential presence of a KbW9-monospecific population is irrelevant to that conclusion. Moreover, although we cannot at this point categorically exclude the presence of occasional monospecific cells among the cross-reactive lines, our results strongly suggest that they would be a minor population based on two lines of evidence. First, of the more than 30 experiments in which independent lines against KbW9 were elicited, we had only 1 case in which cross-reactivity was weaker than recognition of the original ligand; and in no experiment did we see any evidence of cross-reactivity when the original stimulus was Kb. Second, we used the line analyzed in Fig. 5Go and performed split stimulation; we passed this line on both Kb and KbW9 stimulators and assayed its target specificity. This change in stimulating ligands did not impact the recognition pattern regardless of the stimulators; lysis of both Kb and KbW9-expressing targets was within ±5% of the original reactivity of the line before split stimulation (not shown). By contrast, monospecific CTLs were indeed monospecific; CTL monospecific for Kb failed to grow when stimulated by KbW9. Therefore, we conclude that in cross-reactive lines analyzed above, both allogeneic ligands are recognized by the same TCR in a peptide-independent manner.


    Discussion
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
Here, we dissected the impact of the introduced groove mutation in the H-2Kb molecule on both Ab and alloreactive TCR-mediated recognition of the class I molecule. Our data indicate that conformational variations in class I molecule can influence interactions with the TCR and determine the peptide dependency of alloresponding CTL populations raised against the wild-type and the mutated MHC molecule.

It could be argued that instead of direct recognition of allogeneic molecules, our results reflect indirect presentation of a Kb and/or KbW9 peptide(s) by other molecules (e.g., Kd in a cytotoxic assay). This is unlikely to be the case for three reasons. First, in the experiments, we used P815-Kb and P815-KbW9 as targets in a CTL assay, where presentation of a Kb and/or KbW9 peptide by Kd is theoretically possible, the responding CTLs never saw that combination in the course of CTL priming. They were raised against the Kb or KbW9 molecules on Kk/Db background. It is highly unlikely that a peptide from Kb and/or KbW9 bound to Kk/Db would look similar to the CTLs as the same (or even different) peptide bound to Kd/Dd/Ld. Second, even if this was so, we show that alloreactivity is peptide independent in the case of KbW9, and it is difficult to see how would that be compatible with recognition of a MHC-derived peptide on another MHC. Finally, results in Fig. 5Go show that the same CTL recognize Kb and/or KbW9 molecules in the absence of any other molecules on target cells (RMA-S cell transfectants), formally ruling out indirect recognition.

The qualitatively conserved but quantitatively distinct patterns of Ab binding to Kb and KbW9 suggest subtle rearrangements in the pMHC structure in the mutant molecule. In previous serological studies describing peptide-dependent class I epitopes (9, 10, 11, 12, 13, 14), the change in Ab binding was explained by the difference in amino acid composition of bound peptides that induced subtle rearrangement of MHC side chains. Crystallographic data demonstrated that bound peptides can alter MHC conformation. In the HLA-A2 structure, the solvent-accessible side chain 167 adopts different conformations when different peptides are bound (7). Similarly, in different H-2Kb-peptide complexes, solvent-accessible side chains 66, 146, 152, 155, and 167 adopt different conformations (5, 8), and MHC-bound peptides may limit the rotamers of other solvent-accessible side chains on the rim of the peptide-binding groove (13). Furthermore, it has been argued that the MHC main chain conformation is affected by bound peptide at HLA-A2 residues 144–151, H-2Kb residues 142–151, and HLA-B53 residues 141–155, all localized in the {alpha}2 domain short {alpha} helix (5, 6, 7). In our case, KbW9 binds nonamers, rather than octamers (which bind to Kb). Increased peptide length (9 instead of 8 aa customary for Kb) and the elevated position of the middle of the KbW9 groove floor are both likely to cause the bound peptide to be more exposed than in complexes of octamers with Kb. This, in turn, has the potential to cause subtle rearrangements in the adjacent {alpha}-helical residues or even in main chain positions of KbW9.

Using the biophysical technique of fluorescence resonance energy transfer (FRET), Catipovic et al. (15) found no FRET between different anti-Kb mAb when empty H-2Kb molecules were analyzed, but a detectable FRET if peptides were added, and the magnitude of FRET depended on the sequence of the peptide used. Their results imply that empty H-2Kb molecules are in a relatively extended conformation and that this conformation becomes more compact when peptide is bound. One characteristic of Kb structure with bound octameric peptides is that peptides are heavily buried by the Kb helices that come close together over parts of peptide. Given that the helices of KbW9 are likely to be pushed apart by the bulging nonamers, these complexes might mimic the loose structure of empty class I molecules. Reportedly, mAb 100.30, sensitive to certain H-2Kb conformers (9, 10), shows higher reactivity not only toward Kb occupied with certain peptides, but also toward empty Kb (10), whereas 5F1 does not effectively bind to empty Kb molecules (22). Interestingly, we detected a 2-fold increase in mAb 100.30 reactivity against the KbW9 molecule, an observation similar to that made by Soldheim et al. (11) in the case of Ld9v and the 34-1–2 mAb. Furthermore, reactivity of 5F1 mAb against the KbW9 was decreased, which is consistent with empty class I conformation. The generation of MHC conformers in KbW9 which mimic empty Kb molecules could be due to indirect effects of an altered peptide spectrum, reduced association with {beta}2-microglobulin (similar to the studies by Ribaudo et al. (25) in the case of an Ld mutant, or the combined effects of both. Studies are in progress to discriminate between these alternatives.

Our data on TCR recognition of Kb and KbW9 have revealed a population of alloreactive CTLs directed against KbW9 that cross-react with wild-type Kb. These CTLs were cross-reactive because they recognized MHC determinants, while largely disregarding bound peptides. This is in sharp contrast with the usual specificity of alloreactive CTLs (26, 27, 28) including the Kb-induced alloreactive CTLs in this study. Previous reports agree that most alloreactive CTLs are peptide dependent (26, 27, 28), although a few behave as though they can recognize class I molecules devoid of peptide (29). Potter and colleagues (29) found low precursor frequency of peptide-independent alloreactive cells. This is in full accord with our observation that three rounds of in vitro restimulation were necessary to expand a detectable number of anti-KbW9 CTLs. Although cross-reactive, these CTLs are detectable in vitro only after in vivo priming by KbW9 and not by Kb molecule. We explain this asymmetrical CTL reactivity as follows. Most CD8 cells in common mouse strains are selected on class I molecules that carry deeply buried peptides. Therefore, most of them will have a propensity to react to allogeneic molecules that carry similarly buried peptides. Thus, when stimulated by Kb, many CD8 cells selected by, e.g., Kk, will react, giving rise to a brisk and peptide-specific CTL response. By contrast, many fewer CTLs educated on pMHC molecules with buried peptides will be able to interact with pMHC molecules the peptide of which prominently arches out of the groove. In fact, only those that are able to avoid the peptide and still make meaningful contacts with the MHC helices will be selected by this form of alloantigen. It is the low frequency of these CTLs that dictates the slow nature of this response and that likely accounts for our inability to detect such CTLs when conventional pMHC molecules are used for stimulation. These observations imply that at least in this subset of alloreactive CTLs, TCR-mediated recognition depends on specific steric flexibility of TCR loops that need to descend on critical MHC residues. One could also envision that similar rules would guide allogeneic recognition between Kb and KbW9-expressing animals, i.e., that only a small subset of TCRs selected by Kb would be able to recognize KbW9. Similarly, TCRs educated on KbW9 would have difficulty recognizing Kb because they would contact only the {alpha}-helical parts of Kb in the absence of the raised central portion of the peptide. Moreover, self-tolerance would further reduce recognition of these distinct but still highly related molecules. Indeed, this was found to be the case in that we were not successful in eliciting CTL responses in either direction by in vitro stimulation. Analysis of such CTL awaits experiments with repeated in vivo stimulation by skin grafting.

The recently solved crystal structure of an allo-TCR coupled to its MHC ligand revealed that alloreactive TCRs interact with allo-MHCs in a mode similar to one used in self-MHC recognition (30), with a contact surface spanning diagonally across the peptide-binding groove. In light of this emerging universal principle for TCR interaction with both allo- and self-MHC molecules, it would be interesting to investigate the MHC contacts of TCRs that recognize self-MHC complexes in a peptide-independent manner. The question of physiological importance is whether self-MHC-restricted peptide-independent CTLs can escape negative selection and be found on the periphery, and if so, could they have any relevance for immunopathogenesis?


    Acknowledgments
 
We thank Dr. Ilhem Messaoudi for critical perusing of the manuscript and Dragana Nikolich-Zugich for expert flow cytofluorometric analysis.


    Footnotes
 
1 This work was supported in part by the DeWitt Wallace Fund and the Pew Biomedical Scholars Program and by the U.S. Public Health Service Award NIH AI 41046 (all to J.N.-Z.). Back

2 V.J., K.R., and A.M. contributed equally to this work and are therefore designated joint first authors. Back

3 Current address: Department of Microbiology and Immunology, Albert Einstein College of Medicine, Yeshiva University, Bronx, NY 10461. Back

4 Address correspondence and reprint requests to Dr. Janko Nikolich-Zugich, Vaccine and Gene Therapy Institute, 505 185th Avenue, Beaverton, OR 97006. E-mail address: nikolich{at}ohsu.edu Back

5 Abbreviations used in this paper: pMHC, peptide-MHC; FCM, flow cytofluorometry; FLK-8, dominant Kk-restricted influenza nucleoprotein peptide 52–60; HSV-8, HSV glycoprotein B peptide 495–502 (SSIEFARL); OVA-8, OVA peptide 257–264; VPY-9, synthetic peptide VAPYRLILL-9, based on the pool sequence of natural peptides eluted from KbW9; FRET, fluorescence resonance energy transfer. Back

Received for publication December 26, 2001. Accepted for publication June 4, 2002.


    References
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 

  1. Germain, R. N., D. H. Margulies. 1993. The biochemistry and cell biology of antigen processing and presentation. Annu. Rev. Immunol. 11:403.[Medline]
  2. Sherman, L. A., S. Chattopadhyay. 1993. The molecular basis of allorecognition. Annu. Rev. Immunol. 11:385.[Medline]
  3. Garcia, K. C., M. Degano, R. L. Stanfield, A. Brunmark, M. R. Jackson, P. A. Peterson, L. Teyton, I. A. Wilson. 1996. An {alpha}{beta} T cell receptor structure at 2.5 A and its orientation in the TCR-MHC complex. Science 274:176.[Free Full Text]
  4. Garboczi, D. N., P. Ghosh, U. Utz, Q. R. Fan, W. E. Biddison, D. C. Wiley. 1996. Structure of the complex between human T-cell receptor, viral peptide and HLA-A2. Nature 384:134.[Medline]
  5. Fremont, D. H., M. Matsumura, E. A. Stura, P. A. Peterson, I. A. Wilson. 1992. Crystal structures of two viral peptides in complex with murine MHC class I H-2Kb. Science 257:919.[Abstract/Free Full Text]
  6. Smith, K. J., S. W. Reid, K. Harlos, A. J. McMichael, D. I. Stuart, J. I. Bell, E. Y. Jones. 1996. Bound water structure and polymorphic amino acids act together to allow the binding of different peptides to MHC class I HLA-B53. Immunity 4:215.[Medline]
  7. Madden, D. R., D. N. Garboczi, D. C. Wiley. 1993. The antigenic identity of peptide-MHC complexes: a comparison of the conformations of five viral peptides presented by HLA-A2. Cell 75:693.[Medline]
  8. Fremont, D. H., E. A. Stura, M. Matsumura, P. A. Peterson, I. A. Wilson. 1995. Crystal structure of an H-2Kb-ovalbumin peptide complex reveals the interplay of primary and secondary anchor positions in the major histocompatibility complex binding groove. Proc. Natl. Acad. Sci. USA 92:2479.[Abstract/Free Full Text]
  9. Hogquist, K. A., III A. G. Grandea, M. J. Bevan. 1993. Peptide variants reveal how antibodies recognize major histocompatibility complex class I. Eur. J. Immunol. 23:3028.[Medline]
  10. Bluestone, J. A., S. Jameson, S. Miller, II R. Dick. 1992. Peptide-induced conformational changes in class I heavy chains alter major histocompatibility complex recognition. J. Exp. Med. 176:1757.[Abstract/Free Full Text]
  11. Soldheim, J. C., B. M. Carreno, N. B. Myers, D. R. Lee, T. H. Hansen. 1995. Peptide-induced rescue of serological epitopes on class I molecules. J. Immunol. 154:1188.[Abstract]
  12. Rohren, E. M., D. J. McCormick, L. R. Pease. 1994. Peptide-induced conformational changes in class I molecules (direct detection by flow cytometry). J. Immunol. 152:5337.[Abstract]
  13. Smith, K. D., B. E. Mace, A. Valenzuela, J. L. Vigna, J. A. McCutcheon, J. A. Barbosa, E. Huczuko, V. H. Engelhard, C. T. Lutz. 1996. Probing HLA-B7 conformational shifts induced by peptide-binding groove mutations and bound peptide with anti-HLA monoclonal antibodies. J. Immunol. 157:2470.[Abstract]
  14. Sherman, L. A., S. Chattopadhyay, J. A. Biggs, R. F. Dick, J. A. Bluestone. 1993. Alloantibodies can discriminate class I major histocompatibility complex molecules associated with various endogenous peptides. Proc. Natl. Acad. Sci. USA 90:6949.[Abstract/Free Full Text]
  15. Catipovic, B., G. Talluri, J. Oh, T. Wei, X. Su, T. E. Johansen, M. Edidin, J. P. Schneck. 1994. Analysis of the structure of empty and peptide-loaded major histocompatibility complex molecules at the cell surface. J. Exp. Med. 180:1753.[Abstract/Free Full Text]
  16. Molano, A., H. Erdjument-Bromage, D. H. Fremont, I. Messaoudi, P. Tempst, J. Nikolic-ugic. 1998. Peptide selection by an MHC H-2Kb class I molecule devoid of the central anchor ("C") pocket. J Immunol. 160:2815.[Abstract/Free Full Text]
  17. Messaoudi, I., J. LeMaoult, J. Nikolic-ugic. 1999. The mode of ligand recognition by two peptide:MHC class I-specific monoclonal antibodies. J. Immunol. 163:3286.[Abstract/Free Full Text]
  18. Dyall, R., L. V. Vasovic, A. Molano, J. Nikolic-ugic. 1995. CD4-independent in vivo priming of murine CTL by optimal MHC class I-restricted peptides derived from intracellular pathogens. Int. Immunol. 7:1205.[Abstract/Free Full Text]
  19. Ajitkumar, P., S. S. Geier, K. V. Kesari, F. Borriello, M. Nakagawa, J. A. Bluestone, M. A. Saper, D. C. Wiley, S. G. Nathenson. 1988. Evidence that multiple residues on both the {alpha}-helices of the class I molecule are simultaneously recognized by the T cell receptor. Cell 54:47.[Medline]
  20. Hua, C., C. Langlet, M. Buferne, A. M. Schmitt-Verhulst. 1985. Selective destruction by formaldehyde fixation of an h-2Kb serological determinant involving lysine 89 without loss of T-cell reactivity. Immunogenetics 21:227.[Medline]
  21. Hammreling, G. J., E. Rusch, N. Tada, S. Kimura, U. Hammerling. 1982. Localization of allodeterminants on H-2Kb antigens determined with monoclonal antibodies and H-2 mutant mice. Proc. Natl. Acad. Sci. USA 79:4737.[Abstract/Free Full Text]
  22. Jackson, M. R., E. S. Song, Y. Yang, P. A. Peterson. 1992. Empty and peptide-containing conformers of class I major histocompatibility complex molecules expressed in Drosophila melanogaster cells. Proc. Natl. Acad. Sci. USA 89:12117.[Abstract/Free Full Text]
  23. Jameson, S. C., M. J. Bevan. 1992. Dissection of major histocompatibility complex (MHC) and T cell receptor contact residues in a Kb-restricted ovalbumin peptide and an assessment of the predictive power of MHC-binding motifs. Eur. J. Immunol. 22:2663.[Medline]
  24. Dyall, R., D. H. Fremont, S. C. Jameson, J. Nikolic-ugic. 1996. T cell receptor (TCR) recognition of MHC class I variants: intermolecular second-site reversion provides evidence for peptide/MHC conformational variation. J. Exp. Med. 184:253.[Abstract/Free Full Text]
  25. Ribaudo, R. K., D. H. Margulies. 1995. Polymorphism at position nine of the MHC class I heavy chain affects the stability of association with {beta}2-microglobulin and presentation of a viral peptide. J. Immunol. 155:3481.[Abstract]
  26. Rotzschke, O., K. Falk, S. Faath, H. G. Rammensee. 1991. On the nature of peptides involved in T cell alloreactivity. J. Exp. Med. 174:1059.[Abstract/Free Full Text]
  27. Smith, K. D., E. Huczko, V. H. Engelhard, Y. Y. Li, C. T. Lutz. 1997. Alloreactive cytotoxic T lymphocytes focus on specific major histocompatibility complex-bound peptides. Transplantation 64:351.[Medline]
  28. Mendiratta, S. K., J. P. Kovalik, S. Hong, N. Singh, W. D. Martin, L. Van Kaer. 1999. Peptide dependency of alloreactive CD4+ T cell responses. Int. Immunol. 11:351.[Abstract/Free Full Text]
  29. Smith, P. A., A. Brunmark, M. R. Jackson, T. A. Potter. 1997. Peptide-independent recognition by alloreactive cytotoxic T lymphocytes (CTL). J. Exp. Med. 185:1023.[Abstract/Free Full Text]
  30. Reiser, J. B., C. Darnault, A. Guimezanes, C. Gregoire, T. Mosser, A. M. Schmitt-Verhulst, J. C. Fontecilla-Camps, B. Malissen, D. Housset, G. Mazza. 2000. Crystal structure of a T cell receptor bound to an allogeneic MHC molecule. Nat. Immunol. 1:291.[Medline]



This article has been cited by other articles:


Home page
J. Immunol.Home page
N. J. Felix, A. Suri, J. J. Walters, S. Horvath, M. L. Gross, and P. M. Allen
I-Ep-Bound Self-Peptides: Identification, Characterization, and Role in Alloreactivity
J. Immunol., January 15, 2006; 176(2): 1062 - 1071.
[Abstract] [Full Text] [PDF]


Home page
J. Immunol.Home page
A. M. E. Whitelegg, L. E. M. Oosten, S. Jordan, M. Kester, A. G. S. van Halteren, J. A. Madrigal, E. Goulmy, and L. D. Barber
Investigation of Peptide Involvement in T Cell Allorecognition Using Recombinant HLA Class I Multimers
J. Immunol., August 1, 2005; 175(3): 1706 - 1714.
[Abstract] [Full Text] [PDF]


Home page
J. Immunol.Home page
M. A. Brehm, T. G. Markees, K. A. Daniels, D. L. Greiner, A. A. Rossini, and R. M. Welsh
Direct Visualization of Cross-Reactive Effector and Memory Allo-Specific CD8 T Cells Generated in Response to Viral Infections
J. Immunol., April 15, 2003; 170(8): 4077 - 4086.
[Abstract] [Full Text] [PDF]


This Article
Right arrow Abstract Freely available
Right arrow Full Text (PDF)
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Right arrow Citation Map
Services
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Download to citation manager
Citing Articles
Right arrow Citing Articles via HighWire
Right arrow Citing Articles via Google Scholar
Google Scholar
Right arrow Articles by Jankovic, V.
Right arrow Articles by Nikolich-Zugich, J.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Jankovic, V.
Right arrow Articles by Nikolich-Zugich, J.


HOME HELP FEEDBACK SUBSCRIPTIONS ARCHIVE SEARCH TABLE OF CONTENTS