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The Journal of Immunology, 2002, 169: 359-365.
Copyright © 2002 by The American Association of Immunologists

The Murine Cytomegalovirus Immunomodulatory Gene m152 Prevents Recognition of Infected Cells by M45-Specific CTL But Does Not Alter the Immunodominance of the M45-Specific CD8 T Cell Response In Vivo1

Marielle C. Gold*, Michael W. Munks*, Markus Wagner{dagger}, Ulrich H. Koszinowski{dagger}, Ann B. Hill2,* and Steven P. Fling{ddagger}

* Department of Molecular Microbiology and Immunology, Oregon Health and Science University, Portland, OR 97201; {dagger} Max von Pettenkofer Institute, Munich, Germany; and {ddagger} Corixa Corporation, Seattle, Washington 98104


    Abstract
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
Although in vitro studies have shown that herpesviruses, including murine CMV (MCMV), encode genes that interfere with the MHC class I pathway, their effects on the CTL response in vivo is unclear. We identified a Db-restricted CTL epitope from MCMV M45 by screening an MCMV genomic library using CTL clones isolated from mice infected with MCMV lacking m152. Because m152 severely inhibits CTL recognition of M45 in vitro, we questioned whether an M45-specific response would be generated in mice infected with wild-type MCMV expressing m152. Mice infected with wild-type MCMV or MCMV{Delta}m152 made similar responses to the M45 Ag. Moreover, we saw no skewing of the proportion of M45-specific CD8 T cells within the total MCMV-specific response after infection with MCMV with m152. Despite the profound effect m152 has on presentation of M45 in vitro, it does not affect the immunodominance of M45 in the CTL response in vivo.


    Introduction
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
Herpesviruses are characterized by their ability to establish lifelong infections of their natural hosts. All herpesviruses carefully studied so far interfere with the MHC class I Ag processing and presentation pathway (1, 2). Such interference would be expected to influence the nature of the CD8 T cell response to the virus, but this has not yet been studied. Murine CMV (MCMV)3 is a natural herpesvirus infection of mice and thus provides a good model to study the effects of immune evasion on the host immune response. This paper investigates the effect of an immune evasion gene that profoundly inhibits presentation of a viral epitope on the immunodominance of that epitope. MCMV encodes three genes, m4, m6, and m152, which interfere with Ag presentation to CD8 T cells. The m4/gp34 protein binds to MHC class I molecules in the endoplasmic reticulum (ER) and on the cell surface (3, 4, 5). The m6/gp48 protein redirects class I to the lysosome for degradation (6). Finally, m152 retains class I in the ER cis-Golgi intermediate compartment (7, 8). Of these three genes, m152 appears to have the most profound effect on CTL recognition: deleting m152 makes MCMV highly visible to CTL in 51Cr release assays under conditions in which the wild-type virus is not detected (3, 9, 10).

Most CD8 T cell responses to virus infections focus on very few epitopes, even though a much larger pool of peptides is processed and presented; this phenomenon is known as immunodominance (reviewed in Ref. 11). What causes some epitopes to become immunodominant over others is poorly understood, and studies are limited for large complex viruses such as herpesviruses. We would predict that the immune response to a herpesvirus would be constrained to detect the Ags least affected by its immunomodulatory genes. In contrast, the immune response to a virus lacking immunomodulatory genes should be free to focus on more abundantly presented epitopes. As a result, we and others (11) have predicted that immunomodulatory genes would affect the immunodominance hierarchy of the CTL response.

We would expect that the Ags least affected by the immunomodulatory genes would be those that are expressed in the infected cell before expression of the immunomodulatory genes. These could be structural virion proteins introduced into the cytosol at the time of viral entry. Alternately, more abundant material should be provided by the first viral gene products synthesized. As with other herpesviruses, MCMV gene expression occurs as a regulated cascade; genes are classified as immediate early (IE), early (E), and late (L). The immunomodulatory genes m4, m6, and m152 are all E genes. An epitope from the IE1 gene product pp89 is recognized by a substantial number of CD8 T cells in BALB/c mice (12, 13, 14). Because pp89 is expressed before m4, m6, and m152, it is presumably less affected than E Ags are by these immunomodulatory genes. The pp89 Ag is presented if gene expression is limited to IE genes, but once E genes are expressed pp89 presentation is abolished due to the action of immune evasion genes (15). However, the addition of IFN-{gamma} enables pp89-specific CTL to recognize infected cells even after E gene expression (16); in contrast, the E-specific CTL clones that we have isolated from C57BL/6 (B6) mice are not able to recognize wild-type MCMV-infected targets even with the addition of IFN-{gamma} (3, 4, 5). The fact that inhibition of pp89 presentation is readily overcome may indicate that a significant amount of Ag presentation has already occurred before the immune evasion genes are expressed.

For many years, pp89 was the only MCMV CTL Ag identified, and in consequence it has been widely studied. However, most CTL in both BALB/c and B6 mice actually recognize E and not IE Ags (15, 17, 18, 19). Thus, paradoxically, the Ags that would seem most likely to be affected by immunomodulatory genes actually elicit the majority of the immunodominant responses. This led us to question what effect the viral immune evasion genes, specifically m152, which has the most profound effect, have on the immunodominance of E Ags. Until recently, no immunodominant E Ags for MCMV had been described. Three CTL epitopes from E genes (m4, M83, and M84) for BALB/c mice were identified by Holtappels and colleagues (20, 21, 22), but these are recognized by only a small number of CD8 T cells. Very recently, Holtappels et al. (23) identified a Dd-restricted epitope in m164, which is as immunodominant as pp89. There is at present no information on the effect of immunomodulatory genes on the immunodominance of these epitopes.

In the current paper we describe the use of CTL clones and a genomic expression library to identify a Db-restricted epitope encoded by the MCMV E gene M45. These clones were isolated from mice infected with a mutant MCMV lacking m152 and recognize viruses lacking m152 but are unable to detect wild-type virus in 51Cr release assays. We compared the M45-specific CTL response in mice infected with MCMV with and without m152. Surprisingly, the percentage of CD8 T cells recognizing M45 was similar in mice infected with wild-type virus or with viruses lacking m152. These data indicate that while m152 affects M45 Ag presentation in vitro it does not affect the immunodominance of M45 in vivo.


    Materials and Methods
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
Construction of the MCMV DNA expression libraries

Two MCMV expression libraries representing the MCMV genome were constructed using MCMV DNA that was originally cloned as HindIII fragments into pUC-based plasmids (known as plasmids A–P) (24). Library I was constructed using equimolar amounts of HindIII fragments A, G–K, and M–P (equivalent to 99,563 bp of the MCMV genome) purified by agarose gel electrophoresis of the respective HindIII-digested plasmids. Similarly, library II (equivalent to 106,408 bp of the MCMV genome) was constructed using equimolar amounts of HindIII-purified fragments B–D, F, and L. Fragment E DNA (22,749 bp) was not included in the libraries. For expression library construction, the purified HindIII fragments 066–33(1,066–33,141 bp) were further fragmented by partial restriction enzyme digestion using a combination of BclI, BglII, BamHI (library I), or Sau3AI (library II) to generate BamHI compatible ends and ligated to BamHI cut pcDNA4 HisMax (Invitrogen, Carlsbad, CA). The pcDNA4 HisMax A, B, and C vectors allow expression of DNA in each reading frame by staggered insertion of DNA fragments downstream of a QBI SP163 translational enhancer. Characterization of a subset of clones showed that insert frequencies were 92 (I) and 83% (II), and the average insert sizes were 1,130 (I) and 530 bp (II). Approximately 30,000 independent clones (library I) and 25,000 independent clones (library II) were arrayed in pools of 50 clones per pool. DNA for transfections was prepared using Qiagen 96 Turbo-Prep plates (Qiagen, Valencia, CA).

Library screening

The libraries were screened using K41 cells, an SV-40 transformed H-2b fibroblast line (gift of M. Michalek, University of Alberta, Edmonton, Alberta, Canada), that were seeded at 5000 cells/well in a 96-well plate 24 h before transfection. For transfections, 100 ng (per pool) of library DNA was mixed with OptiMem (Invitrogen) and 1 µl of the transfection reagent Fugene-6 (Roche, Basel, Switzerland) and added to plated K41 cells using standard protocols. Wells were supplemented with medium 2 h after transfection and incubated at 37°C. At 48 h, 2000 T cells/well (clones 3 and 55 derived as previously described in Ref. 3) were added to the transfected K41s. After 8 h, supernatants were collected and assayed for TNF-{alpha} by bioassay using the TNF-{alpha}-sensitive indicator cell line WEHI164/clone 20, derived (S. P. Fling, unpublished data) from WEHI164 (CRL-1751; American Type Culture Collection, Manassas, VA) that is similar to that described by Khabar et al. (25).

Epitope identification

One pool of 50 DNA clones from library II was confirmed to elicit a positive response by two Db-restricted MCMV-specific CTL clones (clones 3 and 55). From the positive pool, individual bacterial clones were derived and DNA was prepared and screened as described above. Individual bacterial clones that stimulated the CTL clones were sequenced. DNA was confirmed to be MCMV sequence. Peptides were synthesized based on an algorithm of optimal Db peptide-binding motifs (http://bimas.dcrt.nih.gov/molbio/hla_bind).

CTL line and clones

Generation and maintenance of CTL clones 3 and 55 have been previously described (3). A polyclonal M45-specific CTL line was generated by methods previously described (23). Briefly, 1.5 x 107 splenocytes from Kb-/- mice chronically infected with MCMV were incubated for 4 days with clone medium (RPMI with 10% FBS, 10-5 M 2-ME, and 10% rat con A supernatant) and the M45 peptide at a concentration of 10-10 M. Recombinant human IL-2 (100 U) was added on day 4 and the medium was replaced with fresh clone medium. The cells were used 7 days after one round of stimulation with the M45 peptide.

Viruses

MCMV Smith was purchased from American Type Culture Collection (1399-VR). {Delta}MC96.24 ({Delta}m152) and rMC96.27 (wild-type rescuant) (10), {Delta}MS94.5 (lacking open reading frames m151–165) (9), BAC-derived wild-type virus MW97.01 (26), and {Delta}m152-MW99.05 (3) have been described.

Mice

Six-week-old female C57BL/6 mice were purchased from Simonsen Laboratories (Gilroy, CA). Kb-/- mice, the gift of F. Lemmonier (Institute Pasteur, Paris, France), were maintained in our animal facilities at Oregon Health and Science University (Portland, OR) and were used in experiments no earlier than 6 wk postbirth.

CTL assays

Either IFN-{gamma}-pretreated, B6 mouse embryo fibroblasts (MEF) or untreated JAWS II cells (CRL-11904; American Type Culture Collection) were used as virus-infected targets. The addition of IFN-{gamma} to JAWS II cells does not alter Ag presentation to MCMV-specific CD8s and therefore was not added to the cultures (M. C. Gold, unpublished data). Cells were infected with 50 PFU (except when noted) of virus for 16 h in the presence of 300 µg/ml phosphonoacetic acid (PAA; Sigma-Aldrich, St. Louis, MO) to prevent L gene expression. IE only or IE and E gene expression were enhanced as previously described (15). Briefly, to selectively enhance IE gene expression, B6 targets were infected with MCMV in the presence of cycloheximide (50 µg/ml; Sigma-Aldrich) followed by actinomycin D (5 µg/ml; Sigma-Aldrich). For IE and E gene expression, cells were infected in the presence of cycloheximide alone followed by a 3-h incubation without drugs. For peptide screening, 104 51Cr-labeled RMA-S target cells were incubated with peptide at the concentrations indicated and plated with CTL clones at an E:T ratio of 15:1. After 5 h, the amount of radioactivity (cpm) in the supernatant was counted using a TopCount (Packard Instrument, Meriden, CT). The percentage of specific lysis was determined from the following equation: ((cpm experimental release - cpm medium release)/(cpm total release - cpm medium release)) x 100.

ICS assay

Splenocytes were isolated from MCMV-infected mice. APC (JAWS II cells) were infected with MCMV ({Delta}m152-MW99.05) at an MOI of 100 for 16 h in the presence of PAA. Effector splenocytes were incubated with peptide at various concentrations, or at a ratio of 1:1 with infected or uninfected JAWS II cells for 5 h in the presence of brefeldin A (GolgiPlug; BD PharMingen, Franklin Lakes, NJ). Cells were washed, incubated with FcBlock (BD PharMingen), and surface stained with an Ab to the CD8{alpha} chain (BD PharMingen). Cells were then fixed and permeabilized using BD PharMingen’s Cytofix/Cytoperm kit before staining with an Ab to IFN-{gamma} (BD PharMingen). CD8+ T cells were analyzed by flow cytometry using FACS in conjunction with CellQuest software (BD PharMingen). All further analyses were performed using FlowJo software (Treestar, San Carlos, CA).

RMA-S stabilization assay

HGIRNASFI and KHGIRNASFI peptides were titrated from 10-6 to 10-13 M in RPMI supplemented with 10% FBS, added to RMA-S cells, and incubated overnight at 23°C. The next day, the cells were washed four times in PBS (pH 7.4) at 23°C to remove excess peptide and incubated at 37°C for 4 h. Only peptide-loaded class I MHC is stable at the cell surface at this temperature (27). Cells were washed, then surface stained using the Db-specific mAb B22.249 (American Type Culture Collection) followed by FITC-conjugated goat anti-mouse IgG (Kirkegaard & Perry Laboratories, Gaithersburg, MD), and analyzed by flow cytometry as above.


    Results
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
Db-restricted CTL clones isolated from a mouse infected with virus lacking m152 recognize an E gene-encoded Ag

A panel of CTL clones was isolated from B6 mice infected with various MCMV strains (3) and was used to screen an expression library of random MCMV DNA fragments, as described in Materials and Methods. Two CTL clones (clones 3 and 55) were isolated from mice infected with the MCMV mutant {Delta}MS94.5, which lacks 14 genes including m152 (9). Clones 3 and 55 have been previously shown to be Db restricted (3). Drug blockade experiments either to limit herpesvirus gene expression to IE genes or to allow E gene expression while blocking L gene expression indicated that clone 3 was specific for an E Ag (Fig. 1GoA). E gene expression occurs in waves, with m152 expression occurring in the earliest wave, 2 h postinfection (5, 20). We predicted that Ags expressed after m152 is expressed would be most susceptible to the effects of m152. To determine when in the infectious cycle the Ag recognized by clone 3 is expressed, we asked when it could be presented if m152 were absent. To this end, we infected cells with virus lacking m152 and used intracellular cytokine staining (ICS) to determine how many hours of infection were required for Ag recognition by clone 3. The presence of brefeldin A in the ICS assay precludes further export of MHC class I in the infected cells and thus restricts the MHC-peptide complexes detected to those already at the cell surface at the indicated time postinfection. Fig. 1GoB shows that clone 3 first detected Ag 6 h postinfection, and that recognition increased thereafter (Fig. 1GoB). This is well after m152 expression, which commences 2 h postinfection (5, 20). To confirm that the assay was capable of detecting Ag expression earlier in the infectious cycle we included for comparison another MCMV-specific CTL clone. Fig. 1GoB shows that clone 11 detected Ag by 4 h postinfection and showed quite different kinetics. Therefore, clone 3 detects an Ag expressed in the infectious cycle after m152 is active. We concluded that the Ag recognized by clone 3 would be a useful indicator with which to investigate the effect of the immunomodulatory genes on immunodominance.



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FIGURE 1. A, Clone 3 recognizes an E MCMV Ag. B6 MEF were infected with {Delta}MS94.5 (lacks m152) under conditions that restrict MCMV gene expression to IE genes only (left panel) or to IE and E gene expression (right panel). B, Clone 3 recognizes an E Ag expressed later in E gene expression. B6 MEF were infected with {Delta}MS94.5 at an MOI of 50 for the times indicated in the absence of PAA, or for 16 h in the presence of PAA. CTL clones were then incubated with these cells for 5 h in the presence of brefeldin A (inhibiting further Ag expression) and analyzed by ICS. Ag presentation to clone 3 was first detected at 6 h postinfection; in contrast, clone 11, specific for a Kb-restricted E Ag (data not shown), detected Ag at 4 h postinfection.

 
Db-restricted CTL clones recognize aa 985–93 of M45

From the MCMV genomic expression library, we identified a plasmid that both CTL clones 3 and 55 recognized. This plasmid encoded a small fragment of the M45 gene (28). Based on the published MCMV sequence (28) and the corrected addition of a cytosine at nucleotide position 61918 of the MCMV genome (29), M45 encodes a 1174-aa protein that is homologous to human CMV UL45 and to the large subunit of the class Ia murine ribonucleotide reductase gene (28).

From the translated sequence of the expressed M45 fragment, we predicted four potential Db-binding peptides that were synthesized and used to sensitize RMA-S cells for lysis by clones 3 and 55 in a 51Cr release assay. Fig. 2Go shows that both the 9-mer HGIRNASFI (aa 985–993) and the 10-mer KHGIRNASFI (aa 984–993) were equally able to sensitize targets for killing by clones 3 and 55. Both peptides sensitized targets down to 10-12 M. As a measure of the relative affinity of HGIRNASFI and KHGIRNASFI, we compared their ability to stabilize cell surface Db in the TAP-deficient cell line, RMA-S (27). As shown in Fig. 3Go, the 9-mer and the 10-mer were equally effective at stabilizing cell surface Db. It is likely that the 9-mer represents the minimal epitope with the histidine residue occupying the A pocket of Db (30).



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FIGURE 2. Clones 3 and 55 recognize HGIRNASFI and KHGIRNASFI peptides. Clones 3 and 55 were used as effectors in a 51Cr release assay using RMA-S target cells loaded with four peptides titrated from 10-7 to 10-13 M.

 


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FIGURE 3. HGIRNASFI and KGHIRNASFI are equally able to stabilize the Db class I molecule. Peptide stabilization of cell surface Db on RMA-S cells was analyzed by flow cytometry as described in Materials and Methods. Data are representative of two separate experiments.

 
Detection of M45985–93-specific CD8s directly ex vivo

We next determined whether we could detect HGIRNASFI-specific CD8 T cells directly ex vivo. Because of the low frequency of CD8s responding to previously identified E Ags, we optimized our chances of detecting (K)HGIRNASFI-specific CD8 T cells in vivo by looking at the peak of the response in mice whose only class I molecule is Db. Kb-/- mice were infected with the MCMV mutant {Delta}MS94.5 (which lacks 14 genes, including m152). The ICS assay was used to quantify the frequency of M45-specific CD8+ spleen cells from acutely infected mice. Over 20% of all CD8+ splenocytes from Kb-/- mice infected for 6 days with {Delta}MS94.5 were (K)HGIRNASFI-specific (Fig. 4Go). We were encouraged by the strength of this response to look at the CD8 T cell response in chronically infected B6 mice. Fig. 4Go shows the result from a representative mouse infected with MCMV-{Delta}m152 for 1.5 years, in which 2.5% of CD8+ splenocytes recognized the (K)HGIRNASFI peptides (Fig. 4Go). Finally, no response to HGIRNASFI was detected in a naive B6 mouse, while in the same assay 4% of CD8s from a mouse infected with {Delta}MS94.5 for 12 wk made IFN-{gamma} in response to HGIRNASFI (Fig. 5Go). In another experiment with four B6 mice chronically infected with viruses lacking m152, between 1 and 4% of CD8s were specific for HGIRNASFI, whereas <0.3% of CD8s were positive in two naive mice (data not shown). Other experiments suggest that the difference in the magnitude of the HGIRNASFI-specific responses seen in Fig. 4Go is most likely to be due to differences between the acute and chronic phase of the CD8 response rather than a difference between Kb-/- mice and B6 mice. Future studies are planned to determine whether the HGIRNASFI-specific response changes in its relative proportion to the total MCMV-specific response over time in mice chronically infected with MCMV.



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FIGURE 4. Both acutely infected Kb-/- mice and chronically infected B6 mice generate M45-specific responses. Using the ICS assay, CD8+ splenocytes were tested for their ability to respond to M45 peptides. Peptides were titrated from 10-7 to 10-13 M and were incubated with ex vivo splenocytes in the presence of brefeldin A for 5 h. CD8s were analyzed by ICS. Left panel, CD8s were from a Kb-/- mouse infected with {Delta}MS94.5 for 6 days. Right panel, CD8s were from a B6 mouse infected with {Delta}m152-MW99.05 for 1.5 years. In two similar experiments using at least two mice per group, similar numbers of CD8s responded to 10-8 M peptide.

 


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FIGURE 5. Naive mice do not respond to HGIRNASFI. Splenocytes from B6 mice infected with {Delta}MS94.5 for 12 wk or naive mice were tested by ICS for their response to peptide (10-7 M). The number in the upper right quadrant represents the percentage of CD8s that produced IFN-{gamma}. Two mice were tested under each condition; one representative analysis is shown. Data are representative of three experiments.

 
m152 ablates recognition of infected target cells by M45-specific CTL

The effects of the immunomodulatory gene m152 on M45 presentation in vitro are profound. Fig. 6GoA shows that clones 3 and 55 were unable to kill fibroblasts infected with three different wild-type MCMV strains. However, this defect was reversed if m152 was absent: clones 3 and 55 were able to kill fibroblasts infected with three different MCMV mutants lacking m152. m152 was equally effective at inhibiting presentation of M45 in MEFs and the dendritic cell (DC) line, JAWS II, that was used as the APC in the ICS assays. Fig. 6GoB shows a CTL assay using a polyclonal M45-specific CTL line: wild-type infected targets were not recognized, whereas {Delta}m152-infected targets were readily lysed. We also tested this line for IFN-{gamma} release by ICS, using both MEFs and JAWS II cells as APCs. Wild-type MCMV-infected MEFs and JAWS II cells failed to stimulate IFN-{gamma} secretion, whereas both cell types infected with MCMV-{Delta}m152 did stimulate IFN-{gamma} secretion (data not shown). We conclude that m152 effectively inhibits presentation of HGIRNASFI in both MEFs and a DC line.



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FIGURE 6. A, m152 prevents Ag recognition by clones 3 and 55. Clones 3 and 55 were tested in a CTL assay with three different wild-type MCMV strains or with three mutants lacking m152; only the mutants were recognized. These results are typical of multiple experiments. B, m152 interferes with the ability of an M45-driven CTL line to kill both MEFs and JAWS II target cells infected with MCMV. M45-specific effectors were splenocytes from Kb-/- mice infected with wild-type MCMV stimulated in vitro with 10-10 M HGIRNASFI peptide for 1 wk. Target cells were either B6 MEFs or JAWS II cells infected as indicated. The reduced killing on wild-type-infected targets compared with the killing seen on uninfected targets is frequently seen using polyclonal CTL and may reflect NK activity. A duplicate of this experiment showed similar results.

 
m152 does not affect the immunodominance of M45 in vivo

Because m152 appeared able to completely prevent presentation of M45, we hypothesized that mice infected with a wild-type (m152+) MCMV would not develop an M45-specific CTL response. To test this prediction, we infected Kb-/- mice with wild-type MCMV (Smith), {Delta}MS94.5, {Delta}MC96.24 ({Delta}m152), and the rescued virus rMC96.27 ({Delta}MC96.24 with m152 restored). Fig. 7Go shows that, surprisingly, the percentage of CD8s recognizing M45 was very similar in each infection: between 12 and 13% of CD8+ splenocytes on day 8 postinfection were specific for M45.



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FIGURE 7. m152 does not affect the M45-specific response in acutely infected Kb-/- mice. Shown is quantification by ICS assay of HGIRNASFI-specific CD8+ splenocytes from Kb-/- mice infected for 8 days with wild-type (Smith), {Delta}MS94.5, {Delta}MC96.24 ({Delta}m152), and rMC96.27 (revertant) viruses. The number in the corner indicates the percentage of CD8 T cells specific for M45. Similar results were seen in two separate experiments with two mice per group.

 
Although mice infected with wild-type virus made a response to M45, we reasoned that m152 might nevertheless affect the immunodominance of M45 within the hierarchy of the total CD8 response to MCMV. We were unable to test this hypothesis by comparing the M45 response to other specific peptides because no other H-2b-restricted epitopes have yet been identified. Instead, we calculated the ratio of the M45-specific response to the response we could detect to the whole virus, which was assessed using virus-infected APCs in the ICS assay. This time we used B6 mice, where Db-HGIRNASFI also competes with Kb-restricted responses for immunodominance. Five mice were infected with the MCMV mutant {Delta}m152 ({Delta}MC96.24) or the rescuant (rMC96.27) MCMV strains for 8 days. Fig. 8Go shows that CD8 T cell responses to MCMV ({Delta}m152)-infected DCs ranged from 3 to 11%. No remarkable differences were seen in the CD8 T cell responses to virus-infected APC after MCMV infection with or without m152. This indicated that m152 did not affect the total numbers of MCMV-specific CD8 T cells that were generated in vivo. This assay also allowed a rough assessment of the immunodominance of M45 within the total MCMV-specific CD8 response. While the HGIRNASFI peptide stimulation probably detects all CD8s of this specificity, it is likely that simulation with virus-infected DCs underestimates the total number of MCMV-specific CD8s. Therefore, we conclude that, while a substantial number of CD8s recognized HGIRNASFI, other specificities exist. Finally, we compared the HGIRNASFI-specific response to the detectable response to whole virus after infection with MCMV with or without m152. Although there was mouse to mouse variation, the ratio of the peptide-specific response to the total MCMV-specific response did not differ significantly (p = 0.39). The ratio of the M45-specific CD8 T cell response to the total MCMV-specific CD8 response averaged among five mice (expressed as a percentage) was 62.1% after MCMV{Delta}m152 infection vs 72.8% after infection with the rescuant (Fig. 8Go and Table IGo). These data again indicate that m152 did not alter the immunodominance of the M45 Ag.



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FIGURE 8. m152 does not affect the immunodominance of M45 in acutely infected B6 mice. HGIRNASFI-specific and total MCMV-specific responses were compared by ICS assay. Splenocytes from B6 mice infected for 8 days with {Delta}m152 ({Delta}MC96.24) or revertant (rMC96.27) were incubated for 6 h either with 10-8 M HGIRNASFI peptide or with {Delta}m152-infected JAWS II cells used as APCs. Data are representative of three experiments with a minimum of two mice per group.

 

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Table I. Calculated ratio of the HGIRNASFI-specific response to the response to virus-infected APCs1

 

    Discussion
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
Identification of an immunodominant MCMV CTL Ag in B6 mice

In this paper we describe the use of CTL clones and a genomic fragment library to identify an immunodominant epitope in MCMV. Identification of CTL epitopes in large viruses remains a difficult procedure, and several points in the method described here are worthy of note. To initially isolate the CTL clones we screened clones for their ability to kill targets infected with a virus ({Delta}MS94.5) that lacks the key immune evasion gene, m152. The CTL clones used in this paper were generated from {Delta}m152-infected mice, but we have also generated clones from wild-type-infected mice (3); CTL clones from both types of infection were able to lyse {Delta}MS94.5-infected targets but not wild-type-infected targets. Thus, the use of a virus lacking immune evasion genes to screen CTL clones was critical for isolation of these clones. M45 is immunodominant in wild-type infection, but clones of this specificity would not have been identified had we used wild-type virus in our initial screen. The use of viruses lacking immune evasion genes for screening clones may also be useful in identifying new CTL epitopes in other viruses such as human CMV, HSV, and Kaposi’s sarcoma-associated herpesvirus.

The second feature of the strategy described here was the use of a viral genomic fragment library. This strategy has previously been applied successfully to identify epitopes in Chlamydia and HSV (S. P. Fling, unpublished results). If a pathogen’s genomic DNA can be obtained independently of the host genome this approach can be useful, because it eliminates contaminating host transcripts that would be expressed in a cDNA library and which would increase the clonal complexity of the library. Another advantage of expression cloning in general is the potential to identify both dominant and subdominant epitopes. We do not yet know whether genomic libraries constructed by restriction digest express all possible epitopes. Clearly, if a restriction site coincides with the portion of DNA encoding an epitope, representation may be limited. However, this problem is abrogated to some extent by partial restriction digests of input DNA.

The M45 epitope is clearly recognized by a substantial fraction of MCMV-specific CD8s in B6 mice. Identification of other epitopes is necessary before we can determine whether it is the most immunodominant epitope in this strain. The only other immunodominant MCMV epitopes identified so far are for the H-2d haplotype: epitopes from pp89 (Ld-restricted) (12, 13) and m164 (Dd-restricted) (23) have been described. Reddehase and colleagues (21, 23) injected MCMV into the footpad, measured the CTL response using an ELISPOT assay, and determined that ~0.7% of CD8s in the spleens of chronically infected BALB/c mice were specific for each of these epitopes. These authors used the number of CD8s that made IFN-{gamma} in response to anti-CD3 (~2%) to identify previously activated CD8s and argued that this number approximated the total MCMV-specific memory population. Based on this assumption they concluded that most MCMV-specific CD8s in BALB/c mice are specific for either pp89 or m164. Very recently, Ye et al. (14) used a protocol similar to the one we used in the current paper and determined that pp89-specific CD8s made up close to 3% of CD8s 1 mo after infection. We measured a similar response to pp89 (4% of CD8s) in one experiment in BALB/c mice (M. C. Gold, unpublished observation). We think it more likely that differences in infectious route and method of detecting the response, rather than between BALB/c and B6 mice per se, will be found to account for these differences in the measured size of the response. It will be interesting to perform side by side comparisons using the same methods to determine the relative size of the overall MCMV-specific response in both mouse strains, as well as the proportion of that response that can be attributed to the currently identified epitopes.

m152 affects presentation of M45 without affecting its immunodominance

The hypothesis that m152 would affect the hierarchy of immunodominant CD8 epitopes is based on the fact that m152 severely impairs Ag processing and presentation in fibroblasts. However, our work demonstrates that the CD8 T cell response to M45 is not affected by the presence of m152 in vivo even though its presentation is severely affected by m152 in vitro. We can think of two possible explanations for this surprising result. First, Ag presentation in some important cell types in vivo, such as macrophages or DCs, may not be affected by m152 in the same way that fibroblasts are affected in vitro. It has been reported that macrophages can overcome the effect of immune evasion genes and effectively present the IE pp89 Ag (31). However, our experience is that M45-specific CTL clones are unable to kill wild-type virus-infected macrophages, even though they readily kill {Delta}m152-infected macrophages (D. LoPicollo, M. Gold, D. Kavangh, M. Wagner, U. Koszinowski, and A. Hill, manuscript in preparation). Similarly, we show in this paper that m152 effectively prevents Ag presentation in a DC line. Thus, while it remains possible that presentation of M45 by an infected cell in vivo is not affected by m152, there is currently no evidence to support that hypothesis.

A second explanation for the lack of effect of m152 on the immunodominance of M45 could be that cross-presentation is the principle mechanism for priming the CD8 T cell population to M45 in vivo. Cross-presentation is the process by which DCs take up Ag from infected cells and present it on newly synthesized class I molecules. Presumably m152, a glycoprotein that acts in the ER, only affects Ag presentation in infected cells and does not affect cross-presentation. Cross-presentation is believed to be an important mechanism by which CD8 T cells are primed in vivo (32, 33), and it is thus perhaps not surprising that M45-specific CD8 T cell responses would be elicited in wild-type MCMV-infected mice. Nevertheless, if cross-presentation is the main mechanism used for priming the CTL response, this could potentially be problematic for the immune response. If the Ags presented by cross-priming are different from those presented directly by virus-infected cells, then the immune response may be fooled into making a CTL response that is ineffective in clearing virus-infected cells. Indeed, we had assumed the CD8 T cell response would focus on Ags that are efficiently presented by virus-infected cells in vivo. In an attempt to reduce in vitro artifact, we assessed the efficacy of immune evasion genes using virus infections (rather than transfections) of primary untransformed murine fibroblasts, as well as a DC line. In these assays m152 prevented recognition of the M45-encoded epitope. However, we do not yet know how effective M45-specific CD8s are in vivo against wild-type virus or, indeed, for which infected cell types in vivo CD8 control is most important. However, we do note that MCMV is effectively controlled by the immune response and that CD8 T cells play an important role in this control. Future studies will address these issues.


    Footnotes
 
1 This work was funded by Corixa and by grants from the National Institutes of Health (A107474), the American Heart Association (9650521N), and the Pew Charitable Trusts (P0176SC). Back

2 Address correspondence and reprint requests to Dr. Ann B. Hill, Department of Molecular Microbiology and Immunology, L220, Oregon Health and Science University, 3181 SW Sam Jackson Park Road, Portland, OR 97201. E-mail address: hillan{at}ohsu.edu Back

3 Abbreviations used in this paper: MCMV, murine CMV; DC, dendritic cell; PAA, phosphonoacetic acid; ER, endoplasmic reticulum; ICS, intracellular cytokine staining; MEF, mouse embryo fibroblast; IE, immediate early; E, early; L, late. Back

Received for publication December 20, 2001. Accepted for publication April 30, 2002.


    References
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 

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