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The Journal of Immunology, 2002, 169: 271-276.
Copyright © 2002 by The American Association of Immunologists

Unraveling of the Polymorphic C{lambda}2-C{lambda}3 Amplification and the Ke+Oz- Polymorphism in the Human Ig{lambda} Locus

Mirjam van der Burg, Barbara H. Barendregt, Ellen J. van Gastel-Mol, Talip Tümkaya, Anton W. Langerak and Jacques J. M. van Dongen1

Department of Immunology, Erasmus University Rotterdam/University Hospital Rotterdam, Rotterdam, The Netherlands


    Abstract
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
Two polymorphisms of the human Ig{lambda} (IGL) locus have been described. The first polymorphism concerns a single, 2- or 3-fold amplification of 5.4 kb of DNA in the C{lambda}2-C{lambda}3 region. The second polymorphism is the Mcg-Ke+Oz- isotype, which has only been defined via serological analyses in Bence-Jones proteins of multiple myeloma patients and was assumed to be encoded by a polymorphic C{lambda}2 segment because of its high homology with the Mcg-Ke-Oz- C{lambda}2 isotype. It has been speculated that the Mcg-Ke+Oz- isotype might be encoded by a C{lambda} gene segment of the amplified C{lambda}2-C{lambda}3 region. We now unraveled both IGL gene polymorphisms. The amplification polymorphism appeared to result from a duplication, triplication, or quadruplication of a functional J-C{lambda}2 region and is likely to have originated from unequal crossing over of the J-C{lambda}2 and J-C{lambda}3 region via a 2.2-kb homologous repeat. The amplification polymorphism was found to result in the presence of one to five extra functional J-C{lambda}2 per genome regions, leading to decreased Ig{kappa}:Ig{lambda} ratios on normal peripheral blood B cells. Via sequence analysis, we demonstrated that the Mcg-Ke+Oz- isotype is encoded by a polymorphic C{lambda}2 segment that differs from the normal C{lambda}2 gene segment at a single nucleotide position. This polymorphism was identified in only 1.5% (2 of 134) of individuals without J-C{lambda}2 amplification polymorphism and was not found in the J-C{lambda}2 amplification polymorphism of 44 individuals, indicating that the two IGL gene polymorphisms are not linked.


    Introduction
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
The human Ig{lambda} (IGL)2 locus is located on chromosome band 22q11.2 and spans a region of about one megabase (1). The IGL locus contains 73–74 V{lambda} gene segments, including 56–57 functional V{lambda} segments, which could be assigned to 11 subgroups based on nucleotide homology (1, 2, 3, 4, 5, 6) (http://imgt.cnusc.fr:8104). Seven J-C{lambda} gene regions are located downstream of the V{lambda} segments. Each C{lambda} gene segment is preceded by a J{lambda} gene segment. Only four J-C{lambda} gene regions are functional: i.e., J-C{lambda}1, J-C{lambda}2, J-C{lambda}3, and J-C{lambda}7; the regions J-C{lambda}4, J-C{lambda}5, and J-C{lambda}6 are nonfunctional (pseudo) gene regions (7, 8, 9). This is due to a deletion of ~1150 bp in the J-C{lambda}4 region and the lack of some of the essential nucleotides in the recombination signal sequence (RSS) (3) of the J{lambda}4 gene segment (7, 10). In the 3' end of the C{lambda}5 exon, 11 bp are deleted, and the RSS of the J{lambda}5 segment also lacks some of the essential nucleotides (7, 10). Finally, the C{lambda}6 exon contains a duplication of four nucleotides, which results in a premature stop codon (7, 9). Rearrangements of the J-C{lambda}6 segment can occur, but they encode a truncated Ig{lambda} protein (11).

The four different functional types of Ig{lambda} L chains have also been identified in human serum using the serological isotype markers Mcg, Kern (Ke), Oz, and Mcp (11, 12, 13, 14). These serological isotype markers are based on amino acid differences found in the C{lambda} regions of various Bence-Jones proteins derived from multiple myeloma patients as well as from Ig{lambda} L chains isolated from intact Igs. The four functional J-C{lambda} gene regions, J-C{lambda}1, J-C{lambda}2, J-C{lambda}3, and J-C{lambda}7, encode the isotypes Mcg+Ke+Oz-, Mcg-Ke-Oz-, Mcg-Ke-Oz+, and Mcp+, respectively. A fifth isotype, termed Mcg-Ke+Oz-, is highly homologous to Mcg-Ke-Oz- and is assumed to be encoded by a polymorphic C{lambda}2 gene segment, but this has not yet been confirmed by sequence analysis at the DNA level.

The human IGL locus also contains an ~5.4-kb amplification polymorphism in the C{lambda}2-C{lambda}3 region. As the amplified region can be present once, twice, or three times; this amplification might result in up to 10 J-C{lambda} gene regions per allele (3, 15, 16, 17). The polymorphic C{lambda}2-C{lambda}3 amplifications can be identified via Southern blot (SB) analysis as EcoRI fragments of 13.7, 19.1, or 24.5 kb, representing one, two, or three amplifications, respectively (15, 18). In the absence of an IGL amplification polymorphism, only an 8.3-kb EcoRI fragment is detected. In HindIII-digested DNA, the IGL polymorphism is visible as a 5.4-kb fragment, independent of the number of amplified regions (18). It has been reported that the frequency of the C{lambda}2-C{lambda}3 amplification polymorphism varies between populations in different geographical areas (3, 16, 17), but this polymorphism has not been fully characterized in detail.

Here we studied both the C{lambda}2-C{lambda}3 amplification polymorphism and the Mcg-Ke+Oz- polymorphism. Our aim was to investigate whether the Mcg-Ke+Oz- isotype is encoded by a polymorphic C{lambda}2 gene segment and whether the C{lambda} segment encoding this isotype is located on the amplified C{lambda}2-C{lambda}3 fragment, implying that the two IGL polymorphisms might be linked, as speculated previously (8, 14). Furthermore, we assessed the structure of the C{lambda}2-C{lambda}3 amplification polymorphism and determined whether the amplified region contains functional J-C{lambda} segments that might lead to higher frequencies of Ig{lambda} protein expression.


    Materials and Methods
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
Cell samples

Peripheral blood (PB) samples were obtained from 96 healthy individuals. The expression of Ig{kappa} and Ig{lambda} on PB B cells was determined via Ig{kappa}/CD19 and Ig{lambda}/CD19 two-color immunofluorescence in 69 cases. DNA was isolated from the granulocytes of all 96 healthy individuals using phenol/chloroform extraction (18). In addition, DNA samples from 82 precursor-precursor B cell acute lymphoblastic leukemia samples and Ig{kappa}+ B cell chronic lymphocytic leukemia with both IGL alleles in germline configuration were analyzed for the presence of the Mcg-Ke+Oz- polymorphism (19, 20).

Southern blot analysis

Fifteen micrograms of DNA from 80 healthy controls (60 of Caucasoid origin and 20 of Chinese origin) was digested with EcoRI (Life Technologies, Gaithersburg, MD), separated in 0.7% agarose gels, and transferred by vacuum blotting to Nytran-13N nylon membranes (Schleicher & Schuell, Dassel, Germany) (18). The filters were hybridized with the 32P-labeled {lambda}-IVS probe (15).

PCR analysis and fluorescent sequencing of the amplified C{lambda}2-C{lambda}3 region

Specific PCR primers for the C{lambda}2-C{lambda}3 amplification polymorphism (IGLamp-F and IGLamp-R) were designed using the OLIGO 6.2 software program (Dr. W. Rychlik, Molecular Biology Insights, Cascade, CO; Table IGo). PCR analysis was performed with the Expand Long Template PCR System (Roche Diagnostics, Mannheim, Germany) according to the manufacturer’s instructions. PCR products were analyzed on a 1% agarose gel and purified using a PCR purification kit (Qiagen, Hilden, Germany) before fluorescent sequencing. PCR products were sequenced on an ABI 377 fluorescent cycle sequencer (PE Applied Biosystems, Foster City, CA) with Big Dyes (PE Applied Biosystems) according to the manufacturer’s instructions. The original PCR primers were used as sequence primers, and subsequently new sequence primers were designed in the newly sequenced regions. An extra PCR was performed using the primers Up-F and Down-R to sequence the gap between the primers IGLamp-R and IGLamp-F (see also Table IGo and Fig. 2GoB). The IGL gene sequence (accession no. X51755) was used as the reference sequence. Pairwise alignment algorithms were used from EMBL, European Bioinformatics Institute (Cambridge, U.K.; http://www.ebi.ac.uk/emboss/align/).


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Table I. Sequences of used primers for PCR analysis and/or sequencing of the IGL locus

 


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FIGURE 2. Strategy for PCR and sequencing analysis of the IGL amplification polymorphism. A, C{lambda}2-C{lambda}3 region without IGL amplification polymorphism (P0) with the primers IGLamp-R and IGLamp-F positioned just upstream of the HindIII restriction site. B, C{lambda}2-C{lambda}3 region with one polymorphic IGL amplification (P1) with the positions of the two IGLamp primers. PCR analysis with the primers IGLamp-F and IGLamp-R results in the generation of a fragment of ~5.4 kb. The PCR product generated with the IGLamp-F and IGLamp-R primers was totally sequenced starting with the PCR primers and subsequently with sequence primers designed in the newly generated sequence ("gene walking"). To analyze the region between the IGLamp-F and IGLamp-R primers, sequence analysis was performed using PCR products generated with primers Up-F and Down-R. The total sequenced region is indicated. C, PCR analysis with the primers IGLamp-F and IGLamp-R of one healthy individual without IGL amplification polymorphism (P0/P0) and three with an IGL amplification polymorphism (P0/P1, P0/P2, and P0/P3).

 
Analysis of the C{lambda}2 gene region for the presence of the Mcg-Ke+Oz- polymorphism

The C{lambda}2 region was amplified by PCR with the primers C{lambda}2-F and C{lambda}2-R (Table IGo) using the TaqGold amplification system (PE Applied Biosystems). The obtained PCR products were sequenced with the C{lambda}2-F primer and/or the C{lambda}2-Rseq primer (Table IGo) as described above.


    Results
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
Southern blot analysis of the C{lambda}2-C{lambda}3 amplification polymorphism in Caucasoid and Chinese individuals

The IGL locus of 80 healthy controls (60 of Caucasoid origin and 20 of Chinese origin) was analyzed with respect to the number of amplifications using the {lambda}-IVS probe in combination with EcoRI digests (Fig. 1GoA). Examples of Southern blot results for two individuals without a C{lambda}2-C{lambda}3 amplification polymorphism and four individuals with amplification polymorphisms are shown in Fig. 1GoB. Seventy-two percent of the Caucasians did not have the C{lambda}2-C{lambda}3 amplification polymorphism, in contrast to only 15% of the Chinese individuals (Table IIGo). The IGL locus of individuals without a C{lambda}2-C{lambda}3 amplification polymorphism on both alleles is described as P0/P0. In the group of Caucasoid individuals the frequency of monoallelic amplifications was 7, 15, and 7% for one, two, or three amplifications, respectively (P0/P1, P0/P2, and P0/P3). These percentages were comparable to the percentages in the Chinese individuals. However, 55% of the Chinese individuals had biallelic amplifications (P1/P2, P1/P3, P2/P2, and P2/P3), which were not observed in the Caucasoid individuals.



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FIGURE 1. Detection of the IGL amplification polymorphism of the C{lambda}2-C{lambda}3 region. A, Schematic representation of the IGL locus with the amplification polymorphism of the C{lambda}2-C{lambda}3 region. The EcoRI restriction sites, the position of the {lambda}-IVS probe, and the relevant restriction fragments are indicated. In cases without an IGL amplification polymorphism (P0) the {lambda}-IVS probe detects an 8.3-kb band. Dependent on the number of amplified regions (P1, P2, or P3), a 13.7-, 19.1-, or 24.5-kb band is detected, respectively. B, Southern blot analysis of EcoRI-digested DNA of six healthy controls with the {lambda}-IVS probe. Lanes 1 and 2, No IGL amplification polymorphism on both alleles (P0/P0); lanes 3, 4, and 6, one allele without IGL amplification polymorphism together with a polymorphic allele, P0/P1, P0/P2, and P0/P2, respectively; lane 5, two polymorphic alleles (P2/P3).

 

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Table II. Configuration of the IGL locus with respect to the number of IGL amplifications as determined by Southern blot analysis

 
Sequencing strategy of the C{lambda}2-C{lambda}3 amplification polymorphism

To date, the polymorphic C{lambda}2-C{lambda}3 amplification has never been sequenced, probably because of the complexity of the IGL locus, especially because of the high homology between the J-C{lambda}2 region and the J-C{lambda}3 region. The primers (IGLamp-F and IGLamp-R) were designed tail-to-tail, just upstream of the HindIII restriction site, such that in situations without polymorphic C{lambda}2-C{lambda}3 amplifications (P0/P0), no PCR product is formed (Fig. 2Go, A and C). In cases with a polymorphic amplification, a PCR product of ~5.4 kb was generated, independent of the number of amplifications (Fig. 2Go, B and C). The size of the PCR product was comparable to the size of the amplified region, as it was determined via Southern blot analysis using HindIII digests (18). The amount of PCR product was quantified using semiquantitative PCR with sampling after different cycles (7, 10, 13, 16, 19, and 22 cycles), followed by hybridization with the J-C{lambda}2-specific IGLC2D probe (19). The hybridization signals obtained correlated with the number of amplifications as determined via Southern blot analysis (data not shown). This result implies that in the case of multiple C{lambda}2-C{lambda}3 regions, all regions were represented in the sequence analysis. The 5.4-kb PCR product of four individuals with the genotypes P1/P2, P2/P2, P2/P2, and P0/P3 were completely sequenced. Sequence analysis was started with the IGLamp-F and IGLamp-R primers. Subsequently, sequence primers were designed in the newly generated sequence ("gene walking"). Finally, an extra primer set was designed to analyze the region between the two primers IGLamp-R and IGLamp-F by PCR and sequencing. The forward primer (Up-F) was designed in the newly generated sequence and the reverse primer (Down-R) downstream of the IGLamp-F primer (Fig. 2GoB). These primers also annealed in the homologous region just downstream of the J-C{lambda}2 region (Fig. 2GoB). The total sequenced region is indicated in Fig. 2GoB.

Structure of the C{lambda}2-C{lambda}3 amplification polymorphism

The region of the IGLamp-F IGLamp-R product together with the extended region that fills the gap between the ends of the two primers was further analyzed for the presence of restriction sites (Fig. 3GoA, white area). This sequence was subsequently aligned with the standard IGL gene sequence (P0) to determine the structure of the amplification. The first 2.5 kb of the sequenced region appeared to be homologous to the region downstream of C{lambda}2 gene segment (Fig. 3GoA, dotted lines) with 99.3% homology. The second part of the sequenced region (2.9 kb) shared the highest homology with the J-C{lambda}2 region (Fig. 3GoA, dashed lines), which was also 99.3%. It should be noted that there is a highly homologous region of 2.2 kb between the J-C{lambda}2 and J-C{lambda}3 regions, with a similarity of 98.7%. These homologous regions are indicated as gray areas. Fig. 3GoA represents the experimental approach for characterization of the IGL amplification, but does not reflect the mechanism. In Fig. 3GoB the actual positioning of the amplification polymorphism is depicted in the total structure of a P1 allele. The amplified region starts with a 2.2-kb homologous region and ends just before the 2.2-kb homologous region of J-C{lambda}3.



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FIGURE 3. Experimental approach for characterization of the IGL amplification polymorphism resulting in the actual positioning within the IGL locus. A, Schematic representation of the total sequenced region, as defined in Fig. 2GoB. For further sequence analysis the region of the IGLamp-F IGLamp-R product together with the extended region to fill the gap between the ends of the two primers was used (white area); the remaining sequence was excluded (dashed area). BamHI (B), BglII (Bg), EcoRI (E), and HindIII (H) restriction sites are indicated. The homologous repeats of the J-C{lambda}2 and J-C{lambda}3 regions with a similarity of 98.7% in the standard sequence (P0) are marked as gray areas. The first part of the sequence could be aligned with the region downstream of the C{lambda}2 gene segment (indicated with dotted lines) with a homology of 99.3%. The second part of the sequence was aligned with the J-C{lambda}2 region (indicated with dashed lines) and had a homology of 99.3%. B, The C{lambda}1-C{lambda}2-C{lambda}3 region of a polymorphic allele (P1) with the actual positioning of the polymorphic amplified region.

 
Due to the polymorphic amplification, a new HindIII is generated (Fig. 3GoB). SB analysis of HindIII-digested DNA from individuals with the amplification polymorphism will therefore show the 5.4-kb polymorphic HindIII fragment when using the {lambda}-IVS probe. Consequently, two and three (identical) repeats of the amplified region (P2 or P3) also result in 5.4-kb HindIII restriction fragments.

Sequence analysis of the J-C{lambda} region within the IGL amplification polymorphism

The J-C{lambda} region of the amplified IGL region shares the highest homology with the J-C{lambda}2 region. The J{lambda}2amp gene segment is identical with the J{lambda}2 except for one amino acid (Fig. 4Go). The RSS of the J{lambda}2amp was compared with the RSS of the seven other RSS and appeared to be identical with that of J{lambda}2 and J{lambda}3; it contained all essential nucleotides (Table IIIGo). The donor and acceptor splice sites of the J-C{lambda}2amp region were intact. The C{lambda}2amp gene segment was completely identical with the C{lambda}2 gene segment and also coded for the Mcg-Ke-Oz- (Table IVGo, comparison to all isotypes). Therefore, the IGL amplification polymorphism does not encode the Mcg-Ke+Oz- polymorphism and constitutes a different IGL polymorphism. Based on these data we conclude that the J-C{lambda}2amp region is functional. This conclusion was supported by homology search of the J{lambda}2amp segment using nucleotide BLAST (http://www.ncbi.nlm.nih.gov/BLAST), which resulted in a perfect match with >15 sequences of human mRNA for Ig{lambda} chains.



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FIGURE 4. The J{lambda} gene segment of the IGL amplification polymorphism (J{lambda}2amp) compared with the normal J{lambda}2 region. The segments differ at two nucleotide positions, of which only one results in an amino acid substitution (V->G).

 

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Table III. RSS of all J{lambda} gene segments as compared to the consensus RSS

 

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Table IV. The five Ig{lambda} isotypes described by the serological markers Mcg, Ke, Oz, and Mcp

 
Effect of the number of IGL amplifications on the Ig{kappa}:Ig{lambda} ratio on PB B cells

As sequence analysis of the J-C{lambda} region on the IGL amplification showed that this region can undergo gene rearrangements and can be expressed, we studied the effect of the number of functional J-C{lambda} regions on the frequency of Ig{lambda}-positive B lymphocytes, by determining the Ig{kappa}:Ig{lambda} ratio on normal PB B cells. The combined Southern blot and Ig{kappa}:Ig{lambda} ratio data are summarized in Table VGo. The human IGL locus contains four functional J-C{lambda} regions, meaning that in cases without IGL amplification polymorphisms (P0/P0) a total of eight functional J-C{lambda} regions are present. In cases with the IGL amplification polymorphism, every amplified region represents one additional functional J-C{lambda} region. The Ig{kappa}:Ig{lambda} ratio of cases with an amplification (resulting in 9–13 functional J-C{lambda} gene regions) was significantly lower than the Ig{kappa}:Ig{lambda} ratio of cases without amplification (8 J-C{lambda} gene regions): 1.37 ± 0.18 vs 1.56 ± 0.26 (by t test, p < 0.001). One additional J-C{lambda} gene region appeared to be sufficient for a decrease in the Ig{kappa}:Ig{lambda} ratio (Table VGo).


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Table V. Mean Ig{kappa}/g{lambda} ratios for different numbers of functional J-C{lambda} gene regions

 
Frequency of Mcg-Ke+Oz- C{lambda}2 polymorphism

The sequence data demonstrated that the IGL amplification polymorphism does not coincide with the Mcg-Ke+Oz- polymorphism. Therefore, it is most likely that the Mcg-Ke+Oz- polymorphism is encoded by a polymorphic C{lambda}2 gene segment. This implies that at the DNA level the codon AGC for serine (S) at position 152 must be changed in GGC for glycine (G), which is the serological marker Ke+. The C{lambda}2 region of 178 individuals was analyzed for the presence of the Mcg-Ke+Oz- polymorphism. The group consisted of 96 healthy controls (granulocyte DNA) as well as 82 precursor B cell acute lymphoblastic leukemia and Ig{kappa}+ B cell chronic lymphocytic leukemia samples, without IGL gene rearrangements, as determined by Southern blot analysis (19, 20). All samples were first screened with the IGLamp-F and IGLamp-R primers to define cases with the IGL amplification polymorphism. Twenty-five percent of cases (44 of 178) appeared to have the IGL amplification polymorphism. In cases without the IGL amplification polymorphism, the C{lambda}2 region was analyzed by PCR and sequencing. The C{lambda}2amp regions of individuals with the IGL amplification polymorphism were also sequenced. For this purpose the PCR products generated with the IGLamp-F and IGLamp-R primers were sequenced with those generated with the C{lambda}2-F and C{lambda}2-Rseq primers.

In two of the 134 analyzed P0/P0 cases (1.5%) a heterozygous peak of nucleotides A and G was observed in the codon encoding the serological marker Ke. This implies that these individuals are heterozygous for the Mcg-Ke+Oz- polymorphism. In the C{lambda}2amp region of the 44 individuals with an IGL amplification polymorphism we did not detect the Mcg-Ke+Oz- polymorphism, indicating that the two polymorphisms are not linked.


    Discussion
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
Two polymorphisms have been described in the human IGL locus. However, they have never been sequenced at the DNA level. The first polymorphism concerns an IGL amplification polymorphism of 5.4 kb of DNA in the C{lambda}2-C{lambda}3 region. The second polymorphism is the Mcg-Ke+Oz- isotype, which was only known from serological analyses of Bence-Jones proteins of multiple myeloma patients (11, 12, 13, 14). Due to the high homology with the Mcg-Ke-Oz- isotype, which is encoded by the J-C{lambda}2 region, it was proposed that the Mcg-Ke+Oz- polymorphism is encoded by a polymorphic J-C{lambda}2 region that differs from the normal J-C{lambda}2 region at a single nucleotide position. It has been speculated that the two polymorphisms might be linked in such a way that the C{lambda} region on the polymorphic amplification encodes the isotype Mcg-Ke+Oz- (8, 14).

In this study we were able to sequence the 5.4-kb IGL amplification polymorphism. The IGL amplification polymorphism shares a homology of >99% with the J-C{lambda}2 region. The first 2.5 kb of the amplification, containing the J{lambda} and C{lambda} gene segments, coincides with a 2.2-kb region, which is also highly homologous to a 2.2-kb region in the J-C{lambda}3 cluster (98% homology; Fig. 3GoB). Taub et al. (15) proposed in 1983 a mechanism for the generation of this IGL polymorphism. Based on SB data and restriction fragment analysis, they proposed unequal crossing over between two 8-kb EcoRI allelic fragments through homologous recombination between two large homologous repeats. Our sequence information of the polymorphic IGL amplification together with the germline sequence of the complete IGL locus show that the homologous regions are 5.4 kb apart in the germline (P0) situation. Therefore, we confirm that the amplification probably occurred during meiosis via unequal homologous recombination between the two 2.2-kb homologous J-C{lambda}2 and J-C{lambda}3 regions.

The C{lambda}2 and C{lambda}3 gene region might be susceptible to duplication, because of its high homology, but especially because of the two homologous J-C{lambda} regions of 2.2 kb. The maximum number of amplifications is three, which suggests that the region is indeed susceptible to duplication, but this phenomenon apparently has its limitations. The different amplification variants appeared to be exactly identical. No differences were observed in multiple amplifications on the same allele, which suggests that during evolution the various amplifications occurred simultaneously or shortly after each other.

The J-C{lambda} region of the polymorphic amplification appeared to have the highest homology with the J-C{lambda}2 region and contained all essential elements required for recombination and expression, i.e., a functional RSS, intact donor and acceptor splice-sites, as well as functional J{lambda} and C{lambda} gene regions. Since the amplified J-C{lambda}2 region does not encode the Mcg-Ke+Oz- isotype, we concluded that the human IGL locus has two separate polymorphisms.

As known from literature, the IGL amplification polymorphism is found up to three times per allele (15, 18). Our sequence analysis showed that this polymorphism concerns identical amplifications, implying that in cases with a P2 amplification the first amplified region does not differ from the second. Screening of healthy controls showed that the frequency of the IGL amplification was 28% in Caucasoid individuals and involved only one allele. In Chinese individuals the frequency was much higher (85%) and involved both alleles in the majority of cases.

As the polymorphic amplified regions contain functional J-C{lambda}2 regions, we investigated the effect of the total number of J-C{lambda} regions on the frequency of Ig{lambda}+ B lymphocytes by studying the distribution between Ig{kappa} and Ig{lambda} L chain expression (Ig{kappa}:Ig{lambda} ratio). The presence of additional functional J-C{lambda} gene regions resulted in decreased Ig{kappa}:Ig{lambda} ratios of blood B lymphocytes compared with individuals without the J-C{lambda}2 amplification. One additional J-C{lambda} gene region was sufficient to decrease the Ig{kappa}:Ig{lambda} ratio, suggesting that this effect is dominant and that the addition of extra J-C{lambda} gene regions has little effect on the Ig{kappa}:Ig{lambda} ratio.

The Ig{kappa}:Ig{lambda} ratio can be decreased by extra copies of J-C{lambda} regions as well as by a decrease in Ig{kappa} (IGK) gene copies. In a patient with a heterozygous de novo deletion of chromosome 2 region p11.2p13, including the IGK locus (2p12), the Ig{kappa}:Ig{lambda} ratio was strongly decreased to 0.7 (21). This decrease is stronger than that found in individuals with extra J-C{lambda} regions. This difference in effect on the Ig{kappa}:Ig{lambda} ratio can be explained by the fact that Ig L chain rearrangements take place in an ordered fashion, starting with rearrangements in the IGK locus, followed by IGL gene rearrangements, if no functional IGK rearrangement took place (20). If there is only one IGK allele, the chance of a functional rearrangement resulting in Ig{kappa} expression is ~50% reduced. Consequently, the rearrangement process will shift to the IGL locus in an earlier stage, which is in line with a reduction of the Ig{kappa}:Ig{lambda} ratio from 1.4 to 0.7. In contrast, there is a limited time period or a limited number of attempts for acquiring functional Ig gene rearrangements (22, 23). If the B cell is not able to generate an Ig molecule within that time frame or that number of attempts, the cell will die by apoptosis (22, 23). Finally, the presence of multiple functional J-C{lambda} regions also implies that consecutive IGL rearrangements with V{lambda}-J{lambda} replacements can occur on one allele.

The polymorphic Mcg-Ke+Oz- isotype is the second type of IGL polymorphism and was only known from serological analyses. Our sequencing data now show that this isotype is encoded by a polymorphic C{lambda}2 gene segment. The polymorphic C{lambda}2 region was detected in only two individuals, who were both heterozygous for this IGL polymorphism. The reported frequency of the Mcg-Ke+Oz- polymorphism in 70 multiple myeloma patients was 6% (13, 19, 24), which exceeds the frequency of 1.5% in the 134 analyzed individuals who did not carry the IGL amplification polymorphism. However, this difference is not statistically significant (by {chi}2 test, p > 0.05). No Mcg-Ke+Oz- polymorphism was detected in the J-C{lambda}2 amplification polymorphism of 44 individuals, but this might be due to the low number of analyzed cases. Nevertheless, the data obtained indicate that the J-C{lambda}2 amplification polymorphism and the C{lambda}2 polymorphism are independent. The two polymorphisms might theoretically be present in one individual, but the frequency of such an event will be low (<0.5%).

In conclusion, two separate polymorphisms in the human IGL locus exist: the IGL amplification polymorphism and the C{lambda}2 polymorphism, resulting in the Mcg-Ke+Oz- isotype. Both polymorphisms involve the C{lambda}2 region, but they are not linked, although they might theoretically both be present in one individual. The presence of the IGL amplification polymorphism results in the presence of extra functional J-C{lambda} regions, which appeared to decrease the Ig{kappa}:Ig{lambda} ratio of normal blood B lymphocytes.


    Acknowledgments
 
We thank Prof. Dr. R. Benner for his continuous support. We acknowledge Dr. Jeroen G. Noordzij for technical support and Tar van Os for making the figures.


    Footnotes
 
1 Address correspondence and reprint requests to Prof. Jacques J. M. van Dongen, Department of Immunology, Erasmus MC, University Medical Center Rotterdam, Dr. Molewaterplein 50, 3015 GE Rotterdam, The Netherlands. E-mail address: vandongen{at}immu.fgg.eur.nl Back

2 Abbreviations used in this paper: IGL, Ig{lambda}; IGK, Ig{kappa}; PB, peripheral blood; RSS, recombination signal sequence; SB, Southern blot. Back

Received for publication January 18, 2002. Accepted for publication May 1, 2002.


    References
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 

  1. Kawasaki, K., S. Minoshima, E. Nakato, K. Shibuya, A. Shintani, J. L. Schmeits, J. Wang, N. Shimizu. 1997. One-megabase sequence analysis of the human immunoglobulin {lambda} gene locus. Genome Res. 7:250.[Abstract/Free Full Text]
  2. Frippiat, J. P., S. C. Williams, I. M. Tomlinson, G. P. Cook, D. Cherif, D. Le Paslier, J. E. Collins, I. Dunham, G. Winter, M. P. Lefranc. 1995. Organization of the human immunoglobulin {lambda} light-chain locus on chromosome 22q11.2. Hum. Mol. Genet. 4:983.[Abstract/Free Full Text]
  3. Lefranc, M. P., N. Pallares, J. P. Frippiat. 1999. Allelic polymorphisms and RFLP in the human immunoglobulin {lambda} light chain locus. Hum. Genet. 104:361.[Medline]
  4. Lefranc, M. P., G. Lefranc. 2001. The Immunoglobulin FactsBook Academic Press, London.
  5. Pallares, N., J. P. Frippiat, V. Giudicelli, M. P. Lefranc. 1998. The human immunoglobulin {lambda} variable (IGLV) genes and joining (IGLJ) segments. Exp. Clin. Immunogenet. 15:8.[Medline]
  6. Farner, N. L., T. Dorner, P. E. Lipsky. 1999. Molecular mechanisms and selection influence the generation of the human V{lambda}J{lambda} repertoire. J. Immunol. 162:2137.[Abstract/Free Full Text]
  7. Vasicek, T. J., P. Leder. 1990. Structure and expression of the human immunoglobulin {lambda} genes. J. Exp. Med. 172:609.[Abstract/Free Full Text]
  8. Jr Bauer, T. R., B. Blomberg. 1991. The human {lambda} L chain Ig locus: recharacterization of JC{lambda}6 and identification of a functional JC{lambda}7. J. Immunol. 146:2813.[Abstract]
  9. Hesse, J. E., M. R. Lieber, K. Mizuuchi, M. Gellert. 1989. V(D)J recombination: a functional definition of the joining signals. Genes Dev. 3:1053.[Abstract/Free Full Text]
  10. Stiernholm, N. B., L. K. Verkoczy, N. L. Berinstein. 1995. Rearrangement and expression of the human {psi}C{lambda}6 gene segment results in a surface Ig receptor with a truncated light chain constant region. J. Immunol. 154:4583.[Abstract]
  11. Frangione, B., T. Moloshok, F. Prelli, A. Solomon. 1985. Human {lambda} light-chain constant region gene CMor{lambda}: the primary structure of {lambda}VI Bence Jones protein Mor. Proc. Natl. Acad. Sci. USA 82:3415.[Abstract/Free Full Text]
  12. Hieter, P. A., G. F. Hollis, S. J. Korsmeyer, T. A. Waldmann, P. Leder. 1981. Clustered arrangement of immunoglobulin {lambda} constant region genes in man. Nature 294:536.[Medline]
  13. Walker, M. R., A. Solomon, D. T. Weiss, H. F. Deutsch, R. Jefferis. 1988. Immunogenic and antigenic epitopes of Ig. XXV. Monoclonal antibodies that differentiate the Mcg+/Mcg- and Oz+/Oz- C region isotypes of human {lambda} L chains. J. Immunol. 140:1600.[Abstract]
  14. Niewold, T. A., C. L. Murphy, D. T. Weiss, A. Solomon. 1996. Characterization of a light chain product of the human JC{lambda}7 gene complex. J. Immunol. 157:4474.[Abstract]
  15. Taub, R. A., G. F. Hollis, P. A. Hieter, S. Korsmeyer, T. A. Waldmann, P. Leder. 1983. Variable amplification of immunoglobulin {lambda} light-chain genes in human populations. Nature 304:172.[Medline]
  16. Ghanem, N., P. Dariavach, M. Bensmana, J. Chibani, G. Lefranc, M. P. Lefranc. 1988. Polymorphism of immunoglobulin {lambda} constant region genes in populations from France, Lebanon and Tunisia. Exp. Clin. Immunogenet. 5:186.[Medline]
  17. Kay, P. H., J. Moriuchi, P. J. Ma, E. Saueracker. 1992. An unusual allelic form of the immunoglobulin {lambda} constant region genes in the Japanese. Immunogenetics 35:341.[Medline]
  18. Van Dongen, J. J. M., I. L. M. Wolvers-Tettero. 1991. Analysis of immunoglobulin and T cell receptor genes. I. Basic and technical aspects. Clin. Chim. Acta 198:1.[Medline]
  19. Tümkaya, T., M. Van der Burg, R. Garcia Sanz, M. Gonzalez Diaz, A. W. Langerak, J. F. San Miguel, J. J. M. Van Dongen. 2001. Immunoglobulin {lambda} isotype rearrangements in B cell malignancies. Leukemia 15:121.[Medline]
  20. Van der Burg, M., T. Tümkaya, M. Boerma, S. De Bruin-Versteeg, A. W. Langerak, J. J. M. Van Dongen. 2001. Ordered recombination of immunoglobulin light chain genes occurs at the IGK locus but seems less strict at the IGL locus. Blood 97:1001.[Abstract/Free Full Text]
  21. Los, F. J., J. O. Van Hemel, H. J. J. Jacobs, S. L. S. Drop, J. J. M. Van Dongen. 1994. De novo deletion (2)(p11.2p13): clinical, cytogenetic, and immunological data. J. Med. Genet. 31:72.[Abstract]
  22. Nemazee, D.. 1998. Theoretical limits to massive receptor editing in immature B cells. Curr. Top. Microbiol. Immunol. 229:163.[Medline]
  23. Mehr, R., M. Shannon, S. Litwin. 1999. Models for antigen receptor gene rearrangement. I. Biased receptor editing in B cells: implications for allelic exclusion. J. Immunol. 163:1793.[Abstract/Free Full Text]
  24. Fett, F. W., H. F. Deutsch. 1975. A new {lambda}-chain gene. Immunochemistry 12:643.[Medline]



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