|
|
||||||||




*
Benaroya Research Institute, Virginia Mason Research Center, Seattle, WA 98101; and
R. H. Williams Laboratory and Molecular and Cellular Biology Program, and Departments of
Immunology and
Rheumatology, University of Washington School of Medicine, Seattle, WA 98101
| Abstract |
|---|
|
|
|---|
| Introduction |
|---|
|
|
|---|
The plasticity of TCR recognition of MHC-peptide ligands accommodates some structural variation, as seen in the setting of one MHC molecule presenting related peptides (3, 4, 5), a single peptide presented in the context of different MHC molecules (6, 7), or even in the recognition of unrelated peptide-MHC ligands (8, 9). In the setting of altered peptide ligands, amino acid substitutions in a peptide Ag have been shown to alter the character of the T cell response, leading to changes in the proliferation, cytotoxicity, and cytokine profiles induced upon TCR-peptide-MHC recognition. In some cases altered peptide ligands act through an alteration in the avidity of the TCR-peptide-MHC interaction, which translates into a change in the signal transmitted via the TCR and the subsequent response to activation (5, 10, 11). These findings and the observation that the TCR interacts directly with residues of the MHC (1, 2) suggest that TCR recognition of a peptide in the context of an alternative MHC molecule other than the cognate restriction element of the T cells may lead to an alteration in the T cell activation and response profile.
We now address this issue through the analysis of two systems: 1)
a system in which immature thymocytes have undergone positive selection
on one MHC class II molecule and their subsequent activation on
multiple class II molecules, and 2) a system in which we examine a
human T cell clone where TCR recognition of a peptide occurs in the
context of two class II molecules, DRB1*0401 and DRB1*0404. A setting
in which a T cell response to an altered MHC ligand (same peptide,
different MHC) that is intriguing is that of individuals who are
heterozygous for these two closely related class II alleles. Both
DRB1*0401 and DRB1*0404 are associated with an increased risk of
development of rheumatoid arthritis
(RA)3; however,
heterozygous individuals with this genotype have an amplification of
that risk and increased severity of disease (12, 13, 14).
These two HLA-DR4 molecules have very similar peptide-binding motifs
and differ from each other only in two amino acid polymorphisms in the
1 domain, including a disease-associated sequence known as the
shared epitope (SE) (15, 16).
In this study we provide evidence that T cells that respond to altered MHC ligands containing the SE can arise in a thymic reaggregation culture (RC) system. In this system thymocytes positively selected on DRB1*0401 can be activated by the structurally similar SE-containing DRB1*0404, but not the non-SE-containing DRB1*0402. We also demonstrate that cross-reactive T cells can be isolated from mature PBMC populations using MHC class II tetramers. We then show that the cytokine response of a hemagglutinin (HA) 307319-specific T cell clone from a DRB1*0401 homozygous individual can be skewed in response to an altered MHC ligand (DRB1*0404) containing the same peptide.
| Materials and Methods |
|---|
|
|
|---|
PA317 cells were infected from virus-secreting PE501 cells
transfected with a pLNCX vector (Clontech, Palo Alto, CA) containing a
bicistronic DNA element encoding the DRA1*0101 and DRB1*04 cDNAs
separated by an internal ribosome entry site (sequence from polio
virus). All cDNAs encoding the DRA1*0101, DRB1*0401, *0402, and *0404
MHC molecules were sequenced in the pLNCX vector. PA317 cells
expressing the MHC genes were cloned and used to infect actively
dividing ANV41.2 thymic epithelial cells and also mouse A20 cells (ATCC
TIB208; American Type Culture Collection, Manassas, VA). Retrovirally
infected cells were selected with 1 mg/ml G-418 (Life Technologies,
Gaithersburg, MD), and surface expression was checked using
FITC-labeled anti-DR L243 Ab. RCs were performed using a modified
technique developed by Jenkinson and Owens (17, 18).
I-A
o/o
2mo/o mice were obtained
from Taconic Farms (Germantown, NY). Thymi from 1- to 3-wk-old mice
were dissociated into single-cell suspension with Blendzyme 3 (Life
Technologies) following the manufacturers instructions.
CD4+CD8+TCRlow
thymocytes were mixed with MHC expressing ANV41.2 cells at a ratio of
25:1 (25 x 106 thymocytes/RC). The cell
mixture was spun down in microfuge tubes at 300 x g
for 6 min, followed by medium aspiration. The resulting cell slurry was
pipetted onto a 0.65-µm pore size filter (DVPP 01300; Millipore,
Bedford, MA) lying atop gelfoam sponges (Pharmacia-Upjohn, Kalamazoo,
MI) in six-well tissue culture plates containing 6 ml of RPMI 10 medium
(Life Technologies; RPMI 1640, no HEPES), 10% serum (50% FBS/BCS),
penicillin (100 U/ml), streptomycin (100 µg/ml), 1x nonessential
amino acids (Life Technologies), and 50 µM 2-ME. Plates were
incubated for 7 days in a 5% CO2 incubator at
37°C. On days 2 and 4 of the culture, 200 µl of murine IL-7
(Endogen, Woburn, MA) at 10 ng/ml was added. After 7 days RC were
gently dissociated using frosted slides, which left most of the stromal
tissue intact and facilitated separating stromal cells from the
thymocytes. One-fourth of the thymocyte suspension from each
reaggregate was incubated with 105
HLA-transfected mouse A20 cells in round-bottom wells of a 96-well
plate (150 µl of complete RPMI 10, total volume). Following overnight
culture (18 h) cells were stained with anti-CD4, -CD8, and -CD69
Abs and run on a FACSort or FACSCalibur flow cytometer (BD Biosciences,
San Jose, CA). Live cells were gated on using forward and side scatter.
We found that >99% of this population did not stain with the
viability indicator 7-amino actinomycin D (Sigma, St. Louis,
MO).
CD4-FITC (clone RM4-5), CD8a-CyChrome (clone 53-6.7), CD69-PE (clone H1.2F3), DR-FITC (clone G46-6, equivalent to L243), and TCR-CyChrome (clone H57-597) were obtained from BD PharMingen (San Diego, CA).
Tetramer identification of Ag-specific T cells
Soluble MHC molecules were loaded with peptides and tetramerized
as described previously (19). Briefly, cDNAs encoding the
extracellular portions of MHC
- and
-chains were ligated to
opposing leucine zipper regions. At the end of the
-chain cDNA is a
biotinylation sequence that allows site-specific biotinylation using
the Bir A enzyme (20). Soluble 
MHC molecules were
produced in insect cells and affinity purified using an anti-MHC
matrix. Following biotinylation, 
MHC molecules were incubated
with peptide for 3 days at 37°C. Multimeric units of MHC molecules
were prepared by 24-h room temperature incubation of the peptide-loaded
MHC complexes with PE-labeled streptavidin (BioSource International,
Camarillo, CA).
PBMC from a DRA1*0101/B1*0401 homozygous individual previously vaccinated for influenza virus were separated from heparinized venous blood by gradient centrifugation (Lymphoprep; Nycomed Pharma, Oslo, Norway.). Cells were cultured in RPMI 1640 (Life Technologies) supplemented with 2 mM L-glutamine, 1 mM sodium pyruvate, penicillin (100 U/ml), streptomycin (100 µg/ml), and 15% (v/v) pooled human serum. Adherent cells were prepared by plating PBMC at 5 x 106 cells/well in 24-well plates for 1 h. Nonadherent cells were removed using a transfer pipette. Adherent cells were incubated for 3 h with 10 µg/ml influenza HA307319. The nonadherent fraction was passed through a nylon wool column, added back to the adherent cells at a density of 2.5 x 106 cells/well, and cultured for 7 days.
DRA1*0101/B1*0401 and DRA1*0101/B1*0404 PE-labeled tetramers were constructed and loaded with HA307319 as previously described (19). On day 7 of culture, 5 x 105 cells were incubated with 0.5 µg PE-labeled tetramer in 50 µl of culture medium at 37°C for 12 h and then stained with anti-CD4-FITC (BD PharMingen) for 15 min on ice. Cells were washed and analyzed using a BD Bioscience FACSVantage flow cytometer. Cells that were positive for a particular tetramer were single-cell sorted into 96-well U-bottom plates. Sorted cells were expanded with 1.5 x 105 unmatched, irradiated (5000 rad) PBMC/well as feeders, with 2.5 µg/ml PHA and 10 U/ml IL-2 added 24 h later.
The specificity and DRB1*0401/DRB1*0404 cross-reactivity of T cell clones were examined by staining with DRA1*0101/B1*0401 and DRA1*0101/B1*0404 tetramers loaded with either the specific peptide, HA307319 (herein called DR0401-HA and DR0404-HA, respectively) or an irrelevant peptide, VP16465484 (VP16 is a tegument protein of HSV-2 virus).
T cell assays
PBMC (105) from DRB1*0401- or DRB1*0404-positive donors were incubated for 2 h with peptide, irradiated with 5000 rad, and then coincubated with 2 x 104 T cell clones in 96-well round-bottom plates. [3H]thymidine was added to the plates for the last 16 h, and plates were harvested at 72 h. For assays using plate-bound HLA class II monomers, 96-well flat-bottom, high binding plates (Costar, Cambridge, MA) were coated with class II monomers preloaded with the peptide of interest, incubated at 4°C overnight, washed with PBS, and blocked with medium containing 15% serum for 1 h. T cell clones (2 x 104) were then added to each well in 200 µl of medium containing 15% pooled human serum. Proliferation was measured at 48 or 72 h by addition of [3H]thymidine 16 h before cell harvesting. Media removed from wells at 24 or 48 h were used for examination of cytokine production.
Human IL-5 and IFN-
cytokine production were detected by use of a
standard sandwich ELISA method. Fifty microliters of supernatant was
added to wells precoated with a capture Ab (Endogen), and cytokine was
detected using a biotinylated anti-cytokine (IL-5 or IFN-
) mAb
(Endogen), followed by avidin-peroxidase and
o-phenylenediamine dihydrochloride. OD490 was
read using a microplate reader (Bio-Tek Instruments, Winooski,
VT). A standard calibration curve, in the range of 02 ng/ml, was also
performed for each assay using rIL-5 or rIFN-
(Endogen).
| Results |
|---|
|
|
|---|
RCs using the class II null thymic epithelial cell line (ANV41.2)
transfected with an MHC restriction element have been shown to allow
TCR transgenic thymocytes to differentiate into a mature phenotype
capable of Ag-specific proliferation (21, 22). To examine
how positive selection influences T cell cross-recognition of DR4 MHC
molecules, we have extended the use of the ANV41.2 cell line to examine
maturation of nontransgenic thymocytes into phenotypically mature T
cells (Fig. 1
). Thymocytes from
I-A
o/o
2mo/o mice lack murine
class I and II molecules and have arrested thymocyte maturation at the
CD4+/CD8+/TCRlow
stage. These thymocytes were coincubated with the ANV41.2 cell line
expressing one of the RA-associated human MHC class II molecules,
DRA1*0101/B1*0401 or DRA1*0101/B1*0404. As shown in Fig. 2
, A and B,
immature thymocytes from
I-A
o/o
2mo/o mice mature from a
CD4+/CD8+/CD69low
to
CD4+/CD8+/CD69high
to a
CD4+/CD8-/CD69low
phenotype over a 7-day period, with day 7 thymocytes having a mature
phenotype. This positive selection of
CD4+/CD8- T cells on day 7
is seen in 16.5 and 14.9% of the 7-day RC T cell population using
DRB1*0401- and DRB1*0404-transfected ANV41.2 cells, respectively, but
in only 2.6% of the vector-only-transfected ANV41.2 control cultures
(Fig. 2
C). An increase in TCR expression was also observed
between day 0 thymocytes and day 7
CD4+/CD8- cells (data not
shown).
|
|
|
In vivo, thymic selection establishes the peripheral T cell
repertoire, and the in vitro evidence presented above suggested that
circulating T cells from HLA DRB1*0401 individuals may demonstrate a
similar cross-recognition of HLA DRB1*0404. To study this we examined
the T cell response to the influenza peptide
HA307319 in a DRA1*0101/B1*0401 homozygous
individual. HA307319 is bound by both DRB1*0401
and DRB1*0404 (6, 23, 24) and is therefore a suitable Ag
with which to evaluate recognition in the context of DRB1*0401 and
DRB1*0404. PE-labeled HLA tetramers were constructed for both
DRB1*0401 and DRB1*0404 molecules. PBMC from a homozygous
DRA1*0101/DRB1*0401 individual previously vaccinated for influenza
virus were stained with CFSE before stimulation with
HA307319 peptide to allow identification of
cells proliferating in response to specific Ag stimulation. On day 7 of
culture, cells were harvested and stained with PE-labeled DR0401-HA or
DR0404-HA tetramers. As shown in Fig. 4
A, 3.7% of the cells
presented as tetramer positive and CFSElow upon
staining with the cognate DR0401-HA tetramer, consistent with
Ag-specific expansion of the
HA307319-responsive cells during the culture
period. Interestingly, staining with the DR0404-HA tetramer also
identified a small, but detectable, fraction of proliferating cells
(
0.1%), as shown in Fig. 4
B. This suggests that a
portion of the HA307319-specific T cells from
this DRB1*0401 individual were capable of allelic promiscuity.
|
|
DRB1*0404 can stimulate Ag-specific DRB1*0401-restricted T cells and alter the cytokine response
The two clones shown in Fig. 5
were further examined for their
response to activation with HA307319 in the
context of DRB1*0401 and DRB1*0404. T cell clones B2 (cloned using
DR0404-HA tetramers) and B16 (cloned using DR0401-HA tetramers) were
isolated from the same DRB1*0401 homozygous individual, and both clones
bound DR0401-HA tetramer and demonstrated a proliferative response to
activation by peptide in the context of DRB1*0401 PBMC (Fig. 6
, A and B). Clone
B16 lacked staining with the DR0404-HA tetramer (Fig. 5
A)
and demonstrated a peptide-specific, DRB1*0401-restricted response with
significant production of IFN-
and IL-5 upon activation (Fig. 6
, B, D, and F). Relatively minimal
proliferation was elicited by DRB1*0404-restricted Ag presentation, and
only at the highest peptide concentration was some IFN-
production
noted. In contrast, the B2 clone was activated by HA in the context of
either DRB1*0401 or DRB1*0404, with the proliferative response and
production of IFN-
similar with both class II molecules (Fig. 6
, A and C). Moreover, the B2 clone produced IL-5
when activated in the context of DRB1*0404, but not with DRB1*0401
(Fig. 6
E).
|
|
In a heterozygous individual the ability of one MHC class II
molecule to modify the response of a T cell could potentially be
dependent on the relative quantity of class II peptide complex
available on the APC. In turn, this would be determined by the level of
class II expression; the ability of the Ag to be processed, bound as
peptide, and presented by the class II molecule at the cell surface;
and the relative predominance of one signal over the other. To address
this issue when both altered MHC and cognate MHC-peptide complexes are
present, we used the MHC monomeric stimulation assay system. In this
system class II monomers were preloaded with HA peptide, diluted, and
then added to a 96-well plate at varying concentrations and
combinations. In this assay the presence of DR0404-HA, even at low
concentration, leads to the production of IL-5 by clone B2 (Fig. 8
), consistent with a specific
bias toward IL-5 secretion elicited by altered MHC recognition. Changes
in the DR0401-HA concentration had no consistent effect on IL-5 levels.
Proliferation and IFN-
production were present at low monomer
concentrations, but decreased with higher concentrations in this assay.
This may be due to accelerated proliferation and cytokine secretion
followed by activation-induced cell death at these high concentrations
of MHC-monomer. We have observed this behavior in other
MHC-monomer-stimulated systems (our unpublished observations).
This finding suggests that the T cell response to the altered MHC
ligand (DRB1*0404-HA) persists when more than one type of MHC molecule
is present. The presence of both genotypes in a heterozygous individual
could lead to a fundamental alteration in the T cell response to an Ag
compared with that of an individual who expresses only DRB1*0401.
|
| Discussion |
|---|
|
|
|---|
510%.
However, because the ANV41.2 cell line does not express B7 molecules,
and thus lacks the ability to negatively select, our data represent the
results of positive selection only. As such, our estimate of the number
of cross-reactive T cells in the RC probably represents the high end of
what one might find in the peripheral T cell pool. However, such
cross-reactive T cells have been identified in the periphery by
ourselves and others. In this paper we use HLA tetramers to identify
such cross-reactive T cells and have used this technology to identify a
T cell clone that is differentially activated by its cognate and
altered self ligands.
The human T cell clone B2 responds to HA307319
in the context of DRB1*0401 with a Th1 phenotype characterized by
proliferation and production of IFN-
. However, when activated by
HA307319 in the context of the
closely related DRB1*0404, IL-5 is produced as well. This pattern of
cytokine production is consistent over a large range of peptide
concentrations and time points (data not shown) and occurs with APC
alone or class II monomers alone, with or without CD28
costimulation.
The ability of altered MHC class II monomers to activate the T cell
clone and modify the cytokine profile is reminiscent of the
interactions of the TCR-peptide-MHC complex that determines the outcome
of cytokine production, as has been described with altered peptide
ligands. Altered peptide ligands have been shown to function by
modifying the TCR signaling pathway (5, 27, 28, 29), in part
by changing the avidity of the TCR-peptide-MHC interaction due to
alterations in binding affinity of the TCR-peptide-MHC contacts
(30, 31, 32, 33, 34). Our finding of reduced tetramer staining with
the DR0404-HA tetramer supports the concept that a common underlying
mechanism for altered T cell function is altered TCR avidity to the
peptide-MHC complex (35). DRB1*0401 and DRB1*0404 differ
in only two amino acids: an arginine to lysine at position 71, and a
glycine to valine at position 86. Position 86 lies at the end of the
-chain
helix and forms part of the position P1 peptide binding
pocket. This alteration leads to lower affinity of the HA peptide to
DRB1*0404 relative to DRB1*0401 (24) and most likely
alters the stability of the trimolecular complex. Position 71 is
located approximately in the middle of the
helix on the
-chain
and interacts with both the bound peptide and the CDR3 regions of the
TCR (36). It has been suggested that the lysine to
arginine difference in
71 could directly alter the TCR affinity for
the complex by the addition of a key hydrogen bond interaction between
TCR and MHC (37). The persistence of IL-5 production in
clone B2 over a range of peptide concentrations suggests that the
altered cytokine response is not solely due to the reduced affinity of
the peptide to the MHC. We suggest that the altered cytokine response
is due to the reduced avidity of the TCR to the peptide-MHC resulting
from affinity changes between TCR and MHC contacts.
There are several potential immunologic consequences of altered self recognition by T cells in heterozygous individuals. Activation of the B2 clone with the combination of altered MHC and cognate MHC leads to persistence of the lower TCR-peptide-MHC affinity response. This is conceptually analogous to the phenomenon of T cell antagonism elicited by altered peptide ligands. In vivo, one could envision a T cell selected on one MHC molecule that, due to alterations in the APC, Ag concentration, or cytokine milieu, could become more favorable for activation in the context of the alternative class II molecule (altered MHC), leading to a deviant immune response. Although our studies were performed with HLA-DR4 alleles, presumably this may also occur with other structurally related class II molecules. However, this paradigm may be particularly apropos in individuals who are heterozygous for DRB1*0401/DRB1*0404, in that the susceptibility to RA is synergistically increased for those individuals carrying both DRB1*0401 and DRB1*0404. Moreover, RA patients carrying both these alleles exhibit a more severe and erosive form of RA, with a substantially poorer long-term prognosis (12, 13, 14, 38). Our findings raise the possibility that in these individuals the pathogenesis and progression of disease may be influenced by the altered MHC-peptide recognition and provide a basis for further studies to evaluate whether such a mechanism plays a role in these patients with RA.
| Acknowledgments |
|---|
| Footnotes |
|---|
2 Address correspondence and reprint requests to Dr. Jane Hoyt Buckner, Virginia Mason Research Center, 1201 Ninth Avenue, Seattle, WA 98101. E-mail address: jbuckner{at}vmresearch.org ![]()
3 Abbreviations used in this paper: RA, rheumatoid arthritis; SE, shared epitope; HA, hemagglutinin; RC, reaggregation culture. ![]()
Received for publication March 19, 2001. Accepted for publication July 17, 2001.
| References |
|---|
|
|
|---|

T-cell receptor, influenza HA peptide and MHC class II molecule, HLA-DR1. EMBO J. 19:5611.[Medline]
phosphorylation is not required for the induction of T cell antagonism by altered peptide ligands. J. Immunol. 163:599.
by T cells. Proc. Natl. Acad. Sci. USA 92:9510.This article has been cited by other articles:
![]() |
Y. Watanabe, T. Takahashi, A. Okajima, M. Shiokawa, N. Ishii, I. Katano, R. Ito, M. Ito, M. Minegishi, N. Minegishi, et al. The analysis of the functions of human B and T cells in humanized NOD/shi-scid/{gamma}cnull (NOG) mice (hu-HSC NOG mice) Int. Immunol., July 1, 2009; 21(7): 843 - 858. [Abstract] [Full Text] [PDF] |
||||
![]() |
N. A. Danke and W. W. Kwok HLA Class II-Restricted CD4+ T Cell Responses Directed Against Influenza Viral Antigens Postinfluenza Vaccination J. Immunol., September 15, 2003; 171(6): 3163 - 3169. [Abstract] [Full Text] [PDF] |
||||
![]() |
L. BenMohamed, G. Bertrand, C. D. McNamara, H. Gras-Masse, J. Hammer, S. L. Wechsler, and A. B. Nesburn Identification of Novel Immunodominant CD4+ Th1-Type T-Cell Peptide Epitopes from Herpes Simplex Virus Glycoprotein D That Confer Protective Immunity J. Virol., September 1, 2003; 77(17): 9463 - 9473. [Abstract] [Full Text] [PDF] |
||||
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| HOME | HELP | FEEDBACK | SUBSCRIPTIONS | ARCHIVE | SEARCH | TABLE OF CONTENTS |