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Department of Molecular and Cellular Biology, Harvard University, Cambridge, MA 02138
| Abstract |
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usage.
Ag presentation assays reveal consistent differences for
Ad- and Ed-restricted T cells. Indeed, the
mutation leads to decreased peptide capture by Ad
molecules, and in striking contrast causes enhanced peptide loading by
Ed molecules. Thus, DM requirements differ for class II
structural variants coexpressed under physiological conditions in the
intact animal. | Introduction |
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The highly conserved Ii chain coassembles with polymorphic class II subunits to prevent irreversible misfolding or aggregation and protect the nascent empty groove from association with molecular chaperones responsible for endoplasmic reticulum quality control. Subsequently, class II occupancy by diverse peptide ligand(s) requires displacement of class II-associated Ii chain-derived peptide (CLIP) sequences. Current models suggest that the nonconventional class II product DM acts inside endocytic compartment(s) to promote CLIP release in exchange for tightly bound peptide ligand(s) and to protect empty class II from functional inactivation during extended exposure to low pH. DM associations with class II/Ii chain-processing intermediates, CLIP complexes, and empty class II have all been described (7, 8, 9), but specific interactions responsible for DM function as a peptide editor remain a mystery.
The extensive polymorphism necessary to accommodate diverse peptides also influences the intrinsic stabilities of class II heterodimers and many important aspects of Ii chain and DM chaperone functions. Allelic diversity has a significant impact on Ii chain functions during subunit assembly (10), the kinetics and specificity of CLIP associations (11, 12, 13, 14, 15), and Ii chain degradation products (16, 17). In vitro experiments demonstrate allele-dependent DM associations with empty class II (9). Allele-specific DM requirements during class II Ag presentation have been described in transfected cells, but contradictory conclusions were reached by different labs (18, 19, 20, 21). It also seems likely that DM actions demonstrated via these complementation assays could be influenced by many additional experimental parameters, such as abnormal expression levels and functional contributions by recipient cell lines, making it difficult to assess the significance of these observations.
Current thinking about the class II pathway has been strongly influenced by studies of DM mutant mice (22, 23, 24). The loss of DM function disrupts conventional Ag presentation and causes complex defects with respect to selection of mature CD4+ T cells. The striking accumulation of Ab/CLIP complexes alongside severely reduced peptide-loading capabilities strongly argues DM activity is required to mediate CLIP release and promote occupancy by diverse peptides under physiological conditions in normal APCs. As judged by the gain of reactivity toward wild-type class II molecules, mature CD4+ T cells exclusively selected on Ab/CLIP complexes exhibit somewhat incomplete tolerance toward natural self-peptides (22, 23, 24). Considerable evidence suggests these animals express a semidiverse TCR repertoire (25, 26, 27, 28).
As for Ii chain contributions (29), the extent of DM
requirements with respect to CD4+ T cell
maturation might be dependent on the particular epitope and/or TCR
specificity. Interestingly, discrete disturbances were recently
described for offspring of DM mutants crossed to class II transgenic
mice (30). Thus, Ek but not
Ak coexpression led to rescue of
CD4+ T cell development. However, complementation
using this particular allelic combination also allows formation of
haplotype-mismatched dimers, and thus decreases expression of
particular 
pairs, adding a degree of complexity with respect to
functional comparisons and self-tolerance issues. In addition, because
DM mutants have not as yet been extensively backcrossed to establish
congenic strains, random segregation of endogenous mouse mammary tumor
virus (MMTV)-encoded superantigens potentially causes selective V
deletions, and may therefore also affect the outcome of these
experiments.
To further evaluate possible effects of allelic diversity on DM activities during presentation of self peptides and TCR repertoire selection, we sought to generate loss of function DM mutants expressing different MHC haplotypes. Production of such animals is impractical by conventional genetic approaches due to the tight linkage of these loci within the MHC. However, this can readily be accomplished via embryonic stem (ES) cell technology. To this end, a targeting vector comprised of homologous genomic fragments isolated by long-range PCR was introduced into germline-competent BALB/c ES cells (31), and recombinant clones gave rise to genetically pure mutant progeny. In comparison with class II functional defects previously described for DM-deficient mouse strains, BALB/c DM mutants exhibit a less severely compromised phenotype. Remarkably, the loss of DM disrupts Ad Ag presentation and enhances peptide loading by Ed molecules. These experiments demonstrate for the first time that DM requirements differ for class II structural variants coexpressed under physiological conditions.
| Materials and Methods |
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To isolate BALB/c genomic subclones, we used a long-range PCR
system (Boehringer Mannheim, Indianapolis, IN; catalogue 1681 834) and
appropriate primer pairs derived from conserved regions shared between
129 and BALB/c sequences (32). As shown in Fig. 1
a, the 5' arm corresponds to a 4.5-kb
BamHI-ScaI fragment located immediately 5' to
exon 1. The 3' arm is comprised of a
HindIII-EcoRI fragment that contains 30 nt of
exon 2 and extends 4 kb downstream. The amplification products were
ligated into the pCR2.1 vector using the TA cloning kit (Invitrogen,
San Diego, CA; catalogue K2000-40). The
XhoI-HindIII fragment from pMCIneo was subcloned
into the corresponding sites of pBluescript KS, and an oligonucleotide
containing a ScaI site was subsequently introduced into this
intermediate via its KpnI and XhoI sites. The
BamHI-ScaI-digested blunt-ended 5' arm was
subsequently cloned into the SmaI site. The
HindIII-EcoRI-digested blunt-ended 3' arm was
introduced into the NcoI site present on a second plasmid
comprised of the 1.7-kb HindIII-XhoI
HSV/thymidine kinase counterselection cassette inserted into the
corresponding sites of pBluescript KS. The intermediate subclones
containing the 5' and 3' arms were subsequently modified to destroy
KpnI and HindIII sites, respectively, and
ultimately joined to create the isogenic targeting vector shown in Fig. 1
a.
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Animals
To generate chimeras, correctly targeted ES cell clones were
injected into C57BL/6 blastocysts. Proven germline chimeric males were
crossed to BALB/cJ females to produce genetically pure heterozygous
progeny that were subsequently intercrossed to obtain homozygous
mutants. To distinguish wild-type and BALB/c DMa mutant alleles, we
used a PCR screen. As shown in Fig. 1
, the common primer
(5'-TCTGGACACTGGGATTTGACCTTC-3') lying at the 3' end of exon 2, in
combination with a second primer upstream
(5'-CACATTCCGGCACACTCTATTCTG-3') in a portion of the gene deleted by
the targeting event, yields a 246-bp wild-type band. Additionally, a
third primer (5'-CTTCGCCCAATAGCAGCCAGTCC-3') specific for the neo
cassette in the targeting vector gives rise to the 691-bp mutant
product. Reactions were conducted for 30 s at 94°C, 30 s at
59°C, and 45 s at 72°C for 30 cycles, with a final extension
for 10 min at 72°C. The amplification products were resolved on a 2%
agarose gel and visualized by ethidium bromide staining.
The DMa-deficient mice (22), on a (129 x C57BL/6)F2 background, that express the H-2b haplotype, have been maintained by brother-sister matings. The production of Ii chain mutants (33), and sublines established by backcrossing the targeted allele onto BALB/cAn (H-2d), or B.C-9, a strain congenic with C57BL/6, but expressing the Igha allotype of BALB/c, has been described (10, 34). BALB/cJ and DBA/2J mice were purchased from The Jackson Laboratory (Bar Harbor, ME).
RNase protection assay
For analysis of DMa transcripts, we subcloned the 335-bp
EcoRI-HindIII fragment spanning exons 1 and 2
from the cDNA (35), kindly provided by John Monaco (Howard
Hughes Medical Institute, University of Cincinnati, Cincinnati,
OH) into corresponding sites of pBluescript KS. The resultant
plasmid was linearized with BamHI and transcribed using T3
polymerase to generate a 404-nt antisense probe. A mouse
actin
probe was used as a control. Total RNA (10 µg) was hybridized
overnight at 45°C with 32P-labeled probes.
Samples were digested using RNase A (40 µg/ml) and RNase T1 (2
µg/ml) for 60 min at 37°C in the case of the DMa probe, or 10 min
at 25°C following incubation with the actin probe, treated with SDS
and proteinase K, extracted twice with phenol/chloroform, ethanol
precipitated, redissolved in buffer containing 80% formamide, and
analyzed by electrophoresis in a 6% polyacrylamide denaturing
gel.
Abs and peptides
Hybridomas include MKD6 specific for a private
A
d epitope, 25-9-17 specific for
A
b/d, BP107 specific for
A
b/d, M5/114 specific for A
+ E
, K24-199
specific for A
d, and 14-4-4 specific for
E
d. The class II chain specificities
(36, 37) and Ii chain influences affecting expression of
these conformational epitopes (10, 34) have been
extensively discussed. Rabbit antisera specific for determinants
located in the cytoplasmic tails of the
- and
-chains were
generously provided by Ronald N. Germain (National Institutes of
Health, Bethesda, MD). The OVA323339
(ISQAVHAAHAEINEAAGR), hemagglutinin126138
(HNTNGVTAACSHE), IgG2ab435451
(YFMYSKLRVQKSTWERG), bacteriophage
repressor cI peptide
P1226 (LEDARRLKAIYEKKK), SWM 129153
GAMNKALELFRKDIAAKYKELGYQG, the truncated variant of moth cytochrome
88103 previously described as DASP KKANELIAYLKQATK, the Ii chain
85101 KPVSQMRMATPLLMRPM peptides, and biotin-conjugated variants were
purchased from Quality Controlled Biochemicals (Hopkinton,
MA).
Immunofluorescence analysis
For single-color staining, spleen cell suspensions depleted of
erythrocytes by ammonium chloride-Tris treatment were incubated on ice
with saturating amounts of biotinylated Abs or toxic shock syndrome
toxin-1 (TSST-1; catalogue TT606-B; Toxin Technology, Sarasota, FL),
followed by FITC-labeled avidin D (catalogue A-2001; Vector
Laboratories, Burlington, CA). Fluorescence was analyzed using a
FACScan flow cytometer (Becton Dickinson, Mountain View, CA), and data
displayed as cell number vs log fluorescence. For T cell subset
analysis, suspensions of thymocytes, lymph node, or spleen cells were
incubated on ice with anti-CD8 FITC, anti-CD4 PE, and
biotinylated anti-TCR (PharMingen, San Diego, CA; catalogue 01044D,
01065B, and 01302D, respectively), followed by streptavidin Red 670
(Life Technologies, Gaithersburg, MD). CD4 vs CD8 dot plots are shown.
For analysis of V
usage, lymph node cells were incubated with
anti-CD8 FITC and anti-CD4 PE, as above, in combination with
biotinylated TCR mAbs from PharMingen, as follows: anti-V
3
(catalogue 01402C), V
5 (catalogue 01352C), V
6 (catalogue 01362C),
V
8 (catalogue 09952C), V
11 (catalogue 01372C), V
12 (catalogue
01682C).
Radiolabeling, immunoprecipitations, and Western blots
Biosynthetic labeling, immunoprecipitations, and SDS-PAGE were conducted as described (17). Briefly, spleen cells were washed with warm HBSS containing 2% FCS and antibiotics, and resuspended (2 x 107/ml) in warm methionine-free DMEM supplemented with 4 mM glutamine and 5% dialyzed FCS. After 1 h at 37°C, [35S]methionine was added (250 µCi/ml) for 40 min. The cells were subsequently resuspended in a 5-fold excess volume of warm DMEM containing 15% FCS and 10x excess cold methionine, incubated at 37°C for 4 h, harvested, and then washed twice with ice-cold PBS. The cell pellet was lysed in buffer containing 1% Nonidet P-40, 20 mM Tris-HCl (pH 7.5), 150 mM NaCl, 5 mM EDTA, 1 mM PMSF, and 10 µg/ml aprotinin. After incubation on ice for 15 min, extracts were cleared of nuclei and debris by centrifugation for 30 min at 15,000 rpm. Lysates were precleared once with rabbit anti-mouse IgG (H + L) Abs (Zymed, South San Francisco, CA), twice with rabbit anti-rat IgG (H + L) Abs (Zymed), and twice with protein A-agarose (Life Technologies) before the addition of specific Abs. Immunoprecipitates were washed three times with buffer containing 0.05 M Tris-HCl (pH 8), 0.45 M NaCl, 0.5% Nonidet P-40, 0.05% Na azide, and 1 µg/ml aprotinin, and then solubilized in Laemmli buffer containing 2% SDS and 2-ME by treatment either for 60 min at room temperature or by heating at 100°C for 10 min, as indicated in the figure legends. Samples were analyzed by SDS-PAGE, subsequently treated with EnHance (DuPont-NEN, Wilmington, DE), dried, and exposed to x-ray film.
For Western analysis, sample buffer was added to detergent extracts (2 x 107 cells/50 µl) prepared as above, and lysates were divided into equal portions, and one half boiled for 5 min before fractionation on 10% polyacrylamide gels. Proteins were transferred onto nitrocellulose membranes (catalogue BA83; Schleicher and Schuell, Dassel, Germany) for 2 h at 500 mA. Blots were rinsed in TBST and then air dried overnight. Subsequently, blots were incubated in TBST with 10% dry milk and 3% BSA and rinsed once before the addition of primary Abs diluted in TBST containing 3% BSA and 5% calf serum. Following a 60-min incubation, blots were extensively washed with TBST containing 0.1% BSA and preadsorbed HRP secondary Abs added in TBS-T containing 3% BSA for 30 min. Blots were washed with TBST and developed by chemiluminescence using ECL (catalogue RPN2106; Amersham, Arlington Heights, IL).
Ag presentation assays
The T cell hybridomas F1.2, 1H11.31, and 1E5.11 2G12.1, 2D7.12, 1F5.2, and 1F10.2 were generously given to us by Luciano Adorini (Roche Milano Ricerche, Milan, Italy). T cell clones AODH7.1, 3DT52.5.8, 3D054.8, DO11.10, 3D018.3, and 3D026.1 were kindly provided by Philippa Marrack (Howard Hughes Medical Institute, National Jewish Center, Denver, CO). 7B7.3 was from Malcolm Gefter (Massachusetts Institute of Technology, Cambridge, MA). The IgG2ab-specific hybrids C5-10 and C5-45 were produced in this lab.
IL-2 production was assessed by incubating T cells (5 x 104/well) with spleen cells (2 x 105/well) in 200 µl of complete RPMI 1640 supplemented with 15% FCS, 10% NCTC109, 100 U/ml penicillin, 100 µg/ml streptomycin, 1 mM sodium pyruvate, 15 mM HEPES (pH 7.2), 0.1 mM nonessential amino acids, 5 x 10-5 M 2-ME, 2 mM glutamine, and increasing concentrations of Ag. Supernatants were collected after 20 h and assayed for IL-2 content in a secondary culture with CTLL indicator cells in the presence of 50% primary supernatants. For mixed lymphocyte reactions, CD4+ T cells (4 x 105/well) positively selected using magnetically labeled microbeads (catalogue 492-01) and MACS separation columns (Miltenyi Biotec, Auburn, CA.) were cultured with increasing numbers of irradiated (3300 R) spleen cells for 72 h. The degree of proliferation was measured by a 16- to 18-h exposure to 1 µCi of [3H]thymidine. All results are expressed as mean cpm of triplicate cultures.
| Results |
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Distinct structural properties of MHC class II allelic variants
are known to influence disease susceptibility and immune protection,
but information about DM actions in vivo as yet comes from studies of
mutant mice expressing the H-2b haplotype. To
analyze DM contributions to class II activities in the context of the
H-2d haplotype, we decided to generate a novel
mutation at the DMa locus in germline-competent BALB/c ES cells
(31). Initial attempts to target the locus using a
nonisogenic 129-based vector yielded no recombinant clones, making it
necessary to design a completely homologous construct. Taking advantage
of available BALB/c genomic sequence information (32), and
long-range PCR technology, we obtained 5' and 3' regions of genomic
homology and placed these arms in between positive (neo) and negative
(HSV/thymidine kinase) drug selection cassettes. As shown in
Fig. 1
a, the desired
recombination event creates a 1.7-kb deletion spanning exon 1, intronic
sequences, and most of exon 2. From 1076 drug-resistant colonies, we
recovered four correctly targeted clones giving the expected patterns
on Southerns. Proven germline males derived from two independent clones
were crossed to BALB/cJ females to generate genetically pure
heterozygotes, and subsequent intercross matings yielded homozygous
mutants and wild-type littermates. Next we analyzed steady state levels
of mRNA using an RNase protection assay. As shown in Fig. 1
d, wild-type lymphoid tissues efficiently express DMa
transcripts, whereas in contrast RNA from homozygous mutants gave no
detectable signal. Results obtained with this 5' probe spanning the
deletion were confirmed using a 3' probe specific for exon 5 (data not
shown). Targeted disruption of the BALB/c locus thus results in the
absence of DMa gene expression.
Partially disrupted class II conformational maturation
Selective loss of class II conformational epitopes in human
somatic variants (38) and mice lacking DM function
(23, 24, 39) closely correlates with CLIP occupancy. In
contrast, considerable evidence suggests DM activities are nonessential
for conformational maturation of other class II allelic products, but
there are also contradictory results in the literature (18, 19, 20, 21, 30). To further evaluate allele-specific DM requirements under
physiological conditions, class II surface expression by BALB/c mutants
and control wild-type spleen cells was tested using a panel of mAbs. As
shown in Fig. 2
, MKD6
(A
d-specific), 25-9-17
(A
b/d-specific), K24-199
(A
d-specific), and 14-4-4
(E
d-specific) mAbs demonstrate mature properly
folded class II is efficiently exported to the cell surface.
Surprisingly, surface expression of BP107
(A
b/d-specific) epitopes was substantially
above background levels, in contrast to the complete loss of BP107
epitopes observed for H-2b DM mutants (23, 24, 39). Similarly, mature Ad produced by
DM mutants exhibits detectable TSST-1-binding capabilities (Fig. 2
f), whereas in contrast Ab/CLIP
complexes produced by H-2b mutants entirely lack
TSST-1 reactivity (data not shown). This diagnostic serological profile
was consistently observed for homozygous mutants independently derived
from two targeted BALB/c ES cell clones. Interestingly,
DM- Ii- double-mutant
splenocytes gain expression of BP107 epitope(s), coincident with the
loss of CLIP occupancy. It is possible that these structural changes
may in part reflect a poor fit of Met98 in the P9
pocket (15), but to our knowledge the precise residues
responsible for BP107 reactivity have not been mapped. The TSST-1
contact site(s) partially overlaps with the class II peptide groove
(40). These findings strongly suggest that the BALB/c
mutant allele permits limited occupancy by diverse self peptides
structurally similar to wild-type ligands.
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Ii chain mutant mice expressing the H-2b
haplotype contain 1020% of the normal numbers of mature
CD4+ T cells in the thymus and periphery
(33, 41). In contrast, relatively efficient
CD4+ maturation has been described in BALB/c Ii
chain mutant mice (34). To evaluate
CD4+ T cell selection in BALB/c DM-deficient
animals, we analyzed T cell subpopulations using three-color flow
cytometry. As shown in Fig. 3
a, mutant thymi contain
roughly one half the number of mature CD4+ T
cells. As for Ii chain mutants, BALB/c DM-deficient mice consistently
display near normal numbers of mature CD4+ T
cells in the periphery. The less severe CD4 maturation defect observed
in this study for BALB/c mutants does not simply reflect changes in
animal health status over time, because age-matched
H-2b DM mutants analyzed in the same experiments
consistently display a more striking phenotype. Thus, in the context of
the BALB/c background, peripheral expansion of
CD4+ T cells is efficiently mediated via
DM-independent pathways. In all likelihood, distinct self peptide
ligands are responsible for selection of CD4+ T
cells in Ii chain and DM mutants. Consistent with this possibility,
CD4+ T cell development is more severely
compromised in DM- Ii-
double mutants (Fig. 3
a).
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3,
5, 11, and 12. To evaluate DM-dependent reactivity toward endogenous
superantigens, we examined the percentages of T cells carrying these
V
segments, and as a control, V
6 and 8 representation was
analyzed in parallel. As shown in Fig. 3
3, 5, 11, and 12 were efficiently eliminated in
wild-type BALB/c mice. In contrast, these TCR V
segments are well
represented in Ii chain and DM mutants. Thus, we conclude DM plays
an essential role during presentation of endogenous superantigens.
The CD4+ T cells selected in DM mutants display
tolerance toward autologous stimulators, but parental wild-type cells
elicit vigorous proliferative responses (22, 23, 24).
Anti-self reactivity appears to be specific for diverse low abundance
self peptides encoded by unknown loci (25, 28). To further
evaluate DM contributions shaping the TCR repertoire, we similarly
examined the autoimmune status of residual CD4+ T
cells in genetically pure BALB/c mutants. As shown in Fig. 3
c, CD4+ T cells from BALB/c
DM-deficient mice consistently gave relatively weak proliferative
responses directed toward wild-type stimulators. As a third-party
control, we used B.C-9 (H-2b) spleen cells, a
congenic strain identical with C57BL/6 but expressing the
Igha allotype. Interestingly, the degree of
stimulation was markedly enhanced in the presence of
H-2d-compatible DBA/2J stimulators possibly due
to increased reactivity toward divergent self-peptides. Thus, residual
CD4+ T cells produced by BALB/c DM mutants seem
to display partial tolerance toward self-peptides naturally presented
via DM-independent pathways.
Absence of mature compact dimers coincident with appearance of SDS-unstable Ad/CLIP and Ed/CLIP complexes
To further examine class II structure, we performed
immunoprecipitation experiments. As expected, we found
Ab/CLIP migrates just slightly behind wild-type
compact dimers, and in heated samples, CLIP appears ahead of the dye
front. In contrast, Ad/CLIP and
Ed/CLIP complexes are unstable in SDS gels (Fig. 4
, a and b).
Surprisingly, in the case of Ed-associated CLIP,
we found evidence for structural heterogeneity because different Abs
yielded electrophoretically distinct CLIP species (Fig. 4
b).
Are unstable dimers detectable after a 4-h chase, loosely occupied by
CLIP and/or other mediocre peptides, displaced over time by mature
class II bound to tightly associated ligand(s)? To evaluate possibly
improved quality of class II peptides at steady state, we also examined
constitutive expression of compact dimers via Western blot analysis.
Under conditions appropriate for detection of
Ab/CLIP complexes, mature
Ad expressed by BALB/c DM mutants readily
dissociates in SDS-PAGE, consistent with findings reported for
Ad transformants (19, 20, 21). Results
obtained with M5/114 (A
+ E
-specific) mAb similarly demonstrate
SDS-unstable Ed molecules (Fig. 4
d).
Thus, the mutation disrupts selection of tightly bound
self-peptides.
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DM mutants carrying the H-2b haplotype
display severely compromised class II activities (22, 23, 24).
However, a complex picture has emerged with respect to DM and Ii chain
contributions during functional maturation of other class II allelic
variants. To further explore allele-specific DM and Ii chain
requirements under physiological conditions, mutant spleen cells were
tested for their abilities to stimulate a diverse panel of
Ad- and Ed-restricted T
cell hybridomas (Table I
). Unlike
DM-independent activity observed for transfected cell lines (19, 20), in this study we found presentation of intact protein Ags
to Ad-restricted T cell clones strictly requires
DM coexpression (Fig. 5
a). In
addition, DM leads to enhanced responses toward already processed
peptides (Fig. 5
b), whereas Ii chain contributions depend on
the particular epitope and/or TCR affinity. In striking contrast,
Ed-restricted T cell clones strictly require Ii
chain coexpression, and are partially independent of DM functional
activities (Fig. 5
c), consistent with recent evidence
suggesting that DM enhances presentation of the immunodominant
Ed-associated hen egg lysozyme 107116 epitope
(43). However, unlike fibroblasts transfected with class
II, Ii chain, and DM expression constructs, in this study we
found Ad- and Ed-restricted
T cells consistently exhibit distinct Ii chain and DM requirements,
suggestive of isotype-specific maturation pathway(s).
|
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2-microglobulin (
2m)
(44). Consistent with results above,
Ad-restricted T cells display enhanced responses
in the absence of Ii chain and a complete loss of functional activity
in the presence of DM-deficient splenocytes, and in contrast
Ed-restricted clones require Ii chain, but not DM
functions (Fig. 5
2m similarly display
isotype-specific Ii chain and DM requirements.
Experiments above demonstrate a subpopulation of mature
Ad expresses BP107 epitopes and TSST-1-binding
capabilities, consistent with detectable levels of CLIP release and
leaky peptide loading. To directly evaluate peptide-binding
capabilities, mutant and control wild-type splenocytes were incubated
with biotinylated peptides, stained with FITC avidin, and analyzed by
FACS, as described (45). As shown in Fig. 6
a, DM-deficient spleen cells
exhibit markedly reduced activities in the presence of both
hemagglutinin126138 and
OVA323339, known to be good
Ad binders, whereas Ii chain mutant splenocytes
display enhanced binding capabilities, as expected for empty class II
and/or molecules occupied by easily displaced ligand(s). Interestingly,
Ii 85101 gave similar results with H-2b
haplotype mice, but contrary to expectations, we found in the absence
of DM, BALB/c spleen cells bound exogenously added CLIP peptide with
increased efficiency (Fig. 6
a). DM mutant splenocytes
similarly display enhanced binding capabilities in the presence of
several Ed-specific peptides surpassing not only
wild-type, but also remarkably those observed for Ii chain mutant
splenocytes (Fig. 6
b). These experiments demonstrate
isotype-specific DM actions during peptide capture.
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| Discussion |
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- and
-chain
pairing and imposes allele-specific influences with respect to Ii chain
and DM associations. The Ab product displays
several exceptional properties. Other class II molecules readily
dissociate in SDS gels, whereas greater than 90% of mature
Ab migrates as compact dimers (46).
Similarly as a general rule, class II dimers efficiently assemble in
the absence of Ii chain, but Ab subunit
association strongly depends on Ii chain function (10).
Recent experiments demonstrate DM actions required for CLIP release and
Ab functional activities (22, 23, 24).
However, DM-independent class II Ag presentation has also been
extensively documented (18, 19, 20, 30). We wondered to what
extent these discordant observations truly reflect allelic differences,
and whether strict DM requirements might prove to be
Ab specific. To further investigate allele-specific DM actions during class II maturation, we created mutant mice carrying the H-2d haplotype via homologous recombination in BALB/c ES cells. Unlike gain of function experiments, this targeted mutagenesis approach has allowed us to examine functional consequences in a completely homologous system in professional APCs with appropriate ratios of class II, Ii chain, and the putative DM chaperone DO, all coexpressed under control of endogenous regulatory elements. This genetic background also offered the opportunity for side by side comparisons of Ad and Ed functional activities. Coexpression of structurally divergent class II surface Ags more closely approximates the situation in humans in which several homologous gene products are encoded by tightly linked loci. Several independent spontaneous mutations in mice selectively disrupt expression of the E subregion product, but interestingly strains with a reciprocal expression pattern (E subregion only) do not appear to exist. The null allele we engineered results in decreased peptide capture by Ad molecules, and in striking contrast causes enhanced peptide loading by Ed molecules. Thus, the functional role of DM differs for class II structural variants coexpressed in normal APCs.
Structurally diverse class II molecules display distinctive CLIP-binding properties in biochemical assays (11, 12, 13, 14, 15, 47, 48). In the case of CLIP bound to DR3, the highly conserved methionine side chains tightly fit inside the P1 and P9 pockets (1). A quite different situation exists with respect to the overall shape of the Ad peptide-binding groove (4). Although its P1 pocket appears large enough to accommodate a methionine, the P9 pocket is smaller, so Met98 is predicted to sit suboptimally. This relatively poor fit could potentially lead to enhanced spontaneous CLIP release and subsequent displacement by better binders. Possibly empty Ad survives well on its own in the absence of DM influences. In vitro studies have described empty class II conformers with distinct peptide-binding properties (49, 50), but we have as yet only vague ideas about the structure and fate of empty class II molecules inside normal APCs. As previously shown (33) and confirmed in this study, class II constitutively expressed by Ii chain mutants has superior peptide-loading capabilities, but it remains unclear whether these molecules are truly empty or occupied by easily displaced ligand(s) that permits properly folded class II to escape endoplasmic reticulum quality control. Recent evidence suggests empty class II molecules are selectively produced by immature dendritic cells (51), possibly due to down-regulated Ii chain expression (52, 53). Interestingly, allele-specific Ii chain requirements also appear to regulate dendritic cell functional activities (54). The extent to which allelic and isotypic differences influence intrinsic class II stabilities under physiological conditions has yet to be elucidated.
Another possible scenario is that allele- and isotype-specific contacts give rise to structural variants of CLIP with different dissociation kinetics. Sequence data reported for Ab- and Ad-associated peptides suggest this is not the case (47, 55). However, natural DM substrate(s) may well include additional portions of Ii chain extending outside the groove. Consistent with this way of thinking, it appears that the amino-terminal segment of CLIP destabilizes class II complexes (56, 57, 58), whereas C-terminal portions of Ii chain enhance class II associations (58, 59, 60). The relative importance of these additional Ii chain binding sites could perhaps differ for class II structural variants. Allele- and isotype-specific motifs also potentially influence the alignment of CLIP residues within the groove (14). Interestingly, Ek-associated CLIP produced by DM mutant spleen cells displays greater sequence diversity in comparison with Ab/CLIP (30). Similarly in this study, conformationally distinct CLIP products were recovered using different Ed-specific Abs. Sequence comparisons of these various class II-associated Ii chain proteolytic fragment(s) should help to provide a clearer understanding of Ii chain cleavage pathways.
Discrete Ad as opposed to
Ed peptide-binding preferences can be explained
in the simplest terms as being entirely due to selective binding motifs
inside the groove (2, 4). However, the present data
suggest additional complexities. Side by side comparisons analyzing
presentation of Ad- and
Ed-associated epitopes to a wide panel of T cell
clones demonstrate striking isotype differences with respect to Ii
chain and DM requirements. Thus, we found
Ad-restricted T cell clones strictly require DM
coexpression and only partially depend on Ii chain, whereas, in
contrast, Ed-restricted T cell clones require Ii
chain activities, but show relatively relaxed DM requirements.
Presentation of
2m epitopes with
Ed requires acidic pH and increased
concentrations, in comparison with binding properties of closely
overlapping Ad peptides (44).
Similarly at neutral pH, CLIP efficiently associates with
Ad molecules, and interactions with
Ed are greatly enhanced at mildly acidic pH
(47, 48). Consistent with these observations, the
structure of Ek reveals a network of hydrogen
bonds with a conserved water molecule and a buried cluster of acidic
residues in the binding groove, in all likelihood available only under
low pH conditions such as those inside endocytic vesicles
(2). Obviously, intact Ii chain efficiently forms
oligomeric complexes with Ed at neutral pH and
guides its post-endoplasmic reticulum export, possibly, as suggested
above, via isotype-specific contact site(s) outside the peptide-binding
cleft.
I-E molecules are known to associate with virally encoded
superantigens in a manner distinct from conventional peptide
ligands (34). Proteolytic processing of these type II
transmembrane glycoproteins is required for class II binding, and thus
engagement of specific TCR V
segments (61, 62).
Selective presentation with E but not A subregion products cannot
simply be explained due to preferential association per se because the
orf product binds equally well to A molecules (61). The
present experiments demonstrate for the first time that DM influences
presentation of MMTV-encoded superantigens. Additionally, we found that
Ed molecules expressed by DM mutants exhibit
markedly increased peptide-binding capabilities, even in comparison
with those produced by Ii chain-deficient spleen cells. These findings
suggest in the absence of DM-editing functions that
Ed molecules become stably occupied by mediocre
binders. According to this way of thinking, the self peptide repertoire
displayed by BALB/c DM mutants potentially includes novel low affinity
ligands such as those thought to provoke autoimmune disease.
Targeted mutagenesis aimed to cause loss of gene function may in some
cases also result in the accumulation of intermediates with distinctive
effects. A striking example comes from studies of class II mutant
strains in which null alleles introduced at either the
- or
-chain locus effectively disrupt class II surface expression, Ag
presentation abilities, and CD4+ T cell
maturation, but these strains display marked differences with respect
to B cell characteristics. Defective B cell development observed for
- but not
-chain mutants can best be explained due to selective
overproduction of
-chain aggregates (34, 39, 63).
According to current models, DM associates with various substrates,
including CLIP-occupied and empty class II molecules. Additionally, DM
activities may be down-regulated in selected cell types, due to the
formation of DM/DO complexes (64, 65, 66, 67, 68). Ii chain
associations also influence DM stability (69). The
recently solved structure of DM failed to reveal an open binding cleft
able to accommodate peptide ligand (70, 71). A mutagenesis
screen recently mapped DM interactions broadly to the lateral surface
of DR nearest P1 as opposed to the P9 pocket (72), but we
have as yet only rudimentary insights into specific contact site(s)
responsible for CLIP release, peptide editing, and DO associations. The
BALB/c DM mutant mice described in the present work may prove useful
for analysis of allele- and isotype-specific structural features
guiding class II peptide loading via these complex oligomeric
assemblies in specialized APCs.
| Acknowledgments |
|---|
| Footnotes |
|---|
2 Address correspondence and reprint requests to Dr. Elizabeth K. Bikoff, Department of Molecular and Cellular Biology, Harvard University, 16 Divinity Avenue, Cambridge, MA 02138. ![]()
3 Abbreviations used in this paper: Ii, invariant; CLIP, class II-associated Ii chain-derived peptide; ES, embryonic stem; MMTV, mouse mammary tumor virus; TSST-1, toxic shock syndrome toxin-1;
2m,
2-microglobulin. ![]()
Received for publication December 4, 2000. Accepted for publication February 12, 2001.
| References |
|---|
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2-microglobulin to class II-restricted T cells leads to self-tolerance. J. Immunol. 154:545.[Abstract]
chains. Immunity 11:515.[Medline]
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