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*
Department of Microbiology-Immunology, Northwestern University Medical School, Chicago, IL 60611;
Department of Microbiology and Molecular Genetics, University of California, Los Angeles, CA 90024; and
Department of Pathology, Emory University, Atlanta, GA 30322
| Abstract |
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| Introduction |
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Through elution studies, it has been shown that peptides associated with class II molecules generally range in length from about 1030 aa residues (3, 4, 5, 6). The recent determination of the crystal structures of human and mouse class II molecules complexed with peptides show that in contrast to class I, the peptide binding groove of class II is open at both ends, thus allowing for the binding of longer polypeptide chains (7, 8). T cell clones and hybridomas have been described that respond strongly to reduced and denatured protein Ag, even in the presence of enzymatic processing inhibitors or chemically fixed APC (9, 10, 11, 12). These studies provided the initial suggestion that unfolding may in many cases be sufficient for the binding of a protein sequence to class II molecules. Sette et al. (13) directly examined this possibility and determined that the reduced, but not the native, form of several proteins could bind to selective class II molecules. Jensen (14) has more recently described the capacity of various protein Ag to bind to class II molecules in the presence of a reducing agent at low pH. Thus, partial unfolding of a protein Ag, through reduction of disulfide bonds at low pH, is often sufficient for class II binding and subsequent T cell stimulation.
Interestingly, several investigators using a number of different Ag systems, have described T cells that appear to require native protein Ag or certain aspects of tertiary structure for stimulation (15, 16, 17, 18, 19). With the exception of fibrinogen (17), however, such studies were neither conducted in the presence of Ag processing inhibitors nor used chemically fixed APC. It is therefore uncertain whether the T cells used in these studies were, in fact, recognizing conformation-dependent regions of the proteins or peptide fragments. The possibility that intact, tightly folded, compact proteins can bind to class II molecules seems rather unlikely due to the structural constraints involved in MHC binding (7, 8), unless the particular epitope in question is localized to a conformationally flexible region of the protein (17, 20). However, the influence of protein or peptide folding via disulfide bonds on Ag processing and presentation to T cells has not fully been explored.
Previous studies using hen egg-white lysozyme (HEL)7 as a model Ag have determined that two sets of overlapping T cell epitopes are present within amino acid residues 4661 (21, 22) as well as 7496 (23, 24) for both high responder (I-Ak, I-Ek) and low responder (I-Ab) mice. Interestingly, three cysteine residues are located at positions 76, 80, and 94 within 7496. These residues are involved in forming the tertiary structure of HEL by disulfide bonding with other residues (7694 and 6480) in HEL (25). C57BL/6 mice immunized with native HEL in CFA generate strong T cell responses against HEL7490, but fail to respond to the overlapping HEL8196 region (24). However, this strain immunized with the partially unfolded peptide fragment encompassing residues 13105 responds strongly to HEL8196, but not to HEL7490 (24). Additionally, T cell hybridoma clones specific for the HEL8196 region respond poorly to native HEL, but very strongly to the protein with reduced and carboxymethylated cysteines (CM-HEL), as well as to HEL covalently modified by a diazonium salt (12). These results suggest that complete or partial unfolding of HEL is capable of enhancing the presentation of this epitope.
To further understand the nature of T cell recognition for such a modification, T cell reactivity to the epitopes at the site of modification has been investigated. In this study we demonstrate that T hybridoma clones specific for the HEL7490 epitope from low responder C57BL/6 (H-2b) and high responder C3H/HeJ (H-2k) mouse strains are completely unresponsive to covalently cysteine-modified CM-HEL, in sharp contrast to the T cells specific for the overlapping HEL8196 region. Subsequently, the potential role of the HEL tertiary structure conferred by double-cysteine residues within the T cell epitopes was further investigated using native HEL, CM-HEL, as well as the peptides with/without cysteine modifications. The ability of the epitope(s) to stimulate T cells is highly dependent on the reduced cysteine form. The failure of air-oxidized HEL7490 to bind class II or to stimulate T cell hybridomas supports the necessity of the reduction of disulfide bonds for presentation of these epitopes to T cells. The failure to respond to CM-HEL or CM-HEL7490 appears to be due to the modification of the cysteine residues that are critically involved in contacting MHC class II and/or the TCR. These results suggest that unfolding and reduction of this epitope are important prerequisites for T cell recognition of the HEL7490 epitope and provide a significant implication for peptide-based vaccine development.
| Materials and Methods |
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Inbred female C57BL/6 and C3H/HeJ mice (46 wk old) were purchased from Charles River Laboratories (Wilmington, MA) via the National Cancer Institute (Bethesda, MD). B10.A mice were purchased from The Jackson Laboratory (Bar Harbor, ME).
Antigens
Three times crystallized HEL was purchased from the Sigma (St. Louis, MO). Phosphorylcholine (PC) was covalently conjugated to HEL by diazonium linkage, as described previously (12, 21, 26). Synthetic peptides were prepared by the F-moc method (27) using the RaMPS system (DuPont, Wilmington, DE). Peptides used in this study included: HEL7488, NLCNIPCSALLSSDI; HEL4761, TDGSTDYGILQINSR; HEL8193, SALLSSDITASVN; and a non-HEL-derived viral (A1Bb) peptide, PADVTDQLIGYTPSL (28). Cysteine-methylated HEL (CM-HEL) and HEL7488 (CM-HEL7488) were prepared according to the method of Lee and Atassi (29). Briefly, HEL or peptide (7 µmol) was dissolved in 5 ml of 0.25 M triethylamine-acetate buffer containing 8 M urea and subsequently reduced with a final concentration of 1.3 M 2-ME. The reduced and unfolded HEL was precipitated, washed with ethanol/HCl (98/2, v/v), and then carboxymethylated by addition of iodoacetic acid (0.1 M) for 2 h. CM-HEL was recovered by precipitation in ethanol/HCl followed by extensive washing and dialysis against H2O to remove excess 2-ME, iodoacetic acid, and urea. These low m.w. compounds were removed from the CM-HEL7488 solution by ultrafiltration through Amicon-1000 membranes (Amicon, Beverly, MA), and the carboxymethylated peptide was then recovered by lyophilization. Oxidation of the peptide was accomplished by incubation of the sterile peptide solution at 37°C for 23 h followed by further storage at 4°C.
T cell hybridoma clones
T cell hybridoma clones used in this study included A2.5 specific for HEL8393/I-Ab (12), A69.5 specific for HEL7685/I-Ab (Y. S. Jang and B. S. Kim, unpublished observations), BO4H specific for HEL7490/I-Ab (24), PCH4.1 specific for HEL5160/I-Ab (26), AOIT2.11 (abbreviated AOIT) specific for HEL7482/I-Ak (30), and AO4H.H.9.1 (abbreviated AO4H) specific for HEL7382/I-Ak (31). Culture medium for maintenance and stimulation of the cell lines consisted of RPMI 1640 (Sigma) supplemented with 5% FCS and 5 x 10-5 M 2-ME.
Ag presentation assays
T hybridoma cells (1 x 105) were cultured in triplicate in flat-bottom 96-well microtiter plates (Costar, Cambridge, MA) for 24 h with various concentrations of Ag or PBS in the presence of 5 x 105 irradiated (3000 rad), syngeneic splenocytes as APC. T cell hybridoma stimulation was based on IL-2 production measured by the ability of the culture supernatants to support proliferation of the IL-2-dependent cell line, CTLL2 (32, 33). Briefly, 100 µl of supernatants were added to 7.5 x 103 CTLL2 cells in 100 µl of culture medium. After 24 h, wells were pulsed with [3H]TdR (1 µCi/well) and incubated for an additional 1418 h before harvesting. Levels of [3H]TdR uptake were determined by liquid scintillation counting. Data represent the maximum counts per minute, in which the background level of [3H]TdR uptake in cultures with PBS alone was subtracted from the level of proliferation to Ag (the mean counts per minute of triplicate cultures ± SE). For assays using the reducing agent, DTT, paraformaldehyde-fixed APC were incubated for 24 h at 37°C with Ag in the presence or the absence of 2 mM DTT (14). Preloaded APC were then washed and cultured with T hybridoma cells as described above.
Inhibition of Ag processing
Inhibition of Ag processing was conducted as previously described (12, 26) using leupeptin or NH4Cl (Sigma). Briefly, irradiated splenocytes (5 x 105/well) were incubated at 37°C with 01 mM leupeptin or 015 mM NH4Cl for 15 min before Ag exposure and then further incubated with T hybridoma cells (1 x 105) for an additional 24 h. Alternatively, APC (1 x 107 cells/ml) were fixed with 0.1% paraformaldehyde (Sigma) according to previously described methods (26). The fixation was terminated by addition of an excess of cold 0.5% glycyl glycine in PBS. The cells were then washed three times with PBS containing 10% FCS, and further incubated for 1 h at 37°C in RPMI 1640 culture medium. The fixed splenocytes (1 x 106 cells/well) were used as APC.
MHC class II binding assay
A functional competition assay was used to evaluate the relative class II binding ability of the CM-HEL7488 peptide (34). T hybridoma cells were cultured with live APC, as described above, in the presence of a suboptimal dose of stimulatory peptide (HEL7488) and various concentrations of competitor test peptides or PBS. Test peptides capable of binding to class II molecules can compete with the stimulatory peptide for binding and result in inhibition of the T cell response. Data are expressed as the percent inhibition of the response induced by HEL7488 as calculated by the following formula: [(cpm of PBS-treated control) - (cpm with inhibitor)/(cpm of PBS-treated control)] x 100.
Direct binding of MHC class II molecules with various peptides was assessed by the levels of competition of binding between isolated class II molecules and biotin-labeled, appropriate haplotype-reactive peptides using a capture ELISA with europium-labeled streptavidin as described previously (35). HEL4661 was used as a probe peptide for I-Ak-binding. Data points represent mean fluorescent counts per second.
| Results |
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To examine the structural requirements involved in generation of
the overlapping HEL7490 and
HEL8196 regions, we initially compared the
ability of T cell hybridomas specific for these regions to respond to
native HEL and chemically modified HEL. Both
I-Ab-restricted (A69.5 and BO4H) and
I-Ak-restricted (AOIT and AO4H) T hybridomas
specific for HEL7490 were completely
unresponsive to unfolded CM-HEL (Fig. 1
).
In addition, these hybridomas did not show an enhanced reactivity to
HEL following diazonium-linked hapten conjugation (PC-HEL; Fig. 1
).
Such a modification has resulted in more efficient generation of
HEL4661 and HEL8196 T
cell epitopes (12, 26). For example, a
HEL8196-specific T hybridoma (A2.5) was
stimulated very poorly by native HEL, but responded strongly to CM-HEL
and PC-HEL (Fig. 1
). Collectively, these results initially suggested
that unfolding enhances the generation of
HEL8196, while the overlapping
HEL7490 epitopes (recognized by A69.5, BO4H,
AOIT, and AO4H) are inhibited by this process. Thus, the failure
of HEL7490-specific T cells to respond to
CM-HEL may reflect the T cell recognition of a conformational epitope
that is destroyed in the unfolded derivative.
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To directly address the possibility that the conformation of Ag is
critical for T cell stimulation, the requirement for Ag processing was
examined. Conventional Ag processing inhibitors were used to determine
the processing requirements for the generation of
HEL7490 from native HEL. Leupeptin was used to
inhibit serine/cysteine proteases such as cathepsins, while ammonium
chloride was used as a general inhibitor of acidic proteases by raising
the intracellular pH of endosomal/lysosomal compartments
(36, 37, 38). Interestingly, the stimulation of
HEL7490-specific T cell hybridomas from both
MHC haplotypes was relatively resistant to leupeptin compared with the
stimulation of T hybridomas recognizing other regions of HEL, such as
PCH4.1 (21, 26), which is specific for
HEL5160 (Fig. 2
and data not shown). However, the generation of
HEL7490 was less affected by
NH4Cl treatment compared with that of
HEL5160 (Fig. 2
). Collectively, these results
suggest that generation of this HEL7490 epitope
region requires relatively low level of enzymatic processing.
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The failure of HEL7490-specific T cells to
respond to CM-HEL may actually be due to the direct modification of
cysteine residues at positions 76 and 80 rather than the inability to
respond to unfolded protein. To determine whether protein unfolding
without cysteine alkylation is able to stimulate the
HEL7490-specific T cells,
paraformaldehyde-fixed APC were pulsed with HEL or peptide in the
presence or the absence of the reducing agent, DTT, and subsequently
cultured with the T hybridomas. Interestingly, all the hybridomas
reactive to this region were responsive to only unfolded HEL, and
representative results are shown in Fig. 4
. However, such stimulation was rather
inefficient, as even 2- to 10-fold higher molar concentrations of
native HEL induced a much lower stimulation compared with DTT-reduced
peptide presented by the fixed APC or HEL presented by intact APC (Fig. 4
and data not shown). In addition, these hybridomas poorly recognized
air-oxidized HEL7488, and the stimulation was
markedly increased in the presence of DTT, suggesting that the
cystine(s) should be reduced even for the peptides to stimulate the T
cells (Fig. 4
). Unfixed APC have previously been shown to reduce
disulfide bonds (39), which is consistent with the ability
of unfixed APC to present oxidized peptide in the absence of added
reducing agent. A T cell hybridoma specific for a different HEL epitope
lacking cysteine was stimulated equally well by the peptide and fixed
APC in the presence or absence of DTT (data not shown). Thus, this
reducing reagent at the concentration used is not likely to confer a
nonspecific enhancement of T cell stimulation. Together, the cysteine
residues at positions 76 and/or 80 must be maintained in an unmodified
and reduced form to be recognized by MHC class II and/or the
epitope-specific TCR.
|
To determine whether internalization of Ag is necessary for
cystine reduction, APC were incubated for 6 h in the presence or
the absence of 0.1% sodium azide at pH 7.0 before incubation with
T cell hybridomas (Fig. 5
). To
prevent continuous internalization of Ag, aliquots of APC were fixed
with paraformaldehyde immediately after the 6-h incubation.
Internalization of oxidized HEL7488 and HEL
appears to be necessary for Ag presentation to T cells in the absence
of DTT, strongly suggesting that the reduction occurs intracellularly.
Similar results were observed at pH 5.0, although the levels of T cell
stimulation were lower, and this may be due to the inhibition of Ag
internalization at this pH (data not shown). In the presence of DTT, a
relatively low level of T cell stimulation was obtained by HEL, and a
high level was obtained by the oxidized peptide. In addition,
membrane-associated proteases may not be involved in the trimming of
HEL to facilitate the interaction between the reduced HEL and class II
molecules, because the level did not increase during the 6-h incubation
in the presence of sodium azide.
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To directly investigate the status of cysteine residues for TCR
recognition, the HEL7488 peptide was
carboxymethylated and tested for the ability to stimulate
I-Ak-restricted AOIT and
I-Ab-restricted A69.5 hybridomas (Fig. 7
A). Interestingly,
carboxymethylation of the peptide
(CM-HEL7488) completely abrogated the ability
of the peptide to stimulate either of the T cell hybridomas. These
results provide direct evidence that methylation of the cysteine
residues destroys the epitope function. Thus, the unmodified cysteine
residues are probably required for class II binding and/or TCR contact
in both the I-Ak- and
I-Ab-restricted responses to this region. The
CM-HEL7488 peptide was unable to inhibit the
HEL7488-induced response of AOIT, suggesting
poor binding of the peptide to I-Ak (Fig. 7
B). In contrast, this modified peptide appeared to interact
with I-Ab, based on the significant inhibition of
the HEL7488-induced response of A69.5 similar
to the level by a known I-Ab binding peptide,
HEL8193 (Fig. 7
B). This result
suggests that the lack of response by A69.5 to
CM-HEL7488 is due to the inability to interact
with the TCR. Therefore, the failure of
HEL7488-specific T cells to respond to CM-HEL
is probably due to the direct modification of the cysteine residues,
rather than to alteration of the tertiary structure of HEL.
|
To further correlate the binding and oxidation of cysteine
residues, the cysteine residues were conservatively substituted with
serine residues, and the levels of T cell activation by these peptides
were compared with that by oxidized peptide (Fig. 8
A). Substitutions of both
cysteine residues at position 76 and 80 drastically improved the
stimulation of I-Ab-restricted T cell hybridoma,
while such modifications completely abrogated stimulation of
I-Ak-restricted T cell hybridoma. The
I-Ak-dependent T cell stimulation with singly
substituted peptides indicates that the substitution of cysteine at
position 76, but not that at position 80 is responsible for the failure
of stimulation. Such substitutions also completely abolished the
I-Ak-restricted T cell activation by fixed APC in
the presence of DTT, but not that in
I-Ab-restricted T cell hybridomas (data not
shown). These results are consistent with the above data (Fig. 7
)
indicating that modification of the cysteine residue(s) abrogates
interaction with TCR of the I-Ak-restricted T
cell hybridomas.
|
| Discussion |
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Cysteine residues have either been substituted with similar serine
residues or carboxymethylated to avoid cross-linking of cysteine
residues via disulfide bonds. The failure of T cells to respond to
reduced and alkylated protein or peptide derivatives has previously
been taken as evidence for conformation-dependent epitopes
(15, 16, 17, 18, 19). However, many of the previous studies were not
conducted in the presence of processing inhibitors or fixed APC
(15, 16, 18, 19). In contrast to
HEL8196-specific T cells (12, 24),
those specific for the HEL7490 region are
strongly responsive to native HEL, but are unresponsive to the unfolded
CM-HEL (Fig. 1
). Thus, this result initially suggested that the T cell
recognition may be affected by protein conformation or modified
processing by carboxymethylation. Our additional studies with
HEL7490-specific T cell hybridomas revealed a
failure to respond to native HEL in the presence of fixed APC (Fig. 3
),
demonstrating that a certain degree of processing is required to
generate the epitope. In addition, Ametoni and Sercarz (unpublished
observations) have recently observed that
HEL7496 coupled by a disulfide bond at residue
80 with residue 64 of HEL6268 was unable to
stimulate T cells specific for
HEL8596/I-Ek. This result
confirms the possibility that complete reduction of disulfide bonds is
necessary for the recognition of a closely located epitope by TCR.
Furthermore, the failure of the T cells to respond to CM-HEL (Fig. 1
)
appears to be due to the methylation of cysteine residues, disrupting
the interactions with class II and/or the TCR (Fig. 7
). Consequently,
modification of these residues can influence T cell recognition due to
alteration of the contacting residues rather than the conformational
changes as previously thought in some cases. This is strongly supported
by the fact that serine substitution of the cysteine residue(s) also
inhibits the stimulation of certain
(I-Ak-restricted) hybridomas. Jensen
(39) has likewise described the importance of reduced
cysteine residues in class II contact using an insulin determinant that
had previously been suggested to be conformation dependent (15, 16).
The idea that the reduction of disulfide bonds at positions 76 and 80
is required to present the HEL7490 epitope was
further supported by the observation that fixed APC poorly present
oxidized peptide to the T cell hybridomas in the absence of added
reducing agent (Fig. 4
). Unfolding of HEL in the absence of additional
processing (fixed APC) was sufficient to stimulate low, but
significant, levels of both the I-Ab- and
I-Ak-restricted T cell hybridomas (Fig. 4
).
Others have also described the ability of unfolded Ag to bind to class
II molecules and stimulate T cells without additional processing
(13, 14), suggesting that unfolding alone is sufficient to
bind class II molecules and stimulate specific T cells. Through direct
binding studies, the reduced, but not native, forms of proteins,
including HEL, are able to bind to selected class II molecules
(13). Polypeptides capable of binding to class II
molecules may be very long (7, 8, 41), and additional
trimming of the polypeptides after class II binding may be required for
efficient stimulation of these T cell hybridomas (42).
Although such trimming could potentially occur through the actions of
proteases at the plasma membrane (43, 44), internalization
of the Ag appears to be necessary for additional processing (Fig. 5
) to
generate the particular epitopes within this region.
The failure of fixed APC to optimally present reduced HEL to these T
cell hybridomas suggests that supplemental processing is required in
addition to unfolding to efficiently generate the
HEL7490 epitope. However, only minimal
processing may be sufficient for generation of the determinant from
this region, because T cell hybridomas can be stimulated even in the
presence of intracellular processing inhibitors. (Fig. 2
). The
insensitivity to leupeptin suggests the lack of involvement of
serine/cysteine proteases in the generation of
HEL7490 (Fig. 2
). However, the sensitivity to
ammonium chloride is only marginal (Fig. 2
). Various compartments have
been suggested to contain reducing activity, including lysosomes
(45), endosomes (46), and Golgi vesicles
(47), indicating that such reducing activity may not
always require low pH. Furthermore, treatment with leupeptin or
ammonium chloride does not inhibit intracellular reduction of disulfide
bridges of a protein Ag (46). Also, the generation of
class II binding peptides upon unfolding has been shown to require low
pH for some, but not all, proteins (14, 39).
Interestingly, Jensen (14) demonstrated that
I-Ed can present
HEL106120 after unfolding of HEL at low pH, and
others have shown that generation of the
HEL4661 region requires transport of the
protein to the low pH environment of the lysosomes (45, 48).
The processing and structural requirements involved in the generation
of HEL7490 appear to be similar for both
I-Ab- and I-Ak-restricted T
cell hybridomas (Figs. 1
and 2
). Although this region has previously
been suggested to represent a predominant T cell determinant region
from native HEL in low responder C57BL/6 mice (24, 49), it
does not represent a predominant epitope in
I-Ak-bearing high responder mouse strains
(49, 50). Nevertheless, the region of
HEL7496 serves as a major source of epitopes
for both low responder as well as high responder mice. The
immunodominance in T cell epitope selection is probably determined not
only by class II binding affinities of individual peptides but also by
availability of the epitopes (51, 52, 53). Although reduction
itself is not sufficient for an optimal presentation of the epitopes
derived from native HEL (Fig. 4
), the generation of such epitopes may
be relatively simple and less constrained, as the reduction of the
molecules alone can provide a significant level of T cell stimulation.
Despite the simple requirement for Ag processing to generate epitopes
from this region, the kinetic study indicated that a prolonged time was
required for their generation, suggesting the reduction may occur in a
late endosome or lysosome (Fig. 6
). Interestingly, the
reduction/presentation of oxidized peptide was even slower than that of
the intact HEL molecule. This difference may reflect the differential
efficiency of the transport of the molecules, as a recent report
suggested a deficient transport of peptide by APC (54).
Taken together, our results indicate that the reduction of cysteine
residues of either intact protein or peptide is essential for efficient
T cell stimulation. Furthermore, modification of such cysteine residues
with either chemical modification or substitution with other
structurally similar residues may also alter the immunological
properties of the proteins and/or epitopes. Thus, particular
considerations should be given for cysteine residues in peptide-based
vaccine development.
| Footnotes |
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2 H.-K.K. and J.A.M. made equal contributions to this study. ![]()
3 Current address: Drug Delivery, Becton Dickinson Technologies, 21 Davis Drive, Research Triangle Park, NC 27709. ![]()
4 Current address: Ag Express, Inc., 1 Innovation Drive, Worcester, MA 01605-4306. ![]()
5 Current address: La Jolla Institute for Allergy and Immunology, San Diego, CA 92121. ![]()
6 Address correspondence and reprint requests to Dr. Byung S. Kim, Department of Microbiology-Immunology, Northwestern University Medical School, 303 East Chicago Avenue, Chicago, IL 60611. E-mail address: ![]()
7 Abbreviations used in this paper: HEL, hen egg-white lysozyme; CM-, carboxymethylated; PC, phosphorylcholine. ![]()
Received for publication August 31, 1999. Accepted for publication December 3, 1999.
| References |
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-chain does not require processing. J. Immunol. 140:1063.[Abstract]
d class II histocompatibility molecules. Mol. Immunol. 34:145.[Medline]
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