The Journal of Immunology, 1999, 163: 4663-4672.
Copyright © 1999 by The American Association of Immunologists
Paired Stat6 C-Terminal Transcription Activation Domains Required Both for Inhibition of an IFN-Responsive Promoter and Trans-Activation1
Shreevrat Goenka*,
Jeehee Youn*,
Linda M. Dzurek*,
Ulrike Schindler
,
Li-yuan Yu-Lee§,¶ and
Mark Boothby2,*,
Departments of
*
Microbiology and Immunology and
Medicine (Rheumatology), Vanderbilt University, Nashville, TN 37232;
Tularik, South San Francisco, CA 94080; and Departments of
§
Cell Biology and
¶
Medicine (Rheumatology), Baylor College of Medicine, Houston, TX 77030
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Abstract
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The cytokines IL-4 and IFN-
exert biologically antagonistic
effects that in part reflect opposing influences on gene transcription.
While the molecular mechanisms for IL-4-mediated transcription
activation have been extensively studied, little is known about
molecular mechanisms required for IL-4 inhibition of IFN-
signaling.
We have investigated IL-4 inhibition of the IFN-
-inducible promoter
for IFN regulatory factor-1 (IRF-1). In a cell line with low endogenous
Stat6, increasing levels of activated Stat6 at constant doses of
IFN-
and IL-4 leads to inhibition of the IRF-1 promoter. The
Stat1-dependent IFN-
activation sequence element of the IRF-1
promoter is a target for Stat6-mediated inhibition despite apparently
normal Stat1 DNA binding. However, our data are inconsistent with
competition between Stat1 and Stat6 for access to the IRF-1 IFN-
activation sequence or for an essential coactivator as a mechanism for
this Stat6-mediated inhibition. Instead, the data demonstrate that a
threshold of Stat6 transcription activation domains is required for
IL-4-dependent inhibition. The findings provide evidence of a novel
mechanism in which the Stat6 transcription activation domains play a
critical role in the IL-4-mediated inhibition of an IFN-
-inducible
promoter.
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Introduction
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Cytokines
exert crucial regulatory influences on immune responses and other
aspects of biological function (reviewed in Refs. 1, 2, 3, 4).
One role for these intercellular signaling molecules is to activate key
developmental events, typically through induction of gene
transcription. For example, IFN-
promotes the Th1 subset of effector
T cells in a process dependent on the IFN-
target gene IFN
regulatory factor 1
(IRF-1)3 as well as on
other transcription factors (1, 5, 6, 7, 8, 9). In addition to
these activating influences, normal biological regulation requires the
integration of a multiplicity of inter- and intracellular signaling
pathways. Thus, certain cytokines exert inhibitory influences on the
actions of other cytokines. For instance, IL-4 inhibits the development
of the Th1 subset of effector T cells (2, 5). Although,
the basis for these reciprocal effects of cytokines is unclear,
transcriptional antagonism between IL-4 and IFN-
has been amply
documented (Refs. 10, 11, 12, 13, 14, 15, 16 ; reviewed in Ref.
17). IL-4-induced expression of class II MHC and CD23 Ags,
as well as Ig class switching to the
H chain, are repressed by
IFN-
(10, 11, 12, 14, 18, 19). Similar transcriptional
antagonism is mediated by IL-4 against IFN-
. Thus, IL-4 inhibits the
induction of the IL-12Rß2 chain, IFN-
-induced high-affinity IgG
receptor (Fc
RI), and IFN-
-enhanced Ig class switching to the
C
2a H chain locus (13, 14, 15, 16, 17). Taken together, these
findings suggest the existence of mechanisms by which IL-4 inhibits
IFN-
-inducible genes.
Remarkably little is known about mechanisms by which one cytokine
inhibits another or about the integration of cytokine signaling
pathways such as IL-4 inhibition of IFN-
-induced transcription. In
contrast, a considerable amount of information has emerged on the
mechanisms by which cytokines activate gene transcription (3, 4, 20, 21, 22). IL-4 activates at least four distinct signaling
pathways, each of which has the potential to influence transcription
regulation. First, the Janus kinase (Jak)-Stat pathway is used by IL-4
for transcription activation (23, 24). IL-4 induces the
Jak-mediated tyrosine phosphorylation of latent Stat6, which then
dimerizes, translocates to the nucleus, and binds to specific DNA
sequences so as to activate gene transcription. Second, the
insulin-IL-4 receptor motif of IL-4 receptor
-chain (IL-4R
)
activates a signaling pathway via phosphorylated insulin receptor
substrate 1 and 2 (25, 26). These molecules signal a
proliferative response through the activation of the
phosphatidylinositol-3 kinase pathway and also may modulate
IL-4-induced transcription activity (25, 26, 27). A second
mechanism by which IL-4 can activate phosphatidylinositol-3 kinase is
through tyrosine phosphorylation of the protein tyrosine kinase c-Fes,
as c-Fes is tyrosine phosphorylated upon IL-4 engagement with its
cognate receptor (28, 29). Two additional molecules,
SH2 containing sequence (SHC) and IL-4 receptor interacting protein
(FRIP), associate with the insulin-IL-4 receptor motif of IL-4R
and
are thought to function as adaptors linking IL-4 signaling to the
Ras/mitogen-activated protein kinase pathway (30). It
is unclear which of these IL-4-activated pathways provides a basis for
the cross-regulation of IFN-activated genes. Similarly, IFN-
activation of Jak tyrosine kinases and the Stat1 protein play
central roles in IFN-induced gene transcription, but additional
signaling pathways are activated by IFN-
, perhaps accounting for the
inhibition of IFN-
by TGF-ß through a Jak-Stat-independent
mechanism (31).
To investigate the mechanism by which IL-4 inhibits IFN-
-induced
gene transcription, we have focussed on the promoter for IRF-1, a gene
whose induction by IFN-
is reported to be inhibited by IL-4
(32). On the basis of titration experiments with IFN-
and in vitro DNA binding studies, it has been proposed that this
IL-4-dependent inhibition is mediated by Stat6, and Stat6 competes for
the Stat1-dependent IFN-
-activated sequence (GAS) element of the
IRF-1 promoter. Using constant concentrations of IL-4 and IFN-
so as
to avoid potential changes in the activation other signaling pathways,
we present direct evidence that IL-4-induced inhibition of the IRF-1
promoter requires increasing levels of activated Stat6. Our data are
inconsistent with the previous proposal that competition for DNA
binding between Stat1 and Stat6 is the mechanism of inhibition. In
contrast, we have found that a threshold of paired Stat6 transcription
activation domains (TAD) needs to be recruited for IL-4 to exert an
inhibitory effect. Thus, these findings represent evidence of a novel
Stat6-mediated mechanism for IL-4 inhibition of IFN-
-inducible gene
expression.
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Materials and Methods
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Cell culture
HepG2 and 293T cells were cultured in DMEM supplemented with
10% heat-inactivated FBS, 50 U/ml penicillin, 50 µg/ml streptomycin,
3 mM glutamine, and 1x MEM nonessential amino acids (Life
Technologies) (DMEM/10F) at 37°C in a humidified
CO2 incubator. HepG2 variants stably
overexpressing Stat6 were isolated after transfection with linearized
Stat6-pcDNA3 (33) and selection in G418 (1 mg/ml) (Life
Technologies) containing DMEM/10F.
Generation of Stat6
C chimeric constructs
The Stat6
C-SD1, Stat6
C-SD2, Stat6
C-SD[1+1],
Stat6
C-SD[2+2] and Stat6
C-SD[1+2] expression constructs were
generated by subcloning PCR products corresponding to amino acids
661715 (domain 1) and 753810 (domain 2) of Stat6 into
Stat6
C-pcDNA3 (33). The inframe insertion of the PCR
products downstream of Stat6
C was confirmed by DNA sequencing.
Transient transfection and promoter assays
HepG2 cells (106/60 mm dish) were
transiently transfected using the SuperFect reagent (Qiagen,
Chatsworth, CA) according to the manufacturers protocol. Briefly,
DNA-SuperFect complexes were allowed to form in serum-free media for 10
min, then complete media was added to this transfection mixture and was
then used to transfect cells for 3 h. The indicated expression
constructs (08 µg), along with either the IRF-1-chloramphenicol
acetyltransferase (CAT) (34), the
(GAS)3-thymidine kinase (TK)-CAT
(35), pBLCAT2 (36), or CCAAT/enhancer binding
protein (C/EBP)-N4-TK-Luc (33) promoter-reporter chimeric
plasmid constructs (2 µg), were used for each transfection.
Expression vector DNAs (08 µg) were included so that the total DNA
in each transfection was the same. After transfection, the cells were
washed, incubated overnight in complete DMEM, then divided equally and
stimulated overnight with recombinant human IL-4, (10 ng/ml),
recombinant human IFN-
(Sigma, St. Louis, MO), (1 U/ml), or both
IL-4 and IFN-
as indicated. The cells were then harvested and lysed
by repeated freeze-thaw cycles in 0.1 M Tris, pH 7.5. For CAT assays
the resultant lysate was incubated at 56°C for 10 min, clarified by
centrifugation, and assayed using [3H]acetyl
CoA (0.05 µCi) and chloramphenicol (1 mM) in 0.1 M Tris-Cl, pH 7.5.
CAT activity was calculated by counting the tritiated
acetylchloramphenicol product soluble in the organic phase created by
an overlay of water-immiscible scintillation fluor (Econofluor-Packard,
Meriden, CT) and expressing these counts as a percent of the total
counts (39). For luciferase assays, the cell lysates were
mixed with luciferase assay substrate (Promega, Madison, WI) and
promoter activity was determined according to manufacturers
protocol.
EMSA
Mobility shift assays were performed on whole-cell and nuclear
extracts of HepG2 cells transfected with the indicated expression
plasmids. Cells were transfected using the SuperFect reagent as
described above, divided equally, and induced with IL-4 and IFN-
as
indicated. For whole-cell extracts, the cells were lysed at 4°C using
0.5% Nonidet P-40 in 0.01 M Tris-Cl, pH 7.4, supplemented with 150 mM
NaCl, 50 mM NaF, 1 mM DTT, 0.1 mM sodium-vanadate, 0.4 mM PMSF, 5
µg/ml aprotinin, and 1 µg/ml leupeptin, followed by pelleting
insoluble materials (27, 40). For nuclear extracts, cells
were lysed with 0.5% Nonidet P-40 in 0.01 M Tris-Cl, pH 7.4, the
nuclei were collected by centrifugation, and nuclear proteins were
extracted using 0.42 M NaCl in 0.01 M Tris-Cl, pH 7.4, supplemented
with 50 mM NaF, 1 mM DTT, 0.1 mM sodium-vanadate, 0.4 mM PMSF, 5
µg/ml aprotinin, and 1 µg/ml leupeptin (27, 40). DNA
binding reactions were performed using 5 µg of protein in 10-µl
reactions containing 1 µg poly(dI-dC) competitor and
32P-labeled oligonucleotide, essentially as
described (27, 37). The double-stranded oligonucleotide
probe contained the "N3" GAS from the IRF-1 promoter,
5'-CCTGATTTCCCCGAAATGAT (stat recognition
palindrome is underlined), and its complement (41).
DNA-protein complexes were resolved on a 4.5% nondenaturing
polyacrylamide gel in Tris-borate-EDTA buffer as described
(37). Competition experiments with unlabeled
oligonucleotides were performed by mixing nuclear extract with 10 ng of
the indicated unlabeled double-stranded oligonucleotide followed by
performance of mobility shift reactions as described above. The N4
binding site oligonucleotide,
5'-CAACTTCCCAAGAACAGA, is derived from the
mouse Ig H chain germline
promoter (37). To identify
DNA-protein complexes as Stat1 or Stat6 by "supershift" analyses,
nuclear extracts were incubated with 1 µg of Abs specific for Stat1
(Transduction Labs, Lexington, KY) or Stat6 (Santa Cruz Biotechnology,
Santa Cruz, CA) for 30 min at 4°C followed by addition of
radiolabeled IRF-1 GAS probe and nondenaturing gel electrophoresis.
Western blot analysis
HepG2 or 293T cells were transiently transfected with the
indicated Stat6 expression plasmids. After treatment with IL-4, nuclear
extracts were prepared as described above. Nuclear proteins (40 µg)
were resolved on SDS-PAGE and blotted onto nitrocellulose membranes.
These transferred proteins were detected using Abs against Stat6
(rabbit polyclonal against amino acids 280480 of Stat6) (Santa Cruz
Biotechnology) followed by anti-rabbit IgG conjugated with HRP, and
then visualized using enhanced chemiluminescence reagent (Amersham,
Arlington Heights, IL) (40).
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Results
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IL-4 inhibition of IRF-1 is dependent on Stat6 activation
Certain IFN-
-dependent responses are enhanced in IL-4-deficient
mice, and a number of specific target genes induced by IFN-
or other
stimuli have previously been shown to be subject to inhibition by IL-4
(13, 14, 15, 16, 42, 43, 44). The IRF-1 gene is IFN-
inducible,
involved in the differentiation of Th function, and has a
well-characterized promoter that mimics regulation of the endogenous
gene (36, 41, 45, 46, 47). Moreover, IL-4 inhibits the
induction of IRF-1 by IFN-
, a finding consistent with observations
using primary spleen cells (Ref. 32 , and S. Goenka and M.
Boothby, unpublished observations). Both IL-4 and IFN-
activate
multiple signaling pathways. Of these, the Stat pathway is demonstrated
to be important in transcription activation (21, 22), but
its role in transcription inhibition is not clear. To dissect the
molecular mechanism(s) by which IL-4 inhibits IFN-
-induced
transcription, it was necessary to identify an IL-4, IFN-
-responsive
cell line with relatively low levels of endogenous Stat6 so that Stat6
dose-response experiments could be performed at constant doses of IL-4
and IFN-
to maintain other signaling by these receptors
constant.
The HepG2 cell line is responsive to both IL-4 and IFN-
, yet offered
the advantage of low endogenous levels of Stat6 (33) and
modest levels of Stat1 (as assessed by mobility shift assays and by
virtue of a 4-fold increase in IFN-
inducibility in cells
transiently transfected with a Stat1
expression construct (S.
Goenka, unpublished observations)). Therefore, in transient
transfection experiments to determine the effect of Stat6 on the IRF-1
promoter independent of other IL-4-activated signaling pathways, the
level of Stat6 was varied with constant IL-4. A 1.7-kb IRF-1 promoter
linked to the CAT reporter gene (34) was transfected into
HepG2 cells along with increasing amounts of a Stat6 expression
construct, and the resultant CAT activity was determined after
stimulation with IL-4, IFN-
, and IL-4 with IFN-
. A 25-fold
induction of the IRF-1 promoter was observed in the presence of
IFN-
, and IL-4 treatment alone did not induce the promoter.
Cotransfection of increasing amounts of a wild-type Stat6 expression
vector had no effect on IFN-
induction of the IRF-1 promoter in the
absence of IL-4R
engagement. Moreover, IL-4 exerted no inhibitory
effect when Stat6 was present at the low endogenous levels
characteristic of HepG2 cells. In sharp contrast, IFN-
inducibility
of the IRF-1 promoter was progressively inhibited when these increasing
amounts of cotransfected Stat6 were activated by IL-4. IRF-1 promoter
induction was reduced to 0.25x control at the maximum level of
inhibition that could be achieved without toxicity to the transfected
cells (Fig. 1
). These data indicate that
activation of sufficient Stat6 is required for inhibition of the IRF-1
promoter at a constant concentration of IFN-
and IL-4. Taken
together, these findings indicate that a threshold of Stat6 is required
for it to mediate its inhibitory effect, as the endogenous level of
Stat6 in HepG2 cells is not sufficient to decrease the IFN-
inducibility of the IRF-1 promoter maximally.
Stat6 inhibition via the Stat1-binding GAS motif
To determine whether the Stat1 binding site in the IRF-1 promoter
is a target of Stat6-mediated inhibition, we performed similar
transient transfection experiments using a trimer of this Stat1 binding
site (also termed GAS) linked to the basal TK promoter in the construct
(GAS)3-TK-CAT (35). Cotransfection
of this construct into HepG2 cells along with increasing amounts of a
Stat6 expression construct led to Stat6 dose-dependent inhibition
of (GAS)3-TK-CAT induction by IFN-
, but only
when the Stat6 was activated by IL-4 (Fig. 2
). Due to high basal activity of the
(GAS)3-TK-CAT, the IFN-
inducibility was
5-fold over basal values for this promoter-reporter construct as
compared with 25x basal for the full-length IRF-1 promoter. In
contrast, the minimal TK promoter with no linked GAS was not IFN-
inducible, and no effect of activated Stat6 on this latter promoter was
observed (data not shown). Taken together, these findings indicate that
whereas Stat1 activated by IFN-
binds to the IRF-1 GAS to induce
transcription (34, 45, 46), a GAS element is a sufficient
target for Stat6-dependent inhibition by IL-4.
Normal nuclear induction of Stat1 DNA binding activity in
IL-4-treated cells
The above results indicate that IL-4 inhibition of IFN-
responsiveness can be mediated through a Stat1 binding site. (Assay of
a 1.7-kb IRF-1 promoter mutant lacking the GAS site detected no IFN
inducibility, so the effect of IL-4 on this mutant promoter could not
be determined.) One mechanism by which such inhibition could be
achieved in HepG2 cells would be through decreased Stat1 activation and
DNA binding. Therefore, we performed EMSA to determine whether IL-4
blockade of Stat1 DNA binding activated by IFN-
is the molecular
mechanism for inhibition of the IRF-1 promoter. To mimic the
transcription assays, nuclear extracts from cells transiently
transfected with the Stat6 expression construct and treated with IL-4,
IFN-
, or both IL-4 and IFN-
were analyzed in mobility shift
experiments using the GAS element of the IRF-1 promoter. No difference
in Stat1 DNA binding activity was observed when extracts from
IFN-
-induced cells were compared with those from portions of the
same population treated with IL-4 and IFN-
(Fig. 3
A). IFN-
-induced levels of
Stat1 were unaffected by IL-4 treatment even when transfection of
increasing amounts of the Stat6 expression construct led to higher
levels of nuclear Stat6 (data not shown). Consistent with published
results in a different cell line (32), these findings
indicate that IL-4 and Stat6 activation did not inhibit nuclear
translocation of Stat1 or its GAS DNA binding activity.

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FIGURE 3. Stat1 DNA binding in the presence of activated Stat6. HepG2 cells were
cotransfected with expression vectors for overexpression of Stat6
(pcDNA3-Stat6, 2.5 µg) (33 ), then stimulated as
indicated with IL-4 (10 ng/ml), IFN- (1 U/ml), or both.
A, Nuclear extracts prepared from these cells were
subjected to mobility shift analyses using a 32P-labeled
IRF-1 GAS probe (41 ). B, Where indicated,
Abs against Stat1 (1 µg) or Stat6 (1 µg), or unlabeled
double-stranded oligonucleotides (10 ng) containing the IRF-1 GAS or an
"N4" Stat binding site (SBS) from the Ig H chain germline
(G ) promoter, were added to the reactions. (Some preparations of
extracts generated a single Stat6 mobility shift band on initial assay
but, when reassayed after several months storage, later generated a
doublet (e.g., A vs B).)
C, Nuclear extracts from two independent
Stat6-overexpressing HepG2 clones were prepared after treatment with
cytokine as indicated and subjected to EMSA with the IRF-1 GAS
probe.
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Both Stat1 and Stat6 bind efficiently to the GAS binding site but
differ in their migration under nondenaturing conditions, such that
Stat1 migrates faster than Stat6 when complexed with DNA. Thus,
IL-4-treated cells generated increased levels of Stat6 DNA binding
activity whereas extracts from IFN-
-induced cells led to a Stat1
band (Fig. 3
A). The identity of these bands was confirmed by
using oligonucleotide competitions and through Ab supershifting (Fig. 3
B). Abs specific for Stat1 eliminated the IFN-
-induced
DNA-protein complex through formation of a supershifted band
comigrating with Stat6-DNA complexes (open circle). Similarly, Abs
specific for Stat6 eliminated the weaker Stat6 mobility shifts and
created a slower mobility band (closed circle). Consistent with these
findings, unlabeled IRF-1 GAS competed for formation of each of the
indicated complexes ("1" and "6"), whereas an oligonucleotide
with a 4-bp spacer between its dyad repeats competed for the
slower-migrating complexes (Stat6) but not for the Stat1 complex
because only Stat6 binds to such N4 binding sites (48).
Also consistent with these findings, we have observed that Stat1 DNA
binding activity was normal in HepG2 variants stably transfected with
Stat6 so as to express amounts of Stat6 DNA binding activity
20-fold
higher than the low endogenous level in HepG2 (Fig. 3
C), and
IL-4 inhibited the IRF-1 promoter in transfection experiments using
these subcloned variants (data not shown). It was conceivable that
these results were due to examination of cells that had only undergone
short-term stimulation. However, we observed in time-course experiments
that Stat1 activation wanes after several hours, consistent with
previous observations in other cell lines (49). Periods of
IL-4 pretreatment of up to 16 h led to a similar time-dependent
decay in Stat6 activity but did not affect Stat1 DNA binding activity
(data not shown). Therefore, no substantive decrease in Stat1
mobilization was apparent despite substantial inhibition of IRF-1
promoter activity. We conclude that when HepG2 cells are treated with
IL-4 in addition to IFN-
, IRF-1 promoter inhibition occurs under
conditions where Stat1 binding activity is normal.
Inhibition requires Stat6 TAD(s) of the C terminus
The ability of Stat6 both to bind to and exert an inhibitory
effect at the IRF-1 GAS suggested that IL-4 might inhibit the IRF-1
promoter because Stat1 and Stat6 compete for access to the same DNA
binding site. Consistent with this model, Stat6 inhibits
NF-
B-mediated induction of the E-selectin promoter due to overlap of
a Stat binding site and an NF-
B/Rel DNA element (50).
To investigate if this mechanism accounts for IL-4 inhibition of the
IRF-1 promoter, we compared the inhibitory potency of wild-type Stat6
with that of a Stat6 mutant (Stat6
C) that retains normal DNA binding
activity but lacks a TAD. Each of these expression constructs was
cotransfected into cells along with the full-length IRF-1 promoter CAT
construct. Although wild-type Stat6 inhibited IFN-
inducibility of
the IRF-1 promoter construct (Fig. 4
B), activated Stat6
C was
unable to mediate an inhibitory effect (Fig. 4
A). Similar
results were observed with the (GAS)3-TK-CAT
plasmid (data not shown). However, the Stat6
C construct directed
similar steady-state protein levels and binding activity specific for
the IRF-1 GAS compared with wild-type Stat6 under these conditions
(Fig. 5
). Moreover, in vitro competition
experiments using increasing concentrations of nonradiolabeled
oligonucleotide containing the IRF-1 GAS showed that the relative
affinities of Stat6 and Stat6
C for the IRF-1 GAS are similar (Fig. 5
C), consistent with previously published data using the
germline
Stat6 binding site (33). We conclude from
these data that although Stat6 can bind to the IRF-1 GAS in vitro and
has the potential to interfere with Stat1 access to this critical
cis-acting element, such a competition mechanism did not
account for the observed inhibition of the IRF-1 promoter by IL-4 in
HepG2 cells.
Paired C-terminal domains mediate transactivation and
Stat6-dependent inhibition
To dissect further the role of the Stat6 in inhibition of IFN-
inducibility by IL-4, we determined the role of the Stat6 TAD. We
identified two distinct TADs within the Stat6 C-terminal amino acids
using screening in yeast. Fragments of Stat6 spanning amino acid
residues 661715 (domain 1) and 753810 (domain 2) induced strong
GAL4-dependent lacZ reporter activity when fused with the GAL4 DNA
binding domain (data not shown). To investigate the IL-4-mediated
transcriptional activity of these two regions, we created translational
fusions of Stat6
C with one or two copies of each domain (Fig. 6
A). An additional chimera,
Stat6
C-SD[1+2], was created in which both domains were fused to
Stat6
C. Each of these constructs was cotransfected into HepG2 cells
along with reporter plasmid that consisted of a minimal TK promoter
linked to four copies of the Stat6 and C/EBP binding sites from the Ig
H chain germline
locus and luciferase (C/EBP-N4-TK-Luc) (Fig. 6
B). The transfectants were cultured with or without IL-4
followed by measurement of promoter activity. As previously reported,
synergism between the C/EBP and Stat6 binding sites allowed
transactivation by the low level of endogenous Stat6 (33).
Overexpression of wild-type Stat6 provided further
trans-activation, while Stat6
C served as a
trans-dominant inhibitor of the wild-type Stat6. In contrast
to their potent trans-activation at GAL4 binding sites, a
single copy of neither domain 1 nor 2 was able to restore significant
trans-activation function to Stat6
C; instead, these
proteins inhibited the function of endogenous wild-type Stat6. However,
almost complete recovery of wild-type Stat6-mediated transcription was
observed with Stat6
C when domains 1 and 2 were linked in
cis (Fig. 6
B). To test if this result implied a
requirement for functional cooperation of unique sequences in domain 1
and 2, we tested the transactivation function of Stat6
C constructs
with two copies of domain 1 or of domain 2. A pair of either domains 1
or 2 was able to restore wild-type transactivation function to
Stat6
C (Fig. 6
B). To test if each construct was expressed
and could be activated by IL-4 so as to enter the nucleus, nuclear
extracts of cells transfected with the various Stat6
C chimeric
constructs and treated with IL-4 were analyzed by Western blotting and
mobility shift assays (Fig. 7
,
A and B). These experiments detected Stat DNA
binding activity in cells transfected with the different Stat6
constructs and activated by IL-4 (Fig. 7
B). Taken together,
our data show that Stat6 transactivation is mediated by two distinct
domains. A single iteration of either domain was insufficient to
mediate Stat6-dependent transcription activation. In contrast, two
copies of any combination of two activation sequences were necessary
and sufficient for transactivation function.
To investigate if either of these two Stat6-derived TADs played a role
in inhibition of the IRF-1 promoter, IL-4-induced antagonism mediated
by full-length Stat6 was compared with that mediated by Stat6
C,
Stat6
C-SD1, Stat6
C-SD2, Stat6
C-SD[1+1], Stat6
C-SD[2+2],
or Stat6
C-SD[1+2]. Stat6
C failed to inhibit the IRF-1 promoter,
and the fusions with either domain 1 or domain 2 alone were unable to
inhibit the IRF-1 promoter (Fig. 7
C). In contrast, when the
two domains were linked in cis, or when either domain was
dimerized, the wild-type activity of Stat6 was nearly restored so that
transfection of the resultant molecule significantly decreased IRF-1
promoter induction (Fig. 7
C). Taken together, these
observations indicate that Stat6-mediated inhibition is not due to
simple competition with Stat1 for binding at the GAS element and also
confirm that the low level of endogenous Stat6 in HepG2 does not lead
to inhibition. Instead, a threshold level of paired Stat6 TADs plays a
critical role in the inhibitory process required for IL-4-induced
antagonism of this IFN-
-dependent promoter.
Inhibition mediated by transcriptional activity rather than
competition for a coactivator
The observed requirement for the transactivation domain of Stat6
to mediate its inhibitory effect suggests two distinct models. First,
TADs are known to interact with essential coactivators that play a
critical role in the integration of signaling pathways. Thus, Stat6
TADs might sequester limiting pools of a coactivator essential for
Stat1 function. In this regard, cAMP response element binding protein
(CREB) binding protein (CBP) is a nuclear coactivator essential for
Stat1 activation of target promoters (51, 52). Based on a
physical interaction between CBP and Stat6, it has been hypothesized
recently that Stat6 may compete with Stat1 for CBP to inhibit
IFN-
-induced expression of monokine induced by IFN-
(53). By analogous reasoning, Stat6 might mediate the
inhibitory effect of IL-4 by sequestration of CBP, thereby inhibiting
Stat1 activation of the IRF-1 GAS element. To test this model, we
investigated whether overexpression of CBP was able to reverse
Stat6-mediated inhibition of the IRF-1 promoter (Fig. 8
). To confirm that the reported
coactivation of Stat1 activity by CBP applies to a naturally occurring
promoter, we transiently transfected cells with the IRF-1-CAT
promoter-reporter construct and increasing amounts of a
hemagglutinin-tagged CBP expression construct (54). A
2-fold increase in IFN-
inducibility of the IRF-1 promoter was
observed when only endogenous Stat6 was present (Fig. 8
A).
In the same experiments, we cotransfected a Stat6 expression vector and
increasing amounts of CBP to determine whether CBP would reverse
Stat6-mediated inhibition of the IRF-1 promoter. In the absence of
IL-4, the CBP-mediated coactivation of IFN-
inducibility was
comparable in cells cotransfected with Stat6 to that obtained when only
endogenous Stat6 was present (Fig. 8
B). However, increasing
amounts of CBP were unable to reverse IL-4-induced inhibition of
IFN-
induction of the IRF-1 promoter when Stat6 was activated by
IL-4 (Fig. 8
B). The expression of CBP was confirmed by
immunoblot analysis using an anti-hemagglutinin Ab (Fig. 8
B). Moreover, CBP did not enhance inducibility of a
Stat6-dependent promoter (data not shown) These findings indicate that
CBP is not a sufficient target to explain the Stat6-mediated inhibition
of the IRF-1 promoter.
Apart from CBP, one could hypothesize that Stat6 inhibits the IRF-1
promoter via the GAS element by sequestering some other coactivator of
Stat1. Thus, a Stat6 DNA binding mutant with an intact TAD would be
expected to retain the ability to compete for coactivators.
Substitution of arginine 562 to leucine has been shown to generate a
mutant form of Stat6 that is expressed normally in HepG2 cells but
fails to bind DNA (33). Accordingly, wild-type Stat6 or
the Stat6 DNA binding mutant, Stat6R
L (33), were
cotransfected with the IRF-1-CAT construct. Cells transfected with
Stat6R
L and induced with IL-4 and IFN-
showed no inhibition of
IRF-1 promoter activity as compared with cells transfected with
wild-type Stat6 (Fig. 9
A). A
similar result was obtained (S. Goenka and M. Boothby, unpublished
observations) using a second DNA binding mutant, Stat6VVI
(33). To test the nuclear localization of Stat6R
L,
nuclear extracts from cells transfected with Stat6R
L and treated
with IL-4 were immunoblotted with a Stat6-specific Ab. These
experiments showed significant nuclear concentrations of the Stat6R
L
mutant protein, which has a normal C terminus containing both TADs 1
and 2 (Fig. 9
B). Taken together, these observations are
inconsistent with the models in which inhibition of IFN-
transcription activation is due to Stat6 competing for a coactivator
such as CBP.
The other model conforming with the requirement for a threshold of
Stat6 TAD recruitment to mediate an inhibitory effect is that IL-4
activates the transcription of an inhibitor of the Stat1 pathway. In
principle, experiments using the protein synthesis inhibitor
cycloheximide might permit one to test the hypothesis that Stat6
induces the transcription of an inhibitor. In practice, we have found
that the IRF-1 gene is de-repressed after cycloheximide treatment of
HepG2 cells, so that IRF-1 transcript levels after cycloheximide
equaled those induced by IFN-
(unpublished observations). This
de-repression of IRF-1 by cycloheximide precluded the use of protein
synthesis inhibition to test whether IL-4 induces new gene expression
so as to inhibit IFN-
. As one alternate means of testing this model,
a trans-dominant inhibitor of Stat6 was titrated against
repressive amounts of Stat6 in transfection experiments with the
IRF-1-CAT construct. Increasing amounts of Stat6
C attenuated the
Stat6-mediated inhibition of the IRF-1 promoter (Fig. 10
A), indicating that
Stat6
C can inhibit the Stat6-mediated trans-activation of
an inhibitor of the Stat1 pathway. If indeed IL-4 induces an inhibitor
of IRF-1 promoter activation by a Stat6-dependent mechanism, then
pretreatment of cells with IL-4 could decrease promoter activity at a
time point after Stat6 activation has ended. Therefore, HepG2 cells
were cotransfected with IRF-1-CAT and pcDNA3-Stat6, split, and
pretreated overnight with nothing (control cells) or with IL-4. Control
and IL-4 pretreated cells were then each split and further incubated
with nothing, IL-4, IFN-
, or both for an additional 24 h. These
experiments showed that IL-4 pretreatment decreased IRF-1 promoter
activation (Fig. 10
B). Thus, promoter activity induced in
IL-4 pretreated cells by IFN-
alone was similar to that in
cells that were not pretreated and were then exposed to both IFN-
and IL-4. Importantly, control experiments indicated that IL-4
induction of Stat6 DNA binding activity had ended at the time that
pretreated cells were split and restimulated with IFN-
(Fig. 10
C), and this inhibitory effect was not apparent in
measurements of the competence of IFN-
to induce Stat1 (Fig. 10
D; also cf. Ref. 32). Taken together, these
results provide evidence of a mechanism in which IL-4 induces the
transcription of a gene product that mediates inhibition of the IRF-1
promoter. In contrast, the data are inconsistent with Stat6 competition
for binding to GAS DNA in the IRF-1 promoter (Fig. 4
and 5
) and with
saturation of a limiting pool of coactivator protein such as CBP (Fig. 8
and 9
).
 |
Discussion
|
|---|
During differentiation and homeostasis, cells are exposed
concurrently to a plethora of molecules effecting intercellular
communication. Accordingly, it is important to understand the
mechanisms by which different signals are integrated. IL-4 frequently
antagonizes the actions of IFN-
, and this reciprocal antagonism
extends to transcription regulation (13, 14, 15, 16, 17). The
molecular mechanisms which account for IL-4 inhibition of the
transcriptional activity induced by IFN-
, and for the integration of
IFN-
- and IL-4-activated signaling pathways, are not well
understood. A number of signaling pathways are thought to play distinct
roles in IL-4-mediated responses, of which the Jak-Stat, insulin
receptor substrate 1/2, and mitogen-activated protein kinase pathways
have all been implicated in IL-4-mediated gene activation. The central
findings of this study are that 1) a threshold of Stat6 is required for
the IL-4-mediated inhibition of an IFN-
-responsive promoter, which
was analyzed using fixed concentrations of cytokine; 2) paired TADs of
Stat6 are essential for both the trans-activation function
and the inhibition mediated by Stat6; 3) our data are inconsistent with
previously hypothesized models of competition between Stat1 and Stat6
for either DNA binding or a coactivator as mechanisms for Stat6
mediated inhibition; however, 4) a requirement for paired TADs to
mediate inhibition, and additional evidence with a
trans-dominant inhibitor of Stat6, suggest that Stat6
activates the transcription of an inhibitor affecting the
Stat1-dependent induction of IRF-1.
The data provide direct evidence for the involvement of Stat
transcriptional activation in the integration of IL-4- and
IFN-
-activated signaling pathways and for a novel inhibitory
mechanism that involves the Stat6 TADs and has the potential to
influence any promoter dependent on an N3 Stat binding site for its
activation. Importantly, an additional level (threshold) of Stat6
C-terminal TADs was essential for inhibition, for which the endogenous
Stat6 pool in HepG2 was insufficient. Because the IRF-1 transcription
factor is essential for Th1 development, an attractive possibility is
that IL-4-activated Stat6 may inhibit IFN-
-induced IRF-1 gene
transcription and thus contribute to the regulated development of Th1
and Th2 subsets of effector T cells (5, 6, 7). The observed
increases in development of Th1 cells in Stat6-deficient mice, and
increased Th2 cells in IRF-1-deficient mice, support the importance of
this Stat6-mediated inhibition of IFN-
signaling (6, 7, 55, 56). Of note, IL-4 also inhibits the IL-12
(Stat4)-dependent induction of another cytokine receptor, IL-12Rß2,
thereby reinforcing the polarization of function during development of
Th subsets (16, 57).
While there are few data on IL-4 inhibition of IFN-
signaling, some
molecular mechanisms for negative regulation of Jak-Stat pathways or
inhibitory influences of a Stat protein have been proposed. Competition
between two transcription factors for the IRF-1 GAS represents a
hypothetical mechanism for Stat6-mediated inhibition of Stat1 function.
Stat6 has been implicated in the inhibition of TNF-
-stimulated,
NF-
B-dependent transactivation of the E-selectin gene. Thus, Stat6
competes with NF-
B for access to a region within the E-selectin
promoter containing overlapping Stat6 and NF-
B binding sites
(50). Stat proteins bind to similar palindromic DNA
(TTC-Nx-GAA) sequences with N2-N4 spacing. Thus,
although Stat6 exclusively is able to bind to an N4 site, it also binds
to the IRF-1 GAS, an N3 site at which Stat1 binding is essential for
promoter function (34, 41). This competition for DNA
binding between Stat1 and Stat6 led to the interpretation that it is
the mechanism for the observed inhibition of IFN-
by IL-4
(32). In sharp contrast with previous conclusions, results
with the Stat6 C-terminal deletion mutant Stat6
C demonstrate that a
form of Stat6 equally able to compete for binding to the IRF-1 GAS was
nonetheless incompetent to inhibit Stat-1-mediated promoter function
(Fig. 4
and 5
above; Ref. 33). Moreover, Stat6 and
Stat6
C have similar affinity for the IRF-1 GAS as determined by cold
oligo competition experiments (Fig. 5
C). It is known that
C/EBP-ß enhances the affinity of Stat6 for DNA binding
(58). Thus, it might be speculated that Stat6
C may have
lower affinity for the IRF-1 GAS compared with Stat6, as the C terminal
of Stat6 might be required for C/EBPß-mediated DNA binding. However,
the presence of C/EBP sites in the IRF-1 promoter has not been
demonstrated. Moreover, Stat6 and Stat6
C were equally able to
cooperate with C/EBP in assays of the enhancement of binding to the
composite C/EBP-Stat6 site of the
H chain germline promoter
(58). Thus, any effects of binding cooperativity in this
system remain speculative. We have further shown that restoration of
the two Stat6 TADs either as homo- or heterodimers to Stat6
C is
essential for IL-4-mediated trans-activation and is also
necessary and sufficient to restore the inhibitory activity to this
mutant whereas a single domain is not. Taken together, these data are
inconsistent with a model of direct competition for access to DNA to
explain the observed Stat6-dependent inhibition through the IRF-1
GAS.
Direct inhibition at the level of DNA binding had been proposed but is
rendered unlikely by the evidence as discussed above. An alternative
model for IL-4 inhibition of monokine induced by IFN-
was later
proposed based on the coimmunoprecipitation of Stat6 and CBP
(53). It was hypothesized that Stat6 TADs may sequester
limiting pools of a coactivator essential for Stat1 function. Indeed,
Stat1 activated by IFN-
appears to decrease M-CSF-induced
trans-activation of an AP-1 element through titration of a
limiting pool of CBP (51, 52). Similarly, sequestration of
CBP or the homologous protein p300 has been proposed as the mechanism
by which the adenovirus E1A protein inhibits transactivation by
IFN-
-dependent Stat2 or IFN-
-activated Stat1 (59).
The failure of a Stat6 mutant, lacking the TADs necessary for
coactivator interaction, to inhibit the IRF-1 promoter and the
restoration of the inhibitory effect by the addition of the TADs are
consistent with the possibility that a coactivator essential for Stat1
activation may play a role in the integration of the Stat1 and Stat6
pathways. However, despite the essential role of p300/CBP as a
coactivator of Stat1 (51, 52), we find that cotransfection
of CBP is insufficient to reverse the Stat6-dependent inhibitory
activity of IL-4. Moreover, the inability of Stat6 DNA binding mutants
(with intact TADs) to inhibit the IRF-1 promoter is inconsistent with
competition for an additional coactivator essential for Stat1
function.
The final model conforming with the requirement for the Stat6 TADs for
an inhibitory effect is that IL-4 activates the transcription of a
specific inhibitor of the Stat1 pathway. In support of this model, we
have observed that Stat6
C, a trans-dominant inhibitor of
Stat6, can significantly attenuate Stat6-mediated inhibition of the
IRF-1 promoter when both Stat6
C and wild-type Stat6 are transfected.
Moreover, we have demonstrated that a pair of Stat6 transcription
activation domains is essential for both Stat6-mediated transcription
activation and inhibition of IFN-
inducibility, a result consistent
with the model of Stat6-mediated activation of a specific inhibitor.
While there is no evidence that such specific inhibitors suppress
cytokine signaling under physiological conditions and it is unclear
whether the kinetics of induction could be sufficiently rapid to
repress Stat-regulated transcription, there are specific inhibitors of
Stat DNA binding activity (60, 61). Protein inhibitor of
activated Stat1 associates specifically with Stat1 and inhibits its DNA
binding activity when added to mobility shift reactions at
supraphysiologic concentrations (60, 61). Although
mobility shift data did not detect an inhibitory effect of IL-4 on the
DNA binding activity of Stat1 (Fig. 3
and 5
; Ref. 32), it
remains conceivable that a physiologically important Stat1 inhibitor
induced by IL-4 dissociates during nuclear extraction or mobility shift
reactions. Although there is no precedent for such mechanisms, these in
vitro reactions would not detect IL-4-inducible inhibitors that block
the Stat1
TAD or alter its phosphorylation status (62).
Other cytokine-induced inhibitors of Jak like the suppressors of
cytokine signaling (SOCS) proteins regulate Stat phosphorylation
(38, 63, 64) and may be implicated in IL-4-mediated
inhibition of Stat1 activity. Indeed IL-4 does induce certain SOCS
transcripts in a mixed population of bone marrow cells (63, 64). However, our data are inconsistent with the involvement of
SOCS in IL-4-mediated inhibition of Stat1 activity, as comparable
levels of Stat1-DNA complexes are observed with or without IL-4.
Moreover, other investigators have observed no inhibition by IL-4 of
IFN-induced Jak activity. Thus, while it is likely that SOCS-like
inhibitors are induced by IL-4, these findings suggest that they are
not sufficient to account for the observed Stat6-mediated inhibition of
the IRF-1 promoter in the systems analyzed. This study has demonstrated
that IL-4 inhibits an IFN-induced promoter by a Stat6-dependent
mechanism, and the GAS element is a sufficient target for this
Stat6-mediated inhibition. The data are inconsistent with mechanisms
involving competition between Stat1 and Stat6 for either DNA binding or
a coactivator, whereas the results support a model in which Stat6
induces the transcription of a specific inhibitory gene product.
 |
Acknowledgments
|
|---|
We gratefully acknowledge the technical assistance of W. Armistead;
generous gifts of purified recombinant human IL-4 from J. de
Vries, and the expression constructs from R. Goodman and from
C. Horvath and J. Darnell; helpful discussions with R.
Stein, T. Aune, and J. Darnell; and a critical
reading of the manuscript by A. Richmond and G.
Oltz.
 |
Footnotes
|
|---|
1 This work was supported by National Institutes of Health Grant R 01 GM42550 (to M.B., S.G., and J.Y.), Core Functions and Pilot Project support funded through the Vanderbilt Diabetes Research and Training Center (P60 DK20593), and the Scholars Program of the Leukemia Society of America (to M.B.). 
2 Address correspondence and reprint requests to Dr. Mark Boothby, Department of Microbiology and Immunology, AA-4214B Medical Center North, Vanderbilt University Medical School, Nashville, TN 37232-2363. E-mail address: 
3 Abbreviations used in this paper: IRF-1, IFN-regulated factor 1; Jak, Janus kinase; GAS, IFN-
-activated sequence; CREB, cAMP response element binding (protein); CBP, CREB binding protein; IL-4R
, IL-4 receptor
-chain; TK, thymidine kinase; SOCS, suppressor of cytokine signaling; TAD, transcription activation domain; CAT, chloramphenicol acetyltransferase; C/EBP, CCAAT/enhancer binding protein. 
Received for publication February 9, 1999.
Accepted for publication August 10, 1999.
 |
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