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The Journal of Immunology, 1999, 162: 5398-5406.
Copyright © 1999 by The American Association of Immunologists

T Cell Responses to Gram-Negative Intracellular Bacterial Pathogens: A Role for CD8+ T Cells in Immunity to Salmonella Infection and the Involvement of MHC Class Ib Molecules1 ,2

Wei-Feng Lo*, Helena Ong*, Eleanor S. Metcalf{dagger} and Mark J. Soloski3,*

* Division of Molecular and Clinical Rheumatology, Department of Medicine, and Graduate Program in Immunology, Johns Hopkins University School of Medicine, Baltimore, MD 21205; and {dagger} Department of Microbiology and Immunology, Uniformed Services University of the Health Sciences, Bethesda, MD 20814


    Abstract
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
Despite being a major group of intracellular pathogens, the role of class I-restricted T cells in the clearance of Gram-negative bacteria is not resolved. Using a murine typhoid model, a role for class I-restricted T cells in the immune response to the Gram-negative pathogen Salmonella typhimurium is revealed. Class I-deficient ß2-microglobulin-/- mice show increased susceptibility to infection with S. typhimurium. Following infection, CD8+ CTLs specific for Salmonella-infected targets can be readily detected. The Salmonella-specific CTLs recognize infected H-2-mismatched targets, suggesting the involvement of shared class Ib molecules. Studies using transfectants expressing defined class Ia and class Ib molecules indicate the involvement of the class Ib molecule, Qa-1. Ab-blocking studies and the measurement of bacteria-specific CTL frequencies identified Qa-1 as a dominant restricting element. The Qa-1-restricted CTL recognition depends on TAP and proteasome functions. Surprisingly, Qa-1-restricted CTLs recognized cells infected with other closely related Gram-negative bacteria. Taken together, these observations indicate that Salmonella-specific CTLs recognize a cross-reactive epitope presented by Qa-1 molecules and, as such, may be novel targets for vaccine development.


    Introduction
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
Anumber of important bacterial pathogens infect, replicate, and persist within nucleated cells of the host. T cell-mediated immunity has proven to be a critical factor in the effective clearance of many such intracellular bacterial pathogens. In the case of Mycobacterium tuberculosis and M. bovis infection, both CD4+ MHC class II-restricted and CD8+ MHC class I-restricted T cells play a key role in anti-microbial immunity (1, 2, 3). CD8+ T cells have also been shown to be a critical component of the protective immune responses to the Gram-positive rod, Listeria monocytogenes (2, 3, 4, 5). Initially, the role of CD8+ CTLs in the clearance of intracellular infections was attributed to the ability of bacteria to encode proteins (hemolysins) that facilitate escape from the phagolysosome, gain entrance to the cytosol, and access the MHC class I processing pathway (6, 7). Indeed, Listeria strains with mutations in the hemolysin genes have significantly reduced virulence (8, 9). However, it has recently been shown that macrophages infected either with wild-type or with a hemolysin-negative mutant Listeria are equally recognized by Listeria-specific CD8+ CTLs (10). Thus, while hemolysin is clearly a virulence factor, class I Ag presentation of bacterial Ags is not dependent on its presence or production. This observation implies that intracellular bacteria need not have a mechanism of escape into the cytosol to access the class I presentation pathway. Studies delivering exogenous soluble Ags into class I pathways under a variety of phagocytic stimuli are supportive of a phagosome-to-cytosol pathway (11, 12, 13).

Salmonella species are intracellular Gram-negative bacterial pathogens that infect both phagocytic and non-phagocytic cells. These pathogens cause a range of diseases including enteric fever and gastroenteritis (14, 15, 16). Athymic mice and TCR-{alpha}ß-deficient mice have impaired abilities to clear Salmonella infection (17, 18, 19). In studies that utilized a natural oral challenge model, Mastroeni et al. demonstrated that depletion of either CD8+ or CD4+ T cells impaired the ability to transfer protective immunity to virulent S. typhimurium (20, 21). Similarly, using an adoptive transfer model, other investigators demonstrated that removal of both CD4+ and CD8+ T cells completely abrogated transfer of protective immunity to systemic infection with virulent S. abortusovis, while depletion of either CD4+ or CD8+ T cells, in particular, impaired the protective effect (22). Collectively, these studies indicate that CD4+ and CD8+ T cells act synergistically to control infection with virulent Salmonella species.

Limited information is available on the properties of CTLs induced following infection with Salmonella. Studies that analyzed the capacity of recombinant S. typhimurium expressing a foreign protein, e.g., OVA or Plasmodium berghei circumsporozoite gene, to serve as a vaccine carrier, demonstrated that target protein-specific CD8+ T cells were induced (23, 24, 25). Moreover, CD8+ effectors capable of mediating lectin-dependent cytotoxicity and delayed-type hypersensitivity were elicited in mice challenged with Salmonella (26, 27). Also, when S. enteritidis-immunized mice were challenged with the virulent S. typhimurium strain C5, CD8+ CTLs capable of specifically killing P815 cells infected with S. enteritidis were detected. Taken together, these results indicate that Salmonella-derived Ags can be processed and presented to CD8+ CTLs and suggest that such cells may be an important defense mechanism to virulent pathogens.

In the present study, we assessed the contribution of CTL response to host defense against S. typhimurium. The finding that ß2-microglobulin (ß2m)-/-4 mice are more susceptible to infection with both virulent and avirulent S. typhimurium illustrates a role for CTLs in the eradication of intracellularly localized Gram-negative bacteria. CD8+ CTLs that recognize Salmonella-infected cells can only be readily detected in mice that have been challenged with virulent S. typhimurium. Furthermore, our data prove that a significant fraction of the Salmonella-specific CTLs elicited in vivo recognize infected targets in an MHC class Ib-restricted fashion and that the nonclassical class Ib molecule Qa-1b is a dominant restricting element. Finally, our findings demonstrate that processing of the Qa-1b-epitope is TAP- and proteasome-dependent. Taken together, these results reveal a novel mechanism for Ag presentation by H2-T23-encoded Qa-1 molecules and expand the range of pathogens for which class Ib molecules are relevant Ag-presenting structures to include the Gram-negative bacteria.


    Materials and Methods
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
Bacterial strains and growth conditions

Wild-type virulent S. typhimurium strain C5 (C5), S. typhimurium strain SL3235 Aro- (SL3235), S. dublin strain Lane, S. enteritidis strain 11RX, and Escherichia coli strain HB101 were grown in Antibiotics Medium 3 (Difco Laboratories, Detroit, MI) broth or on Luria-Bertani (LB) agar plates. Listeria monocytogenes (ATCC 43251) was grown in bovine heart infusion medium (Difco). The number of bacteria was calculated from a standard curve showing CFUs vs OD at 600 nm (A600). Bacterial strains were grown overnight in LB medium at 37°C in a shaking water bath. The following day, bacterial cultures in the saturation density were diluted 1:10 and grown to midlogarithmic phase (A600, -0.5 to 0.6). Bacterial cultures were centrifuged and washed in PBS twice before use.

Mouse strains and cell lines

C57BL/6 (B6, H-2b/Qa-1b) and CB6F1 (BDF1, H-2b/d/Qa-1b) mice were obtained from the National Cancer Institute, National Institute of Health, (Bethesda, MD). BALB/cJ (H-2d, Qa-1b) and C57BL/6J-B2mtm1Unc (B6-ß2m-/-, H-2b/Qa-1b) mice were obtained from The Jackson Laboratory (Bar Harbor, ME).

L cells transfected with H2-Kd and -Dd were a gift from Dr. Iwona Stroynowski (University of Texas Southwestern Medical Center, Dallas, TX). P815 (H-2d), J774 (H-2d), and L cells were cultured in DMEM supplemented with 10% FCS (DMEM-10). IC-21 (H-2b), RMA (H-2b) and RMA-S, (H-2b) were maintained in RPMI 1640 supplemented with 10% FCS (RP-10). L-Qa-1b (L-g37) (28), L-Ld, and L cells transfected with the pSV2-neo vector alone (LV) were cultured in the same medium as parent cell lines, except supplemented with G418 (Sigma, St. Louis, MO) at 600 µg/ml. L-Kd and L-Dd were grown in DMEM-10 with 1x hypoxanthine, aminopterin, thymidine (Sigma). A20 cells transfected with human B7.1 (A20-B7.1) were a gift from Dr. Hyam Levitsky (Johns Hopkins Oncology Center, Baltimore, MD) and cultured in RP-10 supplemented with G418 at 600 µg/ml. T cell medium (TCM) is composed of RPMI 1640 supplemented with all the ingredients as described previously (29), except gentamicin (50 µg/ml) was substituted for Pen-strep (MediaTech, Herndon, VA). Cell lines to be used for infection were maintained at 5% CO2 in the absence of antibiotics, except T cell cultures, which were incubated in 7.5% CO2 in the presence of gentamicin.

Measurement of susceptibility to in vivo bacterial infection

C57BL/6 and B6-ß2m-/- mice were injected i.p. with 1 x 106 SL3235 in 0.2 ml PBS. Survival of infected mice was scored every 2–3 days until day 65. On day 65, survivors of C57BL/6 and ß2m-/- were divided into subgroups and received an i.p. challenge with 1 x 106, 1 x 104, or 1 x 102 virulent C5 (9, 5, and 5 animals per subgroup, respectively, for the dose specified above). Survival was recorded for another 4 wk. Four naïve animals were each challenged with 1 x 106 C5 as controls. Where indicated, the {chi} square test was used to assess levels of significance.

In vivo infection regimens

Female 8- to 10-wk-old mice were injected i.p. with 1 x 106 SL3235 in 0.2 ml PBS, followed by an i.p. challenge of 105 C5 in 0.2 ml PBS given 3 wk after the SL3235 inoculation (27). Immune splenocytes were harvested on day 7 following C5 challenge and used for subsequent experiments.

In vitro infection of tumor cell lines

A modification of the procedure of Pope et al. (27) was utilized for infection of tumor cells. Briefly, 1 x 106 log-phase tumor cells and C5 were mixed at the multiplicity of infection of 100, dispensed in 1-ml aliquots into 15-ml conical tubes or in 0.2-ml aliquots into each well of 96-well U-bottomed plates for large-scale preparation. The bacteria-tumor cell suspensions were then centrifuged at 2000 rpm for 10 min, incubated at 37°C for 30 min, harvested, and washed in complete RP-10 three times. Cell pellets were resuspended at the density of 1 x 106/ml in RP-10, and the infected cells were incubated for 1 h at 37°C to allow processing of Ags. Infection of cells with S. dublin, S. enteritidis, and E. coli utilized the same protocol as described above. Generation of L. monocytogenes-infected J774 macrophages has been described (30). The efficiency of infection was assessed 2 h after the last wash step by an invasion assay as described previously (31) and by staining intracellular bacteria with the Diff-quik stain set (Baxter Scientific, Edison, NJ) per manufacturer’s instructions.

Establishment of Salmonella-specific CTLs

Immune splenocytes derived from BALB/c and from C57BL/6 mice were harvested from SL3235-infected animals 7 days after C5 booster. Suspensions of splenocytes were adjusted to 1 x 106/ml in TCM containing Con A (1 µg/ml), 2-ml aliquots were dispensed into the wells of 24-well flat-bottom plates (Corning Costar, Cambridge, MA) and incubated at 37°C for 3 days. On day 3, Con A blasts were harvested and pooled. Viable cells were counted, and the cell density adjusted according to the E:T ratios needed in 51Cr-release assays.

For in vitro stimulation, 5 x 106 BALB/c and 5 x 106 C57BL/6 immune splenocytes were stimulated with 2 x 105 irradiated (20,000 rads) C5-infected J774 and IC-21 cells, respectively, in each well of 24-well plates for 5 days before use as effector cells in 51Cr-release assays. For establishment of the CTL line SalT3, 5 x 106 CB6F1 immune splenocytes were coincubated with 2 x 105 irradiated C5-infected J774 cells in 2-ml aliquots in the wells of 24-well trays for 7 days. A week later, 2 x 105 irradiated C5-infected IC-21 cells were added to each well, and incubation continued for another week. At the end of the second week, the contents of each well were aspirated, centrifuged through lympholyte cell separation medium (Accurate Chemical, Westbury, NY) at 1500 rpm, and washed three times in DMEM. Beginning the third week of restimulation, 2 x 105 viable cells per well that recovered from the last wash were cocultured, first with C5-infected J774, and then with C5-infected IC-21 cells at 1-wk intervals. Included in each coculture were 5 x 106 irradiated (2000 rads) CB6F1 splenocytes per well in TCM supplemented with 10% rat Con A supernatant (Collaborative Biomedical, Bedford, MA) and {alpha}-methylmannoside (Sigma) at 10 g/L. SalTCTL3 was cloned by limiting dilution in the presence of C5-infected A20-B7.1 to achieve higher cloning efficiency. A microcytotoxicity assay was performed using C5-infected L-Qa-1b for those wells with evident cell growth. One of the positive CTL clones established using these conditions was further subcloned sequentially at 1 cell and 0.3 cells/well to generate SalTc 1.69. SalTc 1.69 was maintained by weekly restimulation with infected A20-B7.1 cells. The cellular composition was analyzed by flow cytometry with anti-Lyt2.2 MAb 2.43-FITC (1 µg) vs anti-L3T4 MAb GK1.5-PE (1 µg) and by anti-TCR-{alpha}ß-FITC (1 µg) vs anti-TCR-{gamma}{delta}-PE (1 µg). All Abs used for flow cytometry were purchased from PharMingen (San Diego, CA).

CTL assays and determination of bacteria-specific CTL frequencies

Infected and uninfected target cells (2 x 106) were labeled with 51Cr for 1 h. Labeled cells were washed with prewarmed (37°C) medium, resuspended in 2 ml TCM, centrifuged through 1.5 ml warm FCS, resuspended in 5 ml TCM, and allowed to incubate at 37°C for 1 h. Suspensions of labeled cells were then spun through FCS again and counted (27). The density of the labeled target cells was adjusted to 5 x 104/ml. A total of 100 µl (5 x 103 cells) of the labeled targets were dispensed into each well of 96-well U-bottomed plates and mixed with an equal volume of effector cells at the indicated E:T ratios. In Ab-blocking experiments using anti-T cell reagents, effectors were preincubated with either 10 µl anti-Lyt2.2 MAb 2.43 ascites (a gift from Dr. Hyam Levitsky) or 20 µg anti-L3T4 MAb GK1.5 (Becton Dickinson, San Jose, CA) per well for 1 h before the addition of target cells. In blocking studies using anti-class Ia/Ib mAbs, targets cells were preincubated with isotype-matched control Abs or mAbs reactive with H-2Kd/Dd (34-1-2S) (32), H-2Ld (30-5-7S) (33), or Qa-1b (6F10). The mAb 6F10 was produced by immunizing B6-Tlaa mice with a peptide from the unique {alpha}-2 domain of the Qa-1b molecule. The hybridoma derived from these mice is specific for Qa-1b as determined by flow cytometric analysis of spleen cell from Tla-region congenic mice and analysis of Qa-1b-transfected cell lines. A detailed description of the generation and characterization of this reagent is in preparation (H.O. and M.J.S., manuscript in preparation).

For measurement of bacteria-specific CTL frequencies by limiting dilution, immune splenocytes harvested from C5-infected BALB/c mice depleted of RBC by ammonium chloride were cultured in 11 graded doses (48 wells per dose) with 6 x 105 irradiated (2000 rads) syngeneic uninfected splenocytes and 5 x 104 C5-infected J774 (20,000 rads) in the presence of 20% rat Con A supernatant. A week later, half of the contents (100 µl) of each well was assayed for cytolytic activity against 51Cr-labeled 5 x 103 C5-infected P815 and C5-infected L-Qa-1b, respectively. Percent specific lysis >3 SDs of the mean taken from control wells without responders were scored positive. Fraction negative wells for each data point represent a set of 24 wells for a single dose of responders.

For cold target inhibition experiments, 5 x 10351Cr-labeled C5-infected P815 cells per well were mixed thoroughly with 2.5 x 105, 1 x 105, and 5 x 104 each of unlabeled C5-infected L-Qa-1b, uninfected L-Qa-1b, C5-infected L, and uninfected L cells before the addition of SalT3 at 2.5 x 104 per well. For experiments using metabolic inhibitors, P815 cells were preexposed to 50 µM Z-L3VS (a gift from Drs. Hidde Plough and Matthew Bogyo, Massachusetts Institute of Technology, Cambridge, MA) (34) or 1 µg/ml brefeldin A (Calbiochem, La Jolla, CA) for 2 h, washed three times with complete medium, and infected with C5 as described above. Coincubation of these labeled target cells with T cells was limited to 2 h to avoid recovery from inhibitory effects.

Following 4 h of incubation, the plates containing CTLs and labeled targets were centrifuged at 1500 rpm for 5 min. The amount of 51Cr released was determined by counting the radioactivity of 100 µl of culture supernatant from each well on a gamma counter (LKB Instruments, Gaitherburg, MD). The percent specific release was calculated as 100% x (cpm of experimental release - cpm of spontaneous release)/(cpm of total release in the presence of 1% Nonidet P-40 - cpm of spontaneous release). All CTL assays were performed in TCM supplemented with 10 g/L {alpha}-methylmannoside, and each data point represents the mean of triplicate samples. Percent SE of the raw counts representing each set of triplicate samples is < 10%. Spontaneous release was 5–15% of total release in the presence of Nonidet P-40, except for C5-infected J774 targets, in which spontaneous release was as high as 30% of total release, presumably due to apoptosis induced by invasive Salmonella (35).


    Results
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
Role of CD8+ T cells in the growth and susceptibility to infection with S. typhimurium

To determine the contribution of CD8+ T cells to anti-Salmonella immunity, we evaluated the susceptibility of B6-ß2m-/- (on C57BL/6 background, B6-ß2m-/-) and wild-type C57BL/6 (B6) mice to S. typhimurium infections. B6 mice are Itys (36) and, hence, highly susceptible to infection with virulent strains of S. typhimurium (LD50 < 101 in naive animals) (37). However, prior infection with avirulent strains of S. typhimurium induced protection against challenge with virulent organisms (38). To determine the contribution of class I-restricted T cell immunity to the development of protective immunity to S. typhimurium, B6 and B6-ß2m-/- mice were infected with the avirulent SL3235 Aro- strain of S. typhimurium (SL3235) and then challenged with the virulent C5 strain (C5). Infection with SL3235 caused mortality in B6-ß2m-/- mice as soon as day 16 (8%, p < 0.05), and, by day 65, 30% (p < 0.001) of B6-ß2m-/- had died (Fig. 1GoA). In contrast, all wild-type B6 mice survived without any mortality or significant morbidity. These results suggest a role for class I-restricted presentation of bacterial Ags to T cells in the initial resistance to avirulent S. typhimurium.



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FIGURE 1. Susceptibility of ß2m-/- class I-deficient mice to Salmonella infection. A, Age- and sex-matched (female 8- to 10-wk-old) B6 and B6-ß2m-/- mice were inoculated on day 0 with 1 x 106 S. typhimurium SL3235 and mortality scored until day 65. {chi} square analysis indicates that the increased susceptibility of B6-ß2m-/- mice is significant (p < .001). B, On day 65, B6 and B6-ß2m-/- mice previously infected with S. typhimurium SL3235 were divided into subgroups and challenged with 102 (5 mice/group), 104 (5 mice/group), or 106 (9 mice/group) S. typhimurium C5 and mortality monitored. B6 and B6-ß2m-/- mice (4 mice/group) that were not previously infected with S. typhimurium SL3235 were also challenged with 106 S. typhimurium C5 and monitored.

 
SL3235-inoculated and naive animals were then challenged with lethal doses of virulent C5 and susceptibility evaluated (Fig. 1GoB). Naive B6 and B6-ß2m-/- rapidly succumbed to infection with 106 C5 with 100% mortality within 3 days. However, SL3235-inoculated B6 and B6-ß2m-/- showed increased resistance to strain C5, surviving inoculation with 102 organisms, a dose that is lethal (LD50 <101 C5) to naïve animals (data not shown, and 37). However, this protective effect is more pronounced for B6 mice than for B6-ß2m-/- (Fig. 1GoB), since B6-ß2m-/- mice are consistently more susceptible to larger inocula of C5 (104-106 organisms). The increased susceptibility of B6-ß2m-/- to C5 challenge indicates a role for class I-restricted T cells in the generation of protective immunity to infection with virulent S. typhimurium.

Potent CTL responses can be elicited following challenge with a virulent S. typhimurium C5 strain

The studies using class I-deficient B6-ß2m-/- mice suggest a role for CD8+ T cells in immunity to S. typhimurium. To identify and characterize these cells, our initial studies focused on the detection of Salmonella-specific CD8+ CTLs in the spleens of infected mice. BALB/c (H-2d) or C57BL/6 (H-2b) mice were vaccinated with an avirulent strain of S. typhimurium SL3235 and challenged with 1 x 105 C5. Cytotoxic activity against C5-infected MHC-matched (H-2d) P815 targets was detected in BALB/c splenocyte populations recovered 1 wk after challenge with C5 (Fig. 2GoA). Restimulation of BALB/c splenocytes from C5-challenged (Fig. 2GoB), but not unchallenged, BALB/c mice (Fig. 2GoC) in vitro with Con A, yielded a population with enhanced cytotoxicity. This cytotoxicity could be completely blocked by anti-CD8 MAb (2.43) but not anti-CD4 MAb (GK1.5)(Fig. 2GoB), which suggests the major effectors as CD8+ T cells. Comparable enhancement of lytic activities could be achieved with in vitro restimulation with irradiated C5-infected syngeneic J774 macrophages (H-2d) (Fig. 2GoD). Analogous results were obtained using splenocytes derived from C57BL/6 mice (data not shown). Based on these observations, we concluded that, following infection with virulent S. typhimurium, CD8+ CTLs that recognize bacterial epitopes presented on class I molecules are readily detected in the spleens of Salmonella-infected mice.



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FIGURE 2. Detection of Salmonella-specific CTLs in infected BALB/c mice. BALB/c mice were infected with S. typhimurium Aro- attenuated strain SL3235 and, 3 wk later, either mock challenged (with PBS) or challenged with wild-type S. typhimurium C5. On day 7 following C5 challenge, immune splenocytes were harvested and assayed immediately (A), restimulated in vitro with Con A for 3 days (B), or restimulated in vitro with C5-infected J774 cells (D) and then assayed for CTL activity against C5-infected (filled symbols) or uninfected (open symbols) P815 (H-2d) cells in a 4-h 51Cr-release assay. B and D, A total of 10 µl anti-Lyt2 MAb 2.43 () ascites or 10 µg/ml anti-L3T4 GK 1.5 () were included for Ab-blocking studies. C, Immune splenocytes harvested from BALB/c mice infected with SL3235 without a rechallenge with C5 (or mock challenge) were activated with Con A in vitro for 3 days and used as effectors. The percent specific lysis at the indicated E:T ratios shown here represents the mean of triplicate samples. All data were generated from at least two separate experiments with similar results. The number of viable bacteria/P815 cells recovered from infected cells was 1.8 by averaging CFUs from three separate samples.

 
Previous studies have indicated that foreign Ags expressed by Salmonella can be processed and presented by class Ia molecules (39). However, it was not clear whether class Ib molecules could also serve a role in presenting Salmonella-epitopes. To address this issue, we determined whether the recognition by Salmonella-specific CTLs was class Ib-restricted by examining the specificity of Salmonella-specific CTLs against allogeneic targets. As shown in Fig. 3Go, effectors from C5-infected C57BL/6 mice (H-2b) recognized C5-infected syngeneic IC-21 (H-2b) macrophage cells as well as allogeneic C5-infected P815 (H-2d) targets. In addition, effectors from BALB/c (H-2d) mice recognized C5-infected syngeneic P815 cells and allogeneic C5-infected IC-21 targets. This recognition was CD8-dependent, and effectors from normal spleens are not cytotoxic (Fig. 3GoC). Collectively, these observations indicate that a significant fraction of Salmonella-specific CD8+ CTLs recognize Ags presented by shared class Ib molecules.



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FIGURE 3. Recognition patterns of Salmonella-specific CTLs. Immune splenocytes derived from C5-infected BALB/c (H-2d) (A and B) and C57BL/6 (H-2b) (C and D) were restimulated in vitro and tested for cytotoxicity against uninfected (open symbols) or infected (filled symbols) P815 cells (H-2d, squares) or IC-21 cells (H-2b, diamonds). In some experiments anti-Lyt2 MAb 2.43 () was included (A, C, and D). The average number of viable bacteria per IC-21 cell was 1.2.

 
Qa-1b is a dominant MHC class Ib-restricting element in Salmonella-specific CTLs

To characterize the role of class Ib Ag presentation structures, a Salmonella-specific CTL line was generated by in vitro restimulation of immune splenocytes with alternating MHC-disparate C5-infected cells. Immune splenocytes derived from BDF1 mice were restimulated in vitro with C5-infected J774 cells (H-2d, Qa-1b) followed by a second restimulation with IC-21 cells (H-2b, Qa-1b) 1 wk later. By alternation of H-2-disparate stimulators, T cells were selected for the capacity to recognize epitopes presented on shared Ag-presenting structures. Fig. 4GoA displays analyses of a T cell line SalCTL3, which demonstrate that this cell line recognizes Salmonella-infected P815 as well as IC-21 targets. This cell line is ~85–90% CD8+, TCR {alpha}ß+ (data not shown), and its CTL activity is completely blocked by anti-CD8 Abs (data not shown). To determine the involvement of class Ia vs class Ib Ag-presenting structures, a panel of class Ia and Qa-1b-transfected (L-Qa-1b) murine L cells were used as targets in CTL assays. Following exposure to S. typhimurium C5, only the L-Qa-1b cells were recognized by the T cell line SalCTL3 (Fig. 4GoB).



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FIGURE 4. Salmonella-specific CTL line SalCTL3 utilizes Qa-1b as a major restricting element. A Salmonella-specific CTL line (SalCTL3) was established by in vitro weekly restimulation of immune splenocytes isolated from BDF1 mice as detailed in Materials and Methods. This line was tested for lytic activity against uninfected (open symbols) and infected (filled symbols) P815 and IC-21 cells (A). B, Uninfected (open symbols) and infected (filled symbols) L cell fibroblasts transfected with Qa-1b, H2-Kd, -Dd, -Ld, and parent L cells were used as targets. Cell surface expression of Qa-1b, H2-Kd, -Dd, and -Ld on corresponding L cell transformants was confirmed by flow cytometry (data not shown). C, For cold target inhibition of the killing of 51Cr-labeled C5-infected P815 cells by SalCTL3, graded ratios of unlabeled, uninfected (open symbols), or C5-infected (filled symbols) P815, parent L cells or Qa-1b-transfected L cells were included as cold target competitors as detailed in Materials and Methods. The average number of viable intracellular bacteria/cell was ~0.45 for each of the L cell transformants. The percent inhibition was simply calculated as (% specific lysis in the absence of cold targets - % specific lysis in the presence of cold targets)/(% specific lysis in the absence of cold targets). Percent SE of the raw counts representing each set of triplicate samples is <10%. Specific lysis for C5-infected P815 cells in the absence of cold targets was 43.3% at the E:T ratio of 5:1. Specific lysis for 51Cr-labeled uninfected P815 cells was always <1% under this E:T ratio.

 
The study described above indicates that Qa-1b can present Salmonella-specific epitopes to CD8+ CTLs. However, this experiment did not allow us to determine whether the CTLs that utilize Qa-1 as an Ag-presenting structure are a major or a minor population within the CTL line SalCTL3. To address this issue, we utilized Salmonella-infected targets as cold-target competitors of labeled Salmonella-infected P815 cells. As shown in Fig. 4GoC, only C5-infected P815 or L-Qa-1b blocked the recognition of 51Cr-labeled Salmonella-infected P815 cells. No significant inhibition was observed with uninfected targets or infected targets that lacked Qa-1 expression. Interestingly, the infected L-Qa-1b cold targets were ~80–90% as effective as the infected syngeneic P815 targets. These results suggest that CTLs that recognize Salmonella epitopes presented on Qa-1 represent a significant fraction of the Salmonella-specific CTL activity within the T cell line SalCTL3.

We next examined whether a dominant role for Qa-1b as an Ag-presenting structure is also observed when unselected Salmonella-specific CTL populations are examined. In this study, immune splenocytes from C5-challenged BALB/c mice were restimulated in vitro with MHC-matched C5-infected J774 macrophages and assayed for cytolytic activity against C5-infected P815 cells. In parallel, various class Ia- and Ib-specific mAbs were included to test their capacity to block this recognition (Fig. 5GoA). The Qa-1b-specific mAb 6F10 blocked target cell recognition up to ~50%, while the class Ia-specific reagents 34-1-2S (anti-H-2Kd, Dd) and 30-5-7S (anti-H-2Ld) displayed significantly less blocking activity. To confirm this observation, restimulated immune splenocytes from C5-challenged BALB/c mice were also tested for their ability to recognize a panel of class Ia/Qa-1b-expressing L cells (Fig. 5GoB). Consistent with the above results, CTL effectors recovered from C5-challenged animals recognized only C5-infected Qa-1b-expressing L cell fibroblasts.



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FIGURE 5. Qa-1b is a dominant Ag-presenting molecule for Salmonella-specific CTL. A, Splenocytes from C5-infected BALB/c mice were restimulated in vitro with C5-infected J774 cells and assayed for their ability to recognize C5-infected P815 cells in the absence ({blacksquare}) or presence of 20 µg/ml of control IgG1 myeloma protein ({triangleright} ), anti-H-2Kd/Dd (34-1-2S,{circ}), anti-H-2Ld (30-5-7S,{triangleup}), or anti-Qa-1b (6F10 {triangledown}) or uninfected P815 cells ({diamond}). B, BALB/c immune splenocytes restimulated in vitro with C5-infected J774 cells were assayed using a panel of L cells expressing Qa-1b, H-2Kd, H-2Dd, or H-2Ld at an E:T ratio of 50:1. C, Measurement of Salmonella-specific CTL frequencies by limiting dilution analysis in immune BALB/c splenocytes against C5-infected P815 ({circ}) and L-Qa-1b ({blacksquare}) as detailed in Materials and Methods. The total number of CD8+ T cells containing 1 Ag-specific CTL was extrapolated where 37% (dotted line) of the wells of a given dilution yielded negative CTL activity. CTL frequencies for C5-infected P815 and L-Qa-1b cells were calculated according to FACS analysis of the immune splenocytes (39.1% CD4+, 13.3% CD8+, and 47.4% CD4-CD8-).

 
To determine the frequency of Qa-1b-restricted Salmonella-specific CTLs within the in vivo CTL population, limiting dilution analysis was performed. Splenocytes from C5-challenged BALB/c mice were restimulated in vitro at limiting dilution with C5-infected J774 cells. One week later, wells were split and assayed for cytotoxicity against C5-infected P815 cells (total Salmonella-specific CTLs) or C5-infected L-Qa-1b (Qa-1b-restricted Salmonella-specific CTLs). As shown in Fig. 5GoC, the calculated frequency of CTLs that recognize C5-infected P815 targets was 1:20,683, while the frequency of CTLs that display Qa-1b-restricted Salmonella-specific recognition was 1:39,655. If adjusted for the fraction of total immune splenocytes that were CD8+ (13.3%), 1:2,751 CD8+ T cells were Salmonella-specific, while 1:5,274 displayed Qa-1b-restricted recognition. Comparison of the two frequencies reveals that ~56% of the Salmonella-specific CTLs are Qa-1b-restricted (Fig. 5GoC), corroborating the Ab-blocking studies and identifying Qa-1b as a major restricting element for Salmonella-specific CTLs.

Characterization of Qa-1b-restricted recognition of Salmonella epitopes

A panel of Salmonella-specific CTL clones was established by limited dilution. Phenotypic analysis of these clones indicated that they were all CD8+, TCR-{alpha}ß+ and that the majority exhibited Salmonella-specific class Ib-restricted recognition, defined as the ability to recognize C5-infected P815 and IC-21 targets (data not shown). A representative clone, SalTc 1.69, was selected for further characterization and shown to specifically recognize C5-infected L-Qa-1b (Fig. 6GoA) and, therefore, was defined as Qa-1b-restricted.



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FIGURE 6. Characterization of a Qa-1b-restricted CTL clone derived from Salmonella-infected mice. The Salmonella-specific CTL line SalT3.2 was cloned by limiting dilution to generate a Qa-1b-specific CTL clone, SalTc 1.69, which was assayed against C5-infected (filled symbols) and uninfected (open symbols) L cells transfected with the pSV2-neo vector (LV) and L-Qa-1b cells (A), RMA and the TAP-defective variant RMA-S (B). The average intracellular CFUs for RMA and RMA-S assayed in A and B were 1.6 and 1.4, respectively. C, P815 targets were preincubated with brefeldin A (1 µg/ml) or Z-L3VS (50 µM) or left untreated ({blacksquare}) for 2 h, washed three times with warm medium, and then infected. Spontaneous release for all the pretreated P815 cells was always <15%.

 
To gain insights into the Ag-processing pathways that lead to the generation of Qa-1b-restricted Salmonella-specific epitopes, we analyzed the TAP and/or proteasome dependence of these epitopes. The results in Fig. 6GoB demonstrate that the Salmonella-specific T cell clone SalTc 1.69 recognized C5-infected RMA lymphoma cells, but not C5-infected TAP-defective RMA-S cells, suggesting that Qa-1b presents a TAP-dependent Salmonella-specific epitope. Pretreatment of target cells with brefeldin A, an inhibitor that has been shown to block transport from the endoplasmic reticulum (ER) to the cis-Golgi, and Z-L3VS, a potent irreversible proteasomal inhibitor (34) dramatically diminished the level of killing against C5-infected cells (Fig. 6GoC). Collectively, these data are consistent with characteristics of a "classical" class I pathway that includes proteasomal degradation, TAP-dependent translocation of epitopes across ER membranes, and ER-to-Golgi transport as key features.

To examine the epitope specificity of the Qa-1b-restricted T cell clone SalTc1.69, we tested its capacity to recognize J774 target cells infected with Gram-positive as well as several related Gram-negative bacteria. As expected, clone SalTc1.69 failed to recognize J774 macrophages infected with L. monocytogenes (Fig. 7GoB). Unexpectedly, SalTc1.69 recognized J774 cells infected with S. enteritidis, S. dublin, and E. coli (Fig. 7GoA). Taken together, these data suggest that clone SalTc1.69 recognizes a shared epitope presented by Qa-1b molecules on target cells infected with Gram-negative enteric bacteria closely related to S. typhimurium.



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FIGURE 7. SalTc 1.69 recognizes Gram-negative but not Gram-positive bacteria-infected target cells. A, J774 cells were either uninfected ({square}) or infected with C5 ({blacksquare}), E. coli strain HB101 (), S. enteritidis strain 11RX (), or S. dublin strain lane (), respectively, at an multiplicity of infection of 100 and used as targets for SalTc 1.69 recognition. B, Listeria-specific CTLs generated from BALB/c mice by in vitro stimulation with Listeria-infected J774 cells (63) were assayed for cytotoxic activity against Listeria-infected ({diamondsuit}) or -uninfected ({diamond}) J774 cells. In addition, SalTc 1.69 was assayed for cytotoxicity against Listeria-infected J774 cells (•).

 

    Discussion
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
The results of our studies comparing the susceptibility of B6-ß2m-/- and B6 mice after infection with avirulent and virulent S. typhimurium indicate a role for class I-restricted T cells in the immune response to Gram-negative intracellular pathogens. These findings are consistent with adoptive transfer studies demonstrating that Salmonella-specific Lyt-2+ T cells can transfer protective immunity to naïve recipients (22). However, our studies differ from those of Hess et al. (40), where no exacerbation was detected in ß2m-/- mice using the S. typhimurium Aro- strain SL7207. There are several possible explanations for the differences between the two studies, including the size of inocula (5 x 105 vs 106), route of administration (i.v. vs i.p.), and differences in Aro- strains utilized (SL7207 vs SL3235). This latter difference is likely significant since variation in the kinetics of in vivo bacterial growth and peak bacterial loads (104-105 per spleen for SL7207 vs 106-107 per spleen for SL3235) have been reported (40, 41). Thus, infection with S. typhimurium strain SL7207 resulted in a low-level infection that could be resolved via mechanisms dependent on class II-restricted CD4+ T cells (40). More severe systemic Salmonella infections, such as the vaccination with strain SL3235 or challenge with the virulent strain C5, required that the response include class I-restricted T cells for the clearance of bacterial infection. Therefore, as has been demonstrated for other intracellular bacteria, clearance of S. typhimurium requires the synergistic action of class II- and class I-restricted T cells. This suggests that effective vaccines against Salmonella would need to stimulate both class I and class II-restricted T cells.

Examination of spleen cells from mice inoculated with attenuated S. typhimurium followed by challenge with the virulent C5 strain demonstrated a strong Salmonella-specific CD8-dependent CTL response. However, this CTL activity was not evident following infection with the Aro- strain SL3235 alone and was only detectable following challenge with virulent Salmonella. This observation is consistent with previous reports but is surprising, given that B6-ß2m-/- were more susceptible to infection with the vaccine strain SL3235 than the wild-type B6 mice (27). Several studies have shown that avirulent strains of Salmonella have a limited capacity to invade and replicate intracellularly (42, 43). Thus, infection with avirulent strains could lead to a weak CTL response not detected in our assays. Alternatively, the increased sensitivity of B6-ß2m-/- to avirulent Salmonella could reflect a role for noncytolytic functions of class I-restricted CD8 T cells or NK1.1+ T cells that are also deficient in ß2m-/- (44). Interestingly, the levels of splenic NK1.1+ T cells increase in a time dependent fashion following infection with S. typhimurium, SL3235 (W.-F.L. and M.J.S., unpublished observation), which is suggestive of such a possibility.

CD1, H2-M3, and Qa-1 have all been implicated as Ag-presentation structures in the CTL responses to Mycobacterium and Listeria, but their relative contribution to the entire CTL response has not been measured. The results of our Ab-blocking studies and the bacteria-specific CTL frequency analysis, clearly demonstrate that Qa-1b restriction is a dominant feature of the CTL response to S. typhimurium. To our knowledge, this is the first demonstration that a class Ib Ag-presenting structure plays such a major role in the generation of an effector T cell response. These results indicate that, in addition to binding leader peptides derived from class I molecules and serving as a target for NK cells (45, 46), Qa-1 can also bind and present other peptide ligands relevant to protective immunity to intracellular bacterial pathogens.

The dominance of Qa-1 in this response was surprising given that the class Ib molecule, H2-M3, has been shown to present N-formyl-methionine peptides of prokaryotic origin to Listeria-specific CTLs. Nevertheless, L cells that express endogenous H2-M3 are only recognized by Salmonella-specific CTLs when transfected with Qa-1b. Thus, H2-M3 does not play a major role in presenting bacterial epitopes in the CTL response to this Gram-negative pathogen.

Class Ia-restricted CTLs specific for epitopes derived from recombinant foreign Ags expressed in Salmonella has been detected (23, 24, 47). Our results, showing that anti-H-2 K/D/L mAbs partially block the recognition of C5-infected targets by Salmonella-specific CTLs, indicate that a minor component of the CTL response generated following infection with S. typhimurium includes epitopes presented by class Ia molecules, although the class Ib response appears to dominate. It is noteworthy that, using a panel of transfected L cells, only Qa-1b-restricted Salmonella-specific CTLs could be identified. Previous studies examining recombinant plasmid-encoded epitopes presented on class Ia molecules found that such epitopes are efficiently presented by macrophages but not by epithelial cells (25, 48). In our studies, the class Ib-restricted CTLs characterized to date have the ability to recognize Salmonella-infected macrophages, as well as P815 plasmacytoma, L cells, and RMA T cell lymphoma targets. Thus, while class Ia- and Ib-restricted CTLs are evoked following virulent Salmonella infection, the class Ia-restricted CTL activity may be directed toward infected phagocytes, while the class Ib-restricted component of the CTL response may broadly target all Salmonella-infected cells. Given that Salmonella can infect phagocytic and nonphagocytic cells, the class Ib-restricted CTL population may be relevant to the efficient clearance of virulent infection and avoidance of a carrier state.

The finding that Qa-1 serves a dominant role in presenting Salmonella epitopes to murine CTLs may be relevant to the human CTL response to Salmonella infections in humans. Similar to murine Qa-1, the human class Ib molecule, HLA-E, can bind hydrophobic nonameric class I molecule-derived leader sequences, and the anchor residues relevant to binding HLA-E and Qa-1 are largely identical (49, 50). Based on these properties, Qa-1 and HLA-E are considered cross-species orthologues with overlapping peptide binding specificities. Thus, it is reasonable to speculate that HLA-E can bind and present Salmonella epitopes to Salmonella-specific human CTLs. Interestingly, studies that examined cellular immune responses generated following oral infection with an attenuated Salmonella vaccine-detected Salmonella-specific CTL activity that was blockable by the class I Ab W6/32 (51). Given that W6/32 can bind to HLA-A/B/C and to HLA-E molecules, such a population of cells may contain CTLs that recognize epitopes presented by both class Ia and Ib molecules. Recent studies suggest that HLA-E, like class Ia molecules, is capable of binding hydrophilic viral peptides (52), despite the tight specificity of the peptide-binding cleft (53). Accordingly, HLA-E and, likewise, Qa-1 may be fully functional as Ag presenting molecules.

Studies using alloreactive Qa-1b-specific CTL clones specific for the peptide AMAPRTLLL (Qdm), derived from the leader sequence of D region class I molecules, revealed that this peptide was presented in a TAP-dependent, but proteasome-independent fashion (29, 54), suggesting that peptides presented by Qa-1 might derive from a novel processing pathway. Our studies using a TAP-defective cell line, together with specific metabolic inhibitors of proteasome and class I biogenesis, indicate that Qa-1 can also present antigenic peptides processed through a proteasome/TAP-dependent classical class I pathway. It is uncertain if the requirement for functional TAP in our system reveals the generation of Qa-1b-bound peptide from cytosolic degradation or reflects the reduced proportion of peptide-loaded class I molecules on the cell surface (55). However, the inhibitory effect exerted by Z-L3VS favors the former possibility and indicates that Qa-1b can load and present peptides derived from multiple processing pathways.

It remains unclear how the Salmonella-derived Ags gain access to the cytosol for proteasome-dependent degradation. Salmonella infects host cells and remains predominantly, if not exclusively, in the endosomal compartments. Several mechanisms have been proposed for the loading of Salmonella-derived peptide onto class I molecules. In one, antigenic proteins are transported into the cytosol via a "leakage" mechanism where they intersect the MHC class I pathway (10, 12, 13). This class I pathway has been demonstrated to operate in a subset of professional APCs (56), although there are other examples of phagocytic uptake of foreign Ags by keratinocytes and fibroblasts (12). An alternative pathway, or peptide regurgitation model, has been described where peptides generated within an endosomal compartment are transported extracellularly and load mature class I molecules on the cell surface (57, 58). This latter pathway has been shown to be both TAP- and proteasome-independent and is exclusively associated with phagocytic cell types. Our observations that phagocytic and nonphagocytic cell types are capable of presenting the Qa-1b-restricted Salmonella epitopes imply a third model where bacterial proteins can gain access to class I processing pathways in a variety of cell types. Recently it has been demonstrated that S. typhimurium can direct the translocation of selected bacterial proteins into nonphagocytic host cells through type III protein secretion system (59). This mode of Ag delivery has recently been exploited to transfer viral epitopes into host cytosol for class I-restricted recognition (60).

It has been argued that epitopes presented by class Ib molecules would be novel targets for vaccines since their conserved nature would facilitate the generation of protective immunity that is independent of MHC polymorphism (61). The finding that Qa-1-restricted CTLs are a significant component of the CD8+ CTL response to virulent Salmonella infection suggests that bacterial epitopes presented by Qa-1 may be of use in the design of vaccines to induce protective immunity to bacterial infections. Our data indicate that epitopes presented by Qa-1b are shared among Salmonella species, as well as the closely related Gram-negative bacterium E. coli. Thus, such a vaccine may also provoke immunity that is cross-reactive with other Gram-negative pathogens. It is interesting to note that following infection of host macrophages, the two dominant proteins expressed by Salmonella are GroEL and DnaK (62). These and perhaps other highly conserved bacterial proteins may prove to be targets for presentation by Qa-1 and recognition by CTLs.


    Acknowledgments
 
We thank Ms. Claire Kilmartin for excellent technical assistance in the bacterial susceptibility studies, and Drs. Robert Siliciano and Jonathan Schneck for their critical reading of the manuscript and timely suggestions.


    Footnotes
 
1 This work was supported by National Institutes of Health Grants RO1AI20922 and RO1AI42287, an Investigator Award from the Maryland Chapter of the National Arthritis Foundation (to M.J.S.), and National Institutes of Health Grant RO1AI32951 and Uniformed Services University of the Health Sciences Grant R07FE (to E.S.M.). Back

2 Under an agreement between PharMingen and Johns Hopkins University, the authors are entitled to a share of sales royalty received by the University from PharMingen, as a result of sales of anti-Qa-1b mAbs. The terms of this arrangement are being made by the University in accordance with its conflict of interest policies. Back

3 Address correspondence and reprint requests to Dr. Mark J. Soloski, Department of Medicine Ross Research Building, Room 1042, Johns Hopkins University School of Medicine 720 Rutland Avenue, Baltimore, MD 21205. E-mail address: Back

4 Abbreviations used in this paper: ß2m, ß2-microglobulin; C5, Salmonella typhimurium strain C5; SL3235, S. typhimurium strain SL3235 Aro-; TCM, T cell medium; B6-ß2m-/-, ß2m knock-out on the C57BL/6 background. Back

Received for publication November 23, 1998. Accepted for publication February 2, 1999.


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