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Regulation of the Type IV Class II Transactivator Promoter in Astrocytes1


Departments of
*
Cell Biology and
Physiology and Biophysics, University of Alabama, Birmingham, AL 35294
| Abstract |
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-inducible class II MHC expression.
The CIITA gene is controlled by multiple independent promoters; two
promoters direct constitutive expression, while another, the type IV
CIITA promoter, mediates IFN-
-induced expression. We investigated
the molecular regulation of IFN-
-induced type IV CIITA promoter
activity in astrocytes. IFN-
inducibility of the type IV CIITA
promoter is dependent on three cis-acting elements
contained within a 154-bp fragment of the promoter; the proximal
IFN-
activation sequence (GAS) element, the E box, and the proximal
IFN regulatory factor (IRF) element. Two IFN-
-activated
transcription factors, STAT-1
and IRF-1, bind the proximal GAS and
IRF elements, respectively. The E box binds upstream stimulating
factor-1 (USF-1), a constitutively expressed transcription factor.
Furthermore, STAT-1
binding to the proximal GAS element is dependent
on the binding of USF-1 to the adjacent E box. Functionally, the
proximal IRF element is essential for IFN-
induction of type IV
CIITA promoter activity, while the proximal GAS and E box elements
contribute to the IFN-
inducibility of this promoter. In astrocytes,
TNF-
enhances IFN-
-induced class II MHC transcription. Our
results demonstrate that TNF-
does not enhance IFN-
-induced
transcriptional activation of the type IV CIITA promoter, indicating
that the enhancing effect of TNF-
is mediated downstream of CIITA
transcription. These results define the molecular basis of IFN-
activation of the type IV CIITA promoter in
astrocytes. | Introduction |
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(for review, see 1).
Aberrant expression of class II MHC Ags has been postulated to be
involved in the progression of various diseases, such as rheumatoid
arthritis, insulin-dependent diabetes mellitus, inflammatory bowel
disease, and multiple sclerosis
(MS),3 all of which are thought
to be of autoimmune origin (for review, see 2).
The regulation of class II MHC genes occurs primarily at the
transcriptional level, and a non DNA-binding protein, class II
transactivator (CIITA), has been shown to be the master control factor
for class II MHC transcription (for review, see 1 and 3). CIITA
is essential for the transcriptional activation of class II MHC gene
expression and is thought to function as a coactivator through
interactions with specific DNA binding proteins bound to the conserved
regulatory elements in the class II MHC promoter (4, 5). As well, CIITA
interacts with TFIIB and TAF proteins, both components of the basal
transcription machinery (6, 7). CIITA is required and is the major
rate-limiting factor for both constitutive and inducible class II MHC
expression (8). Constitutive CIITA expression is restricted to cell
types that are constitutively class II MHC positive (9), while in class
II MHC-negative cells, CIITA expression is lacking, but can be induced
upon stimulation with IFN-
(10, 11, 12, 13). Transfection of a CIITA
expression construct into class II MHC-negative cells results in the
expression of class II MHC mRNA and protein in the absence of IFN-
stimulation, indicating that overexpression of CIITA is able to bypass
the requirement of IFN-
-induced signaling (10, 13, 14). The critical
role of CIITA in class II MHC expression has been demonstrated in
CIITA-deficient mice; these mice lack both constitutive and
IFN-
-inducible class II MHC expression, except for low expression on
a subset of thymic epithelial cells (15).
Recently, it has been shown that expression of the CIITA gene is
controlled by the alternative usage of multiple distinct promoters:
constitutive expression in dendritic cells and in B lymphocytes by
promoter I and promoter III, respectively, and IFN-
-inducible
expression in a melanoma cell line by promoter IV (16). Sequence
analysis of the type IV CIITA promoter demonstrated the presence of
numerous cis-acting elements, including an IFN-
activation sequence (GAS), an E box, and an IFN regulatory factor (IRF)
element (17). As well, the human type IV CIITA promoter contains an
NF-
B binding element and a NF-GMa site. In melanoma cells, the GAS
and IRF elements bind the IFN-
-regulated transcription factors
STAT-1
and IRF-1, respectively (17). The E box is bound by
constitutively expressed upstream stimulating factor-1 (USF-1), a
transcription factor belonging to the basic-helix-loop-helix/leucine
zipper family (17). All three of these cis-acting elements
(GAS, E box, and IRF-1) are essential for IFN-
-induced activation of
the type IV CIITA promoter in melanoma cells (17).
Furthermore, a cooperative interaction of IFN-
-activated
STAT-1
and constitutively expressed USF-1 is required for IFN-
activation of the type IV CIITA promoter (17).
Astrocytes are the major glial cell in the central nervous system
(CNS). These cells are critical for the development and support of
neurons, the repair of injured neurons, the formation and maintenance
of the blood-brain barrier, and the uptake of neurotransmitters such as
glutamate (for review, see 18). Recent work indicates that
astrocytes are also involved in immunological events occurring within
the brain due to their ability to produce and respond to a variety of
cytokines and chemokines, express adhesion molecules such as ICAM-1 and
VCAM-1, and express class I and II MHC Ags upon activation (for review,
see 18 and 19). In vitro, astrocytes can be induced to express
class II MHC upon exposure to IFN-
, and the inclusion of TNF-
enhances IFN-
-induced class II MHC expression (20, 21). The
documentation of class II MHC-positive astrocytes in disease states
such as MS and experimental allergic encephalomyelitis, an animal model
for MS, has been controversial, with some investigators finding such
cells and others unable to detect them (22, 23, 24, 25). There are conflicting
reports on the ability of astrocytes to function as APCs. Some
investigators have shown that class II MHC-positive astrocytes function
as APCs in vitro (20, 26, 27, 28, 29), although other groups have reported that
class II MHC-positive astrocytes are unable to induce the proliferation
of T cells (30, 31). A recent study has demonstrated that
IFN-
-treated astrocytes, which are induced to express B7-1, can
activate naive T cells (27), while another has shown that class II
MHC-positive astrocytes are effective APCs for Th2 cell activation
(28). There are also reports that class II MHC-positive astrocytes
transmit a suppressive and/or apoptotic signal to CD4+ T
cells (30, 32), possibly due to the lack of B7 expression. Thus, the
precise role of astrocytes as APCs is still unclear, i.e., whether they
activate or inhibit T cell function.
In this study we wanted to determine the molecular basis underlying
CIITA gene expression in astrocytes. The full-length type IV promoter
of the human CIITA gene was cloned and analyzed for IFN-
inducibility in astrocytes. Functional analysis of CIITA promoter
constructs revealed that the cis elements that are necessary
and sufficient for IFN-
induction of type IV CIITA promoter activity
are located within 154 bp of the transcription start site (TSS).
Mutagenesis analysis revealed that the proximal IRF element is
essential for IFN-
induction of type IV CIITA promoter activity,
while the proximal GAS element and adjacent E box element contribute to
IFN-
inducibility of the CIITA promoter. STAT-1
binds to the
proximal GAS element and is dependent on the binding of USF-1 to the E
box. Furthermore, the IRF-1 transcription factor binds to the proximal
IRF element of the CIITA promoter. Collectively, these results
demonstrate that in astrocytes, the IRF element and IRF-1 transcription
factor are critically important for IFN-
induction of type IV CIITA
promoter activity.
| Materials and Methods |
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Primary glial cell cultures were established from neonatal rat cerebra as described previously (33). Cells were cultured in DMEM, high glucose formula supplemented with glucose to a final concentration of 6 g/l, 2 mM glutamine, 0.1 mM nonessential amino acid mixture, 0.1% gentamicin, and 10% FBS (HyClone, Logan, UT). After 2 wk in primary culture, oligodendrocytes and microglia were removed by mechanical dislodgement. Astrocytes were harvested by trypsinization (0.25% trypsin and 0.02% EDTA) and monitored for purity by immunofluorescence. Astrocyte cultures were routinely >97% positive for glial fibrillary acidic protein, an intracellular Ag unique to astrocytes (34).
Reagents
Rat rIFN-
was purchased from Life Technologies (Grand Island,
NY), and rat rTNF-
was obtained from BioSource International
(Camarillo, CA). Polyclonal antiserum to STAT-1
was a gift from
Berlex Biosciences (Richmond, CA). Polyclonal antisera against STAT-3,
STAT-6, USF-1, IRF-1, and IRF-2 were purchased from Santa Cruz
Biotechnology (Santa Cruz, CA), while antiserum against STAT-5 was
obtained from Zymed (San Francisco, CA).
CIITA promoter constructs
The sequence for the primers used to PCR amplify a 1703-bp DNA
fragment of the type IV promoter of the human CIITA gene was derived
from that reported previously (16). The sense primer is located at the
3' end of the type III promoter and has the sequence
GCCTGGCTCCACGCCCTGCTG, and the antisense primer is located at the
3' end of the type IV promoter and has the sequence
CGCTGTTCCCCGGGCTCCCG. PCR was performed with the Taq PCR
Core Kit (Qiagen, Santa Clarita, CA) according to the manufacturers
instructions as previously described (35). The resulting 1703-bp
fragment was gel purified and ligated into linearized pCRII vector
(Invitrogen, Carlsbad, CA). The complete sequence of the insert was
obtained by automatic sequencing, which was performed by the University
of Alabama at Birmingham Center for AIDS Research Molecular Biology
Core Facility. The 1703-bp insert was released from pCRII by digestion
with the restriction enzyme EcoRI and gel purified, and the
restriction ends were blunted with the Klenow fragment of DNA
polymerase I according to the manufacturer (Promega, Madison, WI). The
blunt-ended fragment was ligated into the SmaI site of the
pGL2-Basic vector, which contains the gene for luciferase as reporter.
The designated name for this construct is hCIITAp1.7. Plasmid
constructs containing deletions in the promoter (D1, D2, D4, and D5)
were prepared as follows. Aliquots of the hCIITAp1.7 construct were
subjected to digestion with the restriction enzyme XhoI,
giving rise to a 1020-bp XhoI fragment that was gel purified
and subcloned into pGL2-Basic, generating the deletion construct
hCIITAp-D1. The hCIITAp1.7 construct was also digested
with SmaI, generating a 301-bp SmaI fragment;
with BstXI/KpnI, generating a 229-bp fragment; or
with SacI/KpnI, generating a 155-bp fragment that
was subcloned into pGL2-Basic, creating the deletion constructs
hCIITAp-D2, hCIITAp-D4, and hCIITAp-D5, respectively. The deletion
construct hCIITAp-D3 was generated by religating the
hCIITAp1.7 construct after deleting a 535-bp KpnI fragment,
then inserting a 99-bp fragment (-24 to +75) into the Mlu1
site. A 129-bp (-54 to +75) PCR fragment was inserted into the
XhoI site of pGL2-Basic to generate the deletion construct
hCIITAp-D6 (see Fig. 1
). The
site-directed mutation constructs, hCIITA-GAS, hCIITA-E box,
hCIITA-IRF, hCIITA-GAS + IRF, and hCIITA-GAS + E box (Fig. 2
), were generated on the hCIITAp1.7
plasmid backbone using the QuikChange Site-Directed Mutagenesis Kit
(Stratagene, La Jolla, CA) following the manufacturers instructions
and were confirmed by sequencing.
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Ten micrograms of the hCIITA promoter constructs (both CIITA
deletion and mutant constructs) were cotransfected with 1 µg of the
pCMV-ß-galactosidase construct into 3 x 106
astrocytes by electroporation with a Bio-Rad Gene Pulser set at 250 V
and 960 µF as previously described (36). After transfection, cells
were allowed to recover for 18 h before treatment with IFN-
and/or TNF-
for 12 h, which we have previously determined to be
optimal for IFN-
-induced activation (data not shown). Cells were
washed with PBS and lysed with 180 µl of lysis buffer containing 25
mM trisphosphate (pH 7.8), 2 mM DTT, 2 mM diaminocyclohexane
tetra-acetic acid, 10% glycerol, and 1% Triton X-100. Extracts were
assayed in triplicate for luciferase activity in a volume of 130 µl
containing 30 µl of cell extract, 20 mM tricine, 0.1 mM EDTA, 1
mM magnesium carbonate, 2.67 mM MgSO4, 33.3 mM DTT,
0.27 mM coenzyme A, 0.47 mM luciferin, and 0.53 mM ATP, and light
intensity was measured using a luminometer (Promega). Luciferase
activity was integrated over a 10-s period. Extracts were also assayed
in triplicate for ß-galactosidase enzyme activity as previously
described (37). The luciferase activity of each sample was normalized
to ß-galactosidase activity to calculate relative luciferase
activity.
Nuclear extracts and electrophoretic mobility shift assay (EMSA)
Nuclear extracts from astrocytes were prepared as previously
described (36). Cells were grown in 100-mm dishes, allowed to adhere
overnight, and then stimulated in serum-free medium with or without
IFN-
for 12 h. After treatment cells were washed with cold PBS,
harvested by scraping, and pelleted. Cells were resuspended in 1 ml of
buffer A (10 mM KCl, 20 mM HEPES, 1 mM MgCl2, 1 mM DTT, 0.4
mM PMSF, 1 mM NaF, and 1 mM Na3VO4), incubated
on ice for 10 min, and pelleted at 1,000 x g for 10
min. Pellets were resuspended in 0.5 ml of buffer A plus 0.1% Nonidet
P-40, incubated on ice for 10 min, and centrifuged at 3,000 x
g for 10 min. The nuclear pellet was resuspended in 1 ml of
buffer B (10 mM HEPES, 400 mM NaCl, 0.1 mM EDTA, 1 mM
MgCl2, 1 mM DTT, 0.4 mM PMSF, 15% glycerol, 1 mM NaF, and
1 mM Na3VO4) and incubated for 30 min at 4°C
with constant gentle mixing. Nuclei were then pelleted at 14,000
x g for 30 min, and extracts were dialyzed for 2 h at
4°C against 1 l of buffer C (20 mM HEPES, 200 mM KCl, 1 mM
MgCl2, 0.1 mM EDTA, 1 mM DTT, 0.4 mM PMSF, 15% glycerol, 1
mM NaF, and 1 mM Na3VO4). Extracts were cleared
by centrifugation at 14,000 x g for 15 min at 4°C.
Protein concentrations were determined using a Bio-Rad protein assay
(Richmond, CA).
EMSA was performed using the following oligonucleotides as probes and/or competitors: the oligonucleotide CIITA-GAS + E box has the sequence 5'-TGCCACTTCTGATAAAGCACGTGGTGGCCA-3' and corresponds to the type IV CIITA promoter sequence -119 to -148, the CIITA-IRF-1 oligonucleotide has the sequence 5'-TGCAGAAAGAAAGTGAAAGGGAAAAAGAAC-3' and corresponds to the type IV CIITA promoter sequence -45 to -74 (16), and the IRF-1 consensus sequence is 5'-GAAAATGAAATT-3' and was obtained from Santa Cruz Biotechnology. The mutant proximal GAS oligonucleotide (mGAS + wild-type (wt) E box) has the sequence 5'-GCAGTTGGGATGCCACcgaTcgTAAAGCACGTGGTGGCC-3', and the mutant E box oligonucleotide (wt GAS + mE box) is 5'-GGGATGCCACTTCTGATAAAGgcgGTaGTGGCCACAGTAGG-3'. Mutations are indicated by lowercase letters. 32P-labeled oligonucleotide (0.2 ng; 20,000 cpm) was incubated for 30 min at room temperature with 10 µg of nuclear extract in a volume of 20 µl containing 50 mM KCl, 2.5 mM MgCl2, 1 mM EDTA, 1 mM DTT, 10 mM Tris-Cl (pH 7.5), 12% glycerol, 1 µg of salmon sperm DNA, and 1 µg of poly(dI-dC). For supershift analysis 1 µl of Ab was incubated with the nuclear extracts at 4°C for 30 min in binding buffer, followed by an additional incubation for 30 min at room temperature with labeled oligonucleotide. For competitions, unlabeled DNA was incubated with the nuclear extracts at 4°C for 20 min before addition of labeled probe. Bound and free DNA were resolved by electrophoresis through a 6% polyacrylamide gel at 250 V in 1x TGE (50 mM Tris-Cl, 380 mM glycine, and 2 mM EDTA). Dried gels were exposed to Kodak XAR-5 film (Eastman Kodak, Rochester, NY) at -70°C with intensifying screens. Four different preparations of nuclear extracts were tested by EMSA.
Statistical analysis
Levels of significance for comparisons between samples were determined using Students t test distribution.
| Results |
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response elements in the type IV CIITA
promoter
To define the promoter elements responsible for IFN-
induction
of the CIITA gene in astrocytes, we used a CIITA wt reporter construct
in which 1703 bp of the type IV CIITA 5' region was inserted into the
pGL2-basic reporter construct. Fig. 1
depicts cytokine response
elements that have been identified through the Mat Inspector program
(38). Three clusters of GAS and IRF elements are found in the type IV
CIITA promoter. The proximal cluster is located -55 to -142 bp
upstream of the TSS (pIRF, pGAS), the medial cluster is located -591
to -683 bp (mIRF, mGAS), and the distal cluster is -769 to -854 bp
upstream of the TSS (dIRF, dGAS). An NF-
B site is located at -230
bp, a NF-GMa site is at -152 bp, and an E box element is located at
-131 bp. In addition,deletion constructs were generated from the
5' and 3' ends of the CIITA promoter, and their inducibility by IFN-
was examined (see Fig. 1
). Each of these constructs was transiently
transfected into astrocytes with a pCMV-ß-galactosidase construct to
monitor transfection efficiency. The cells were stimulated for 12
h with IFN-
, and then relative luciferase activity was determined. A
very low basal transcriptional activity of the full-length construct,
hCIITAp1.7, was detected, and a 8.3-fold induction of CIITA
promoter activity was observed upon stimulation with IFN-
(Fig. 1
).
The hCIITAp-D1 construct was tested to examine whether deletion of 683
bp upstream of the distal GAS element had any influence on IFN-
inducibility. Similar levels of IFN-
-induced luciferase
activity were observed with hCIITAp-D1 (7.7-fold induction) compared
with hCIITAp1.7. The hCIITAp-D2 construct lacks the distal and medial
GAS/IRF elements; this construct was tested to determine the
contributions of these four elements to IFN-
inducibility of the
CIITA promoter. As shown in Fig. 1
, IFN-
stimulation resulted in a
6.0-fold induction of hCIITAp-D2 promoter activity, indicating that the
distal and medial GAS/IRF elements do not contribute to IFN-
inducibility of the type IV CIITA promoter. As a further confirmation
of this finding, we analyzed the hCIITAp-D3 construct, which contains
the distal and medial GAS/IRF elements and lacks the downstream region
of the type IV CIITA promoter. The hCIITAp-D3 promoter activity was not
inducible by IFN-
treatment, further demonstrating that the distal
and medial GAS/IRF elements cannot mediate CIITA transcription in
response to IFN-
. To further define the minimal promoter elements
responsible for IFN-
activation of the CIITA promoter, three other
deletion constructs were tested; hCIITAp-D4, hCIITAp-D5, and
hCIITAp-D6. The hCIITAp-D4 lacks the NF-
B element at position -230
and contains the NF-GMa, proximal GAS, E box, and proximal IRF
elements. Upon IFN-
stimulation, a 5.3-fold induction of hCIITAp-D4
promoter activity was observed. This level of activation was not
significantly different from that of construct hCIITAp-D2, indicating
that the NF-
B element is not involved in IFN-
activation of the
CIITA promoter. Further deletion of the NF-GMa, proximal GAS, and E box
elements (construct hCIITAp-D5) lead to a small reduction in IFN-
inducibility (3.9-fold induction), while deletion of the proximal IRF-1
element in construct hCIITAp-D6 lead to a total loss of
IFN-
-inducible CIITA promoter activity (Fig. 1
). These results
collectively demonstrate that IFN-
activation of the CIITA gene in
astrocytes is dependent on elements contained within a 154-bp fragment
of the type IV CIITA promoter. Furthermore, IFN-
induction of CIITA
promoter activity is evident, although at lower levels, in the absence
of the proximal GAS and E box elements, indicating that the proximal
IRF element is capable of mediating IFN-
activation of the type IV
CIITA promoter.
Contribution of the proximal GAS element, E box element, and
proximal IRF-1 element to IFN-
induction of the type IV CIITA
promoter
The results obtained above in astrocytes differ from what has
previously been observed in melanoma cells; in that cell type, IFN-
activation of the type IV CIITA promoter was completely abolished when
the proximal GAS element was mutated, indicating a critical role for
STAT-1
in these cells (17). To further define the contribution of
the proximal GAS, E box, and proximal IRF elements in CIITA promoter
activity in astrocytes, we generated a series of type IV CIITA promoter
constructs with selective mutations in those elements individually
(GAS, E box, and IRF) or in combination (GAS + E box, and GAS + IRF;
see Fig. 2
). Mutation of the proximal GAS element results in an
approximately 55% inhibition of IFN-
-induced CIITA promoter
activity compared with that of the hCIITAp1.7 construct; however, there
is still an IFN-
stimulation index of
45% of the hCIITA-GAS
construct compared with the wt construct (Fig. 2
). Binding of STAT-1
to the proximal GAS element has been shown to require interaction with
the constitutively expressed transcription factor USF-1, which binds to
the adjacent E box (17). Thus, we next tested the influence of a
mutated E box on IFN-
inducibility of the CIITA promoter. An IFN-
stimulation index of
44% of the hCIITA-E box construct was
observed, comparable to that of the hCIITA-GAS construct (Fig. 2
).
IFN-
stimulation of the construct containing mutations in both the
proximal GAS and E box elements, hCIITA-GAS + E box, resulted in a
stimulation index value of
36% compared with wt hCIITAp1.7. Thus,
mutations in either of these elements (GAS or E box) results in a
partial inhibition of IFN-
-inducible promoter activity compared with
that of the wt construct. However, IFN-
activation is not completely
abolished, suggesting that an intact IRF element may mediate partial
IFN-
activation of the type IV CIITA promoter in astrocytes. To test
the importance of the IRF element in this response, the mutation
construct hCIITA-IRF was created. As shown in Fig. 2
, mutation of the proximal IRF element results in an almost complete
abrogation of IFN-
-inducible CIITA promoter activity. As well,
mutations in both the proximal GAS and IRF elements (hCIITA-GAS + IRF)
led to a complete loss of IFN-
inducibility (Fig. 2
). These results
demonstrate that the proximal GAS, E box, and proximal IRF elements
each play a functionally important role in IFN-
induction of
CIITA promoter activity. The proximal IRF element is capable
of mediating IFN-
inducibility of this promoter, even in the absence
of functional proximal GAS and E box elements, while the proximal GAS
and E box elements cannot mediate IFN-
inducibility in the absence
of a functional IRF element. Optimal responsiveness to IFN-
stimulation requires all three cis-acting elements.
DNA-protein complex formation over the CIITA proximal GAS and E box elements
To analyze the DNA-protein complexes forming over the proximal GAS
and E box elements of the type IV CIITA promoter, nuclear extracts were
prepared from unstimulated or IFN-
-stimulated astrocytes, and EMSA
was performed with labeled oligonucleotide spanning the proximal GAS
and E box elements. Using extracts from unstimulated cells, three
DNA-protein complexes were detected; complex 2, complex 3, and complex
4 (Fig. 3
A, lane
2). An additional complex (complex 1; a doublet with slower
electrophoretic mobility) was observed using nuclear extracts from
IFN-
-stimulated astrocytes (Fig. 3
A, lane 3).
Using an excess of unlabeled proximal GAS + E box oligonucleotide, all
four complexes from IFN-
-stimulated extracts were competed away
(Fig. 3
A, lane 4). To further investigate the
identities of complexes 14, we analyzed the DNA-protein complexes by
supershift experiments using Abs against STAT family members
(STAT-1
, STAT-3, STAT-5, and STAT-6) and USF-1. As shown in Fig. 3
A, the IFN-
-inducible complex 1 is supershifted in the
presence of STAT-1
antisera (lane 5). STAT-3,
STAT-5, or STAT-6 antiserum did not affect complex 1 formation
(lanes 68). These results indicate that the
IFN-
-induced complex 1 is composed of STAT-1
. The constitutively
present complexes 2, 3, and 4 were not influenced by the inclusion of
STAT-1
, STAT-3, STAT-5, or STAT-6 antiserum (Fig. 3
A, lanes 58). To determine whether complexes
2, 3, and 4 contain members of the USF family, polyclonal antiserum to
USF-1 was used in supershift experiments (Fig. 3
B). Nuclear
extracts from unstimulated extracts formed three complexes over the
proximal GAS + E box oligonucleotide, complexes 2, 3, and 4 (Fig. 3
B, lane 1). Inclusion of antiserum against USF-1
lead to a supershift of all three complexes (lane 3).
Upon IFN-
stimulation, complex 1 was observed (lane
4), and inclusion of USF-1 antiserum supershifted all four
complexes (lane 6). These results indicate that
complexes 1, 2, 3, and 4 all contain USF-1. It should be noted that
Muhlethaler-Mottet et al. (17) also observed multiple complexes forming
over this region of the CIITA promoter; two DNA-protein complexes from
unstimulated extracts and an additional IFN-
inducible complex
composed of a doublet. It is possible that additional proteins that
bind to STAT-1
, USF-1, or both may be contained in either of the two
IFN-
bands.
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binds to the
proximal GAS element only in the presence of constitutively expressed
USF-1, which binds to the adjacent E box element. To investigate
whether this is true for STAT-1
binding to the GAS element in
astrocytes, oligonucleotides with mutations in either the proximal GAS
element or the E box element were used as competitors in EMSA performed
with labeled proximal GAS + E box probe. As shown previously, an
excess of unlabeled proximal GAS + E box oligonucleotide competed
away complexes 2, 3, and 4 formed by nuclear extracts from unstimulated
cells (Fig. 3
-stimulated
astrocytes. Unlabeled excess proximal GAS + E box oligonucleotide
effectively competed away complexes 1, 2, 3, and 4 (compare lanes
5 and 6). The mGAS + wt E box oligonucleotide competed
out not only complexes 2, 3, and 4, which contain USF-1, but also
complex 1 containing STAT-1
(lane 7), indicating
that prevention of USF-1 binding to the E box of the labeled probe
abolished the binding of STAT-1
to the proximal GAS element. Using
the wt GAS + mE box oligonucleotide as competitor, only complex 1 was
competed away (lane 8). Collectively, these results
indicate that the binding of STAT-1
to the proximal GAS element of
the type IV CIITA promoter is dependent on that of USF-1 binding to the
E box, in agreement with the findings from Muhlethaler-Mottet et al.
(17). DNA-protein complex formation over the CIITA proximal IRF element
We next investigated the nature of the protein(s) binding the
proximal IRF element of the CIITA promoter. Extracts from unstimulated
astrocytes or astrocytes treated with IFN-
for 2 h were
incubated with a labeled oligonucleotide containing the proximal IRF
sequence. Using extracts from unstimulated cells, no DNA-protein
complexes were detected (Fig. 4
A, lane 1). A
DNA-protein complex (complex A) was observed from IFN-
-stimulated
nuclear extracts (lane 2), which was competed away
using an excess of unlabeled proximal IRF oligonucleotide
(lane 3). As well, competition with unlabeled IRF-1
consensus oligonucleotide led to near complete competition of complex A
(lane 4). The identity of complex A was analyzed by
supershift experiments using Abs against IRF-1 and IRF-2. Inclusion of
normal rabbit serum did not affect binding of complex A (Fig. 4
B, lane 4), while IRF-1 antisera caused a
supershift in complex A (lane 5). Complex A binding
was not influenced by antiserum against IRF-2 or STAT-1
(Fig. 4
B, lanes 6 and 7). These results
indicate that complex A contains the IRF-1 transcription factor.
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does not enhance IFN-
-induced CIITA promoter activity
We have previously demonstrated that TNF-
alone does not induce
class II MHC expression in astrocytes, but enhances IFN-
-induced
class II MHC gene transcription (21, 36). To determine whether the
TNF-
-enhancing effect was mediated at the level of the CIITA
gene, the effect of IFN-
, TNF-
, or both cytokines on the
transcriptional activity of the full-length type IV CIITA construct,
hCIITApl.7, was tested. As shown in Table I
, the hCIITApl.7 promoter construct was
activated in the presence of IFN-
, while TNF-
alone had no
effect. Stimulation of cells with IFN-
plus TNF-
did not activate
CIITA transcription above that observed with IFN-
alone (Table I
).
As well, there was no statistical difference between IFN-
vs IFN-
plus TNF-
activation of CIITA transcription. These results indicate
that TNF-
, either alone or in combination with IFN-
, does not
activate type IV CIITA promoter activity.
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| Discussion |
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-inducible expression of class II MHC genes
(for review, see 3). In this study we investigated the activation
of the type IV CIITA promoter in astrocytes in response to IFN-
stimulation and identified the cis-acting elements and
transcription factors involved in this response. We demonstrate that
the proximal GAS, E box, and proximal IRF elements are all required for
IFN-
induction of CIITA promoter activity in astrocytes. The
proximal IRF element was shown to be essential for IFN-
induction of
CIITA activation, while the proximal GAS and E box elements play an
important role in contributing to the maximal response of the type IV
CIITA promoter in response to IFN-
. As well, we demonstrate that
STAT-1
, USF-1, and IRF-1 bind the proximal GAS, E box, and proximal
IRF elements, respectively. The binding of STAT-1
to the proximal
GAS element is dependent on the binding of USF-1 to the adjacent E box
element, in agreement with previous findings (17).
Functional analysis of the type IV CIITA promoter was performed by
using deletion constructs and constructs containing selective mutations
in the proximal GAS, E box, and proximal IRF elements. Our results in
primary rat astrocytes indicate that a 154-bp fragment of the type IV
CIITA promoter contains all the elements necessary for responsiveness
to IFN-
(proximal GAS, E box, and proximal IRF elements; Fig. 1
).
Interestingly, deletion of the proximal GAS and E box elements results
in an approximately 53% reduction in CIITA transcription in response
to IFN-
(Fig. 1
). Mutation of the proximal GAS element also results
in an approximately 55% reduction in IFN-
-induced CIITA
transcription compared with the wt construct (Fig. 2
). Thus, these data
indicate that in the absence of a functional proximal GAS element, the
type IV CIITA promoter still maintains
45% of the inducibility by
IFN-
, which we propose is mediated by the proximal IRF element (see
below). This finding in astrocytes differs from that observed in
melanoma cells; in that cell type IFN-
-induced type IV CIITA
promoter activity was almost completely abrogated when the proximal GAS
element was mutated (17).
Our results also indicate an involvement of the E box in
IFN-
-induced CIITA expression. Using the construct hCIITA-E box,
which contains a mutation in the E box, IFN-
induction of CIITA
promoter activity was inhibited by
56% compared with that of the wt
promoter (Fig. 2
). This extent of inhibition is similar to that seen
using construct hCIITA-GAS, which contains a mutated GAS element (Fig. 2
). STAT-1
has been shown to bind to the proximal GAS element of the
type IV CIITA promoter only in the presence of USF-1, which binds to
the adjacent E box (17). We have observed the same in astrocytes, as
determined by EMSA. Thus, in the construct hCIITA-E box, the mutation
in the E box prevents USF-1 binding, which, in turn, inhibits STAT-1
binding to the proximal GAS element. This results in a reduction of
IFN-
-inducible CIITA promoter activity. Indeed, double mutation
of both the proximal GAS and E box elements does not result in a
significantly greater extent of inhibition (
64%) compared with
individual mutations in each of the elements (Fig. 2
). This indicates
that the GAS/E box sites function as a single, integrated
cis-regulatory element and are responsible in part for
IFN-
induction of type IV CIITA promoter activity.
The critical role of the proximal IRF element in IFN-
induction of
type IV CIITA promoter activity was determined using the
deletion/mutant CIITA promoter constructs. First, the deletion
construct containing only the proximal IRF element (hCIITAp-D5)
maintained
47% inducibility by IFN-
compared with the wt
construct (Fig. 1
). Construct hCIITA-D6, which lacks the proximal IRF
element, had no response to IFN-
(Fig. 1
). Moreover, mutation of the
IRF element alone in the context of the full-length CIITA promoter
resulted in an almost complete loss of IFN-
inducibility (Fig. 2
).
Collectively, these results indicate that the proximal IRF element is
obligatory in mediating IFN-
induction of CIITA expression in
astrocytes. This finding is in agreement with previous observations
that IRF-1 is essential for IFN-
-induced CIITA and class II MHC
expression (17, 39, 40). In those studies, cells from IRF-1-deficient
mice showed a lack of IFN-
-inducible CIITA and class II MHC
expression. In addition, STAT-1
has been shown to be essential for
IFN-
-induced CIITA and class II MHC gene expression. CIITA and class
II MHC mRNA expression is not inducible by IFN-
in bone marrow
macrophages from STAT-1
-deficient mice (41). We have previously
shown that treatment of cells with STAT-1
antisense oligonucleotides
reduces STAT-1
protein expression, leading to a reduction in
CIITA and class II MHC expression in response to IFN-
(12). We
have also conducted experiments on astrocytes from STAT-1
-deficient
mice, and these cells cannot be induced to express class II MHC in
response to IFN-
(E. N. Benveniste, unpublished observation).
Our results in the astrocytes indicate that the binding of STAT-1
to
the proximal GAS element is not obligatory for IFN-
-induced type IV
CIITA promoter activity. However, since STAT-1
is required for
IFN-
induction of IRF-1 gene expression (42, 43), this explains the
absolute need for STAT-1
in the overall IFN-
induction of CIITA
and class II MHC expression.
Although a limited number of cell types have been examined for
IFN-
-induced CIITA transcription (melanoma cells and astrocytes),
the differences in the absolute requirement for STAT-1
and IRF-1 may
explain the conflicting results regarding the need for protein
synthesis for optimal CIITA expression. In HeLa cells, IFN-
induction of CIITA gene expression does not require new protein
synthesis (11), while in THP-1 monocytic cells, human astroglioma
cells, and astrocytes, a partial sensitivity of IFN-
-induced CIITA
expression to cycloheximide treatment is observed (10, 12) (data not
shown). In some cell types (i.e., HeLa cells), STAT-1
and USF-1,
which are constitutively present in the cell, may be sufficient for
CIITA expression; thus, there is no requirement for the synthesis of
IRF-1. In cell types such as the astrocyte, the requirement for IRF-1
in addition to STAT-1
and USF-1 may reflect the need for protein
synthesis for optimal CIITA expression. Examination of other cell types
will further our understanding of the molecular basis of CIITA
expression in different tissues.
We have made the observation that in astrocytes TNF-
alone has no
effect on class II MHC expression, but enhances IFN-
-induced class
II mRNA and protein expression (21, 44). TNF-
functions by enhancing
the rate of IFN-
-induced class II transcription (45). TNF-
treatment of astrocytes, in the presence of IFN-
, leads to the
induction of a protein, TNF-
-induced complex X, that binds to the X2
box of the class II promoter (36); however, we do not know whether
expression of TNF-
-induced complex X is responsible for the TNF-
enhancement of class II MHC expression. We wished to determine whether
the TNF-
-enhancing effect on IFN-
-induced class II MHC
transcription could be due in part to enhancement of CIITA
transcription. Our results indicated that TNF-
alone had no effect
on type IV CIITA promoter activity, nor did TNF-
enhance
IFN-
-induced CIITA activation (Table I
). TNF-
mediates many of
its functional effects through activation of NF-
B, and we have
previously shown that TNF-
activates p65 homodimers and p65/p50
heterodimers in primary rat astrocytes (46). However, although the
human type IV CIITA promoter contains an NF-
B element that could
mediate the TNF-
effect, TNF-
has no influence on CIITA promoter
activity, either alone or in the presence of IFN-
. Thus, the ability
of TNF-
to enhance IFN-
-induced class II MHC transcription occur
at a step distal to CIITA transcription.
This study has examined the mechanism by which IFN-
induces CIITA
gene expression in primary rat astrocytes, which is critical for
subsequent class II MHC expression. As mentioned previously, the role
of the class II MHC-positive astrocyte as an APC within the CNS is
still unresolved, with some groups reporting activation of Th1 and Th2
function, while others have demonstrated a suppressive and/or apoptotic
signal to T cells (27, 28, 29, 32). If class II MHC-positive astrocytes do
promote activation of Th2 cells and secretion of IL-4 and IL-10 (28),
this could be viewed as beneficial due to the immunoprotective effects
of IL-4 and IL-10 within the CNS (47, 48, 49). Transmission of an apoptotic
signal to autoreactive T cells by class II MHC-positive astrocytes
could also be beneficial in inhibiting aberrant immune responses within
the CNS. Understanding the molecular basis of IFN-
- induced
CIITA expression and subsequent class II expression in astrocytes may
aid in the regulation of inflammatory responses in the CNS.
| Acknowledgments |
|---|
| Footnotes |
|---|
2 Address correspondence and reprint requests to Dr. Etty N. Benveniste, Department of Cell Biology, Room 350 MCLM, University of Alabama, Birmingham, AL 35294-0005. E-mail address: ![]()
3 Abbreviations used in this paper: MS, multiple sclerosis; CIITA, class II transactivator; GAS, IFN-
activation sequence; IRF-1, IFN regulatory factor-1; CNS, central nervous system; TSS, transcription start site; EMSA, electrophoretic mobility shift assay; wt, wild type; mE box, mutant E box; RLA, relative luciferase activity; USF-1, upstream stimulating factor-1. ![]()
Received for publication October 6, 1998. Accepted for publication January 25, 1999.
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