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*
Centre dImmunologie, Institut National de la Santé et de la Recherche Médicale (INSERM)/Centre National de la Recherche Scientifique (CNRS) de Marseille-Luminy, Marseille, France;
Unité de Biologie Moléculaire du Gène, Institut Pasteur, Paris, France;
Institut Universitaire de France; and
§
Laboratoire de Biologie des Tuneurs, Institut Paoli-Calmettes, Marseille, France
| Abstract |
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| Introduction |
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, TGF-ß1, TNF-
,
IL-1ß, IL-10, granulocyte-CSF, granulocyte/macrophage-CSF, and
CC-chemokines, such as RANTES, macrophage inflammatory
protein (MIP)-1
, and MIP-1ß (2, 3, 4, 5, 6). Lysis of target cells and
cytokine production by NK cells result from a balance between the
action of inhibitory and activating receptors expressed at their
surface. Interaction between MHC class I molecules on target cells and MHC class I receptors expressed on NK cells can block NK cell cytolytic activity. The NK inhibitory receptors for MHC class I molecules are well characterized. They belong to the Ig superfamily (KIRs killer cell Ig-like receptors) and to the lectin-like superfamily (CD94/NKG2 heterodimers) in humans (7, 8, 9). Despite their structural heterogeneity, these receptors use a common inhibitory mechanism (10, 11, 12). Both the Ig-like and the lectin-like inhibitory receptors contain one or two immunoreceptor tyrosine-based inhibitory motifs (ITIMs)3 in their intracytoplasmic portion (11). Upon receptor engagement, the tyrosine residue in ITIMs is phosphorylated and recruits the tandem src homology domain 2 (SH2)-containing protein tyrosine phosphatases SHP1 and/or SHP2, which are responsible for the inhibition of NK cell activity (13, 14, 15, 16, 17).
Knowledge of NK cell surface receptors involved in the activation of
natural cytotoxicity is emerging. It is likely that an array of
triggering receptors, including p46, p44, DNAM-1, B7 ligands as well as
CD2, ß2-integrins, NKRP-1, and CD44 are involved
in natural cytotoxicity, depending upon NK cell activation state and
upon the availability of the relevant ligand on target cells (18, 19, 20, 21, 22).
Moreover, subsets of NK cells express at their surface activating
isoforms of killer cell Ig-like receptor and CD94/NKG2 heterodimers (7, 23). These activating molecules lack ITIMs in their intracellular
portion and present a charged amino acid in their transmembrane portion
(11, 24). These receptors are noncovalently associated with an
ITAM-bearing polypeptide, KARAP/DAP-12, expressed as homodimers
and responsible for transducing activating signals upon receptor
triggering (25, 26, 27, 28, 29). Consistent with the association of CD3
,
Fc
RI
, or KARAP/DAP-12 with a variety of activating receptors,
including p46 and p44 (18, 19), it has been shown that the early phase
of natural cytotoxicity requires protein tyrosine kinase (PTK)
activation (30). However, the precise cascade of biochemical events
involved in natural cytotoxicity is not yet elucidated.
To dissect the mechanisms involved in natural cytotoxicity, we compared the transcription patterns of the human NK cell line NKL when interacting with the sensitive target cell line C1R or with resistant C1R-HLA-B27 (C1R-B27) transfectants. In this complex biological system, the large number of genes that are involved, together with the fact that different genes become critical at different times, requires experimental techniques able to examine the expression levels of many genes simultaneously. Array hybridization methods provide this possibility; we used the flexible "multiplex messenger assay" (MMA), in which genes are represented by IMAGE cDNA inserts arrayed on nylon membranes and hybridized with complex radioactive probes prepared from relatively small amounts of total RNA (31, 32, 33). We observed that members of the AP-1 transcription factor complex are produced during early stages of natural cytotoxicity and that engagement of MHC class I inhibitory receptors impairs the transcription of AP-1 genes and DNA binding of Jun-Fos heterodimers.
| Materials and Methods |
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The following cell lines have been described previously: the IL-2-dependent human NK cell line NKL (34), the human B-LCL cell line C1R, and its stable HLA-B27 transfectant (C1R-B27) (35). The mitogen-activated protein kinase (MAPK) inhibitor PD098059 was purchased from New England Biolabs (Beverly, MA). The transcription inhibitor actinomycin D (ActD) was purchased from Sigma (St. Louis, MO).
Cytotoxicity assays
The cytolytic activity of NKL cells was assessed against C1R and C1R-B27 cell lines. Briefly, 5 x 10351Cr-labeled target cells were added to serial dilutions of NKL cells at the initiation of a 51Cr-release assay. After the indicated period of time, 100 µl of supernatant was collected, and radioactivity was measured in a gamma counter for the determination of 51Cr release and percentage of specific lysis.
For the experiments with ActD and PD098059, NKL were preincubated for 3 h (ActD) and 1 h (PD098059) at 37°C. Cell viability was assessed by trypan blue exclusion.
Selection of cDNA clones corresponding to known genes
The complete set of genes and the corresponding IMAGE cDNA clones used in these experiments are displayed at our Web site (http://tagc.univ-mrs.fr/). cDNA clones corresponding to the 3' portion of their mRNA were identified using the EST database (dbEST release 091495) from the National Center for Biotechnology Information (Bethesda, MD) via the World Wide Web (http://www.ncbi.nlm.nih.gov) and obtained through the Integrated Molecular Analysis of Genomes and Their Expression (IMAGE) Consortium. The clones to be used were then selected from libraries constructed by B. Soares according to the following criteria: pT7T3D (with a modified polylinker) cloning vector, Escherichia coli DH10B host bacteria, an insert size of approximately 1 kb, and no detectable repeat sequences. All clones were provided by the Human Genome Mapping Project Resource Centre (Hinxton, U.K.). Their identities were checked by vector-PCR amplification of the inserts with T7 and T3 primers and comparison with the size recorded in dbEST; only clones displaying a single PCR product of the expected size were used. Some clones were further checked by 5' tag sequencing. Four negative controls were included: three poly(A) sequences (50, 60, and 90 bp long) and the cloning vector pT7T3D without insert. A plant gene, the Arabidopsis thaliana cytochrome c554 gene, was used to normalize different hybridizations. Membranes on which vector-PCR amplification products had been spotted were used. For this set of genes, the cDNA to be arrayed were first amplified in three 96-well microtiter plates using a vector-PCR amplification with T7 and T3 primers (T7 primer, 5'-ATTATGCTGAGTGATATCCCT-3'; T3 primer, 5'-TCCCTTTAGTGAGGGTTAAT-3'), the 4th plate containing, in all wells, the PCR-products of the A. thaliana cytochrome c554 gene.
Design of the experiment for quantitative differential screening and preparation of MMA membranes
Membranes were spotted using a commercial robotic device (PBA) and a 96-pin tool depositing approximately 50 nl of solution per spot (0.6 pmol/µl). Before gridding, Hybond-N+ 8 x 12-cm membranes (Amersham Pharmacia Biotech, Uppsala, Sweden) were positioned on Whatman 3 MM paper saturated with denaturing solution (1.5 M NaCl, 0.5 M NaOH). Following gridding, membranes were transferred to a sheet of dry Whatman 3 MM paper and air dried for 2 h. Membranes were then processed though the following stages: 5 min on a sheet of 1.5 M NaCl, 0.5 M NaOH-saturated Whatman 3 MM paper; and 1 min on each of 3 sheets of 1.5 M NaCl, 0.5 M Tris-HCl (pH 7.2), 1 mM EDTA-saturated Whatman 3 MM paper. Membranes were then transferred to a sheet of Whatman 3 MM paper and air dried for 2 h. Finally, a UV treatment (254 mµ, 70 mJ/cm2) was performed to cross-link DNA to the membrane.
Oligonucleotide probe labeling and vector hybridization conditions
In spite of adjustment of DNA concentrations, the exact amount
of DNA on the membrane does vary somewhat from spot to spot and from
membrane to membrane and must be measured to obtain meaningful results.
An oligonucleotide corresponding to a sequence present in all amplified
segments was used for this normalization, with the following sequence:
5'-GGGAATTTGGCCCTCGAGGCCAA-3'. One µg of oligonucleotide was labeled
with (
-33P)ATP using standard methods (36). Membranes
were prehybridized for 3 h at 42°C in 6x standard
sodium citrate (SSC), 5x Denhardts reagent, 1% SDS, and 100
µg/ml sonicated salmon sperm DNA and then hybridized with labeled
oligonucleotide (at 105 cpm/ml) and unlabeled
oligonucleotide (at 100 ng/ml) overnight. Filters were washed twice in
2x SSC, 0.1% SDS for 15 min at room temperature and then exposed with
phosphor screens.
Preparation and labeling of complex probes from total RNA and hybridization conditions
Total RNA was isolated from cell lines using the "Trizol" reagent (Life Technologies Cergy-Pontoise, France). Complex probes were prepared from total RNA (5 µg) as previously described with an excess of oligo(dT) (25) to saturate the poly(A) tails and ensure that the reverse transcribed product does not contain long poly(T) sequences (31). A constant amount of RNA (1 ng) transcribed in vitro from cytochrome c554 DNA was added to the total RNA before 33P complex probe preparation to standardize hybridization intensities between different experiments. Filters were prehybridized and hybridized for 20 and 40 h respectively in 10 ml of hybridization mix. After hybridization, filters were washed in 0.1x SSC, and 0.1% SDS twice for 2 h at 68°C and then exposed to phosphor screens for 5 days. Before complex probe hybridization, membranes were hybridized with oligonucleotide probe, quantified, then gently stripped as previously described (31). Membranes were normally used for two such cycles.
Detection and quantification of hybridization signals
Detection and quantification of hybridization signals and normalization of hybridization intensities were done as described previously (37) except for the "vertical normalization" that was performed to allow comparison of different complex probe hybridizations, dividing for each clone the "horizontally normalized intensity" by the mean of the 192 intensities of the control clone c554.
Northern blot analysis and quantification
Total cellular RNA (10 µg) extracted from cells grown in culture were size fractionated in 1.2% agarose gels containing 3.7% formaldehyde and blotted to positively charged nylon membranes (Sure Blot hybridization membranes from Oncor). Prehybridization and hybridization were performed according to the manufacturers instructions, with cDNA probes specific for human junB, c-jun, and GAPDH. cDNA were labeled by random priming (38) and added to the hybridization mix at 106 cpm/ml. Northern blots were exposed to an imaging plate.
RT-PCR analysis
Total RNA was isolated from cell lines using the "Trizol"
reagent (Life Technologies). Five micrograms of total RNA were reverse
transcribed using oligo(dT) primers and Superscript reverse
transcriptase according to the manufacturers instructions. Three
percent of cDNA was then subjected to 2530 cycles of PCR in a
Perkin-Elmer thermocyler 9600 using human specific primers
pairs (Table I
). Three microliters of diluted
first-strand cDNA were mixed with 2 µl 10x PCR buffer (200 mM
Tris-HCl pH 8.4, 500 mM KCl), 1 µl 50 mM MgCl2, 1 µl
each of 50 pM sense and antisense primers, 2 µl 10 mM dNTP, and 1
unit Taq DNA polymerase (Life Technologies) in a final
20-µl reaction volume. Amplification conditions were 94°C for 5 min
plus 2530 cycles with 94°C for 40 s, annealing temperature
(Table I
) for 40 s, 72°C for 40 s, and a final extension of
72°C for 10 min. Fifty percent of each PCR reaction was
electrophoresed on 2% agarose gels.
|
Nuclear extracts from NKL incubated with C1R or C1R-B27 for 0 h, 1 h, 2 h, or 4 h were prepared as described (39). Protein concentrations in the extracts were determined by the Bradford assay (Bio-Rad protein assay; Bio-Rad, Richmond, CA). Three micrograms of nuclear extract were used for EMSA of AP-1 oligonucleotides. The consensus AP-1 oligonucleotide 5'-CGCTTGATGACTCAGCCGGAA-3' was purchased from Santa Cruz Biotechnology (Santa Cruz, CA). Binding assays were conducted by incubating the labeled DNA (50,000 cpm.) with 3 µg of nuclear proteins and 1 µg of poly(dI-C) in a buffer containing 10 mM HEPES, 50 mM KCL, 0.1 mM EDTA, 5 mM MgCl2, 10% glycerol, 1 mM DTT, and 0.1% Nonidet P-40. After 30 min on ice, the reaction mixtures were loaded onto a 4% polyacrylamide gel in 0.25x TBE buffer and electrophoresed. Gels were dried and exposed to a Fuji RX film overnight. For competition, Abs or a 50-fold molar excess of unlabeled oligonucleotide was added to the reaction mixture 30 min before the addition of labeled DNA. Anti-Fos (reactive with c-Fos, FosB, Fra-1, and Fra-2), anti-Jun (reactive with c-Jun, JunB, and JunD), anti-c-Jun, anti-JunB, and anti-JunD were purchased from Santa Cruz Biotechnology.
| Results |
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NKL cells are able to efficiently lyse the B cell line C1R, whereas transfection of C1R cells with HLA-B27 allele confers C1R-B27 cells protection from NKL-mediated lysis (40, 41). The inhibition of NKL cytolytic activity against C1R-B27 target cells is due to the expression of the ITIM-bearing molecule ILT-2 at the surface of NKL cells (40). NKL cytotoxicity is a rapid phenomenon, since target cell lysis is already detectable after 1 h of contact between effector and target cells and increases with time (data not shown). We used this in vitro model to determine whether NK-mediated cytolytic activity is correlated with gene transcription.
To identify the genes whose transcription is involved in natural
cytotoxicity, an MMA profiling experiment was performed on a set of 120
human known genes. Complex probes were prepared from total RNA of NKL
cells incubated with C1R for 0 h and 2 h, and NKL cells
incubated with C1R-B27 for 2 h (Fig. 1
B). Control vector hybridizations were
performed as described in Materials and Methods (Fig. 1
A). Reproducible changes in expression levels were observed
for two genes, JunB and CD69, that both showed a 100200% increase
when NKL were in the presence of C1R for 2 h (Fig. 1
C).
In both cases, this increase did not occur when NKL were confronted
with the resistant C1R-B27 target cells. Expression levels for other
genes included in the set, e.g., other costimulatory molecules
CD2 and CD11a or other early genes such as
myb and myc, showed either no alteration
or only marginal, irreproducible changes and were not investigated
further. Since CD69 is a well-known marker of NK cell activation, the
accumulation of CD69 mRNA during the course of natural cytotoxicity was
used as a positive control in our analysis (42). We focused our
attention on the variations observed for the JunB transcription factor
and on its potential involvement in NK cell cytotoxicity.
|
The JunB protein associates with various Fos family members to
form functional AP-1 transcription factors (43). mRNA rates of members
of Jun and Fos families were thus assessed by Northern blotting for
c-Jun and JunB genes, and by RT-PCR for
c-Fos, FosB, Fra1, and Fra2
genes. The differential expression of JunB previously detected by MMA
was confirmed (Fig. 2
A). We also detected a
small increase of c-Jun mRNA levels during activation of natural
cytotoxicity (Fig. 2
A), whereas the rate of JunD mRNA is
unchanged in all the conditions tested (data not shown). Among members
of Fos family, only c-Fos and FosB mRNA accumulated during lysis of
target cells (Fig. 2
B). In all cases, mRNA rates found for
NKL incubated with C1R-B27 target cells remained at the level found
with NKL alone. These results indicate that the increases observed when
NKL cells interact with C1R targets are specifically correlated with
natural cytotoxicity programs and are abrogated by the engagement of
inhibitory MHC class I receptors. To insure that the modulation of AP-1
factors did occur in the effector cells, NKL cells were pretreated for
3 h with ActD, an inhibitor of transcription. Results in Fig. 2
C show that ActD pretreatment severely impairs the
accumulation of JunB, c-Fos, and FosB transcripts detected when NKL
cells encounter the sensitive C1R cell line. In addition, actinomycin
pretreatment of NKL cells inhibits their natural cytotoxicity toward
C1R (Fig. 2
D). By contrast, actinomycin pretreatment of C1R
cells does not alter their sensitivity toward NKL-induced natural
cytotoxicity (Fig. 2
D). Together these results indicate that
the regulation of AP-1 transcription factors occurs in NKL cells.
|
Further analysis of the involvement of AP-1 transcription factors
in natural cytotoxicity was investigated by measuring the DNA binding
activity of AP-1 polypeptides present in protein extracts prepared from
NKL cells alone as compared with protein extracts prepared from NKL
cells incubated with C1R or C1R-B27 targets. EMSA revealed that protein
extracts from NKL cells alone or from NKL cells incubated with the
resistant C1R-B27 targets bound the AP-1 oligonucleotide and displayed
by EMSA a retarded band representative of the basal AP-1 level in
unstimulated NKL cells (Fig. 3
A, lanes
0a, 1b, 2b, and 4b). In contrast, protein extracts
prepared from NKL cells incubated with C1R targets bind the AP-1
oligonucleotide with two different electrophoretic mobility bands (Fig. 3
A, lanes 1a, 2a, and 4a). The
appearance of the upper band correlates with the
course of natural cytotoxicity, since this low-mobility band appears at
1 h of incubation with target cells and increases until 4 h.
|
Based on these results, we used a pharmacological approach to further
analyze the involvement of AP-1 transcription factors in NKL natural
cytotoxicity. NKL were pretreated with the MEK inhibitor PD098059,
which interferes with the MAPK-dependent transcription of AP-1
complexes. As shown in Fig. 4
, a decrease of NKL natural
cytotoxicity was observed upon treatment with the MAPK inhibitor
PD098059. Therefore, the pharmacological approach is in agreement with
our MMA findings, as well as with previous pharmacological studies
(44), and supports the involvement of the MEK-dependent AP-1 pathway in
NKL cytotoxicity programs.
|
| Discussion |
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AP-1 transcription factors consist of a complex combination of various members of the Fos (c-Fos, FosB, Fra1, Fra2) and Jun (c-Jun, JunB, and JunD) families of proteins (43). Each of these proteins contains a leucine zipper domain that allows the association with other members of the Fos-Jun family. Although homodimers of Jun, but not of Fos, bind to TPA-responsive elements (TRE), the DNA-binding affinity and the transcriptional activity is notably higher for Jun:Fos heterodimers. AP-1 transcriptional activity is therefore regulated by 1) the regulation of Fos and Jun gene expression, 2) the combination of proteins that form AP-1 homo- or heterodimers, and 3) the posttranslational modification of both preexisting and newly synthesized Jun and Fos protein, which occurs mainly by phosphorylation. Our results show that, in the absence of target cells or in the presence of HLA Class I+ target cells resistant to natural cytotoxicity, NKL cells express Jun:Jun homodimers. By contrast, in the presence of target cells sensitive to natural cytotoxicity, Jun:Fos heterodimers are detected in addition to Jun:Jun homodimers. Therefore, engagement of natural cytotoxicity programs correlates with the formation of Jun:Fos heterodimers.
The transcriptional regulation of Fos and Jun
genes depends upon the activation of MAPK-dependent pathways (46). Two
categories of MAPK, the extracellular regulatory kinases (ERK) and the
c-Jun N-terminal kinase (JNK), are involved in c-Fos transcription
(47), whereas c-Jun transcription depends only upon JNK (48). PD098059
was initially identified to inhibit the activity of MEK1, which acts
upstream of ERKs, but not the activity of SEK, a MAPK
kinase homologue that participates to JNK activation. In
addition, PD098059 does not alter the function of Raf, which acts
upstream of MEK1 (49, 50). Using PD098059, we show that activation of
MAPK is necessary for NKL natural cytotoxicity toward C1R cells (Fig. 4
). Our data are consistent with the inhibition induced by PD098059 on
natural cytotoxicity exerted by another human IL-2 dependent NK cell
line, YT, as well as by freshly isolated NK cells toward Raji or K562
cells (51). Similarly, CD16-induction of c-Fos mRNA in NK cells (44),
as well as rADCC, are inhibited by PD098059 treatment (data not
shown). These results underscore the role of MAPK as signal-transducing
molecules that govern NK cell activation programs. The correlation
between the inhibitory effect of PD098059, as well as mRNA
accumulation, and the DNA-binding activity of AP-1 factors strongly
supports the involvement of AP-1 complexes in natural cytotoxicity
programs. Further, the increase in JunB mRNA and the
emergence of JunB:Fos heterodimers during natural cytotoxicity are
consistent with the involvement of ERKs (52), but not JNK (53), in the
regulation of JunB gene transcription. The correlation
between the extinction of cytotoxicity and the absence of
JunB, c-Fos, and FosB gene
up-regulation observed when NKL encounter C1R-B27 cells is further
exemplified by the absence of JunB, c-Fos, and
FosB expression in anergic CD4+ T cells (54).
Taken together, our results suggest that AP-1 transcription factors
play a role in NK cell cytotoxicity in addition to their broad
involvement in the regulation of lymphocytes, monocytes, and mast cell
activation programs (55).
| Acknowledgments |
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| Footnotes |
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2 Address correspondence and reprint requests to Dr. Eric Vivier, Centre dImmunologie INSERM/CNRS de Marseille-Luminy, Case 906, 13288 Marseille cedex 09, France. E-mail address: ![]()
3 Abbreviations used in this paper: ITIM, immunoreceptor tyrosine-based inhibition motif; EMSA, electrophoretic mobility shift assay; MMA, multiplex messenger assay; GAPDH, glyceraldehyde-3-phosphate dehydrogenase; ActD, actinomycin D; AP-1, activator protein-1; MAP, mitogen-activated protein; MAPK, MAP kinase; MEK, MAP kinase kinase; ERK, extracellular regulatory kinase; JNK, c-Jun N-terminal kinase. ![]()
Received for publication August 19, 1998. Accepted for publication January 4, 1999.
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B activation in natural killer cells. Immunology 90:455.[Medline]
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