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The Journal of Immunology, 1999, 162: 2291-2298.
Copyright © 1999 by The American Association of Immunologists

Bacterial DNA Containing CpG Motifs Stimulates Lymphocyte-Dependent Protection of Mice Against Lethal Infection with Intracellular Bacteria1

Karen L. Elkins2,*, Tonya R. Rhinehart-Jones*, Scott Stibitz{dagger}, Jacqueline S. Conover{ddagger} and Dennis M. Klinman{ddagger}

* Laboratory of Mycobacteria, Division of Bacterial Products, {dagger} Laboratory of Enteric and Sexually Transmitted Diseases, Division of Bacterial Products, and {ddagger} Retroviral Immunology Section, Laboratory of Retrovirology, Division of Viral Products, Center for Biologics Evaluation and Research, Rockville, MD 20852


    Abstract
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
Bacterial DNA containing unmethylated CpG motifs activates mammalian lymphocytes and macrophages to produce cytokines and polyclonal Ig. These include IFN-{gamma}, IL-12, TNF-{alpha}, and IL-6, which are important in the control of intracellular bacterial infection. Here, we show that bacterial DNA, as well as synthetic oligonucleotides containing CpG motifs, induce protection against large lethal doses of Francisella tularensis live vaccine strain (LVS) and Listeria monocytogenes. Methylation of DNA at CpG dinucleotides or inversion of the motif abolished this protection. Surprisingly, DNA-mediated protection was highly dependent on lymphocytes, particularly B cells, as well as the production of IFN-{gamma}. Optimal protection was elicited 2–3 days after inoculation with DNA and persisted for up to 2 wk. Further, animals surviving lethal challenge developed pathogen-specific secondary immunity. These findings indicate that host innate immune responses to bacterial DNA may contribute to the induction of protective immunity to bacteria and the subsequent development of memory.


    Introduction
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
Recent studies indicate that the mammalian immune system is stimulated by DNA containing six base pair motifs consisting of an unmethylated CpG dinucleotide flanked by two 5'-purines and two 3'-pyrimidines (reviewed in Refs. 1 and 2). Due to a combination of CpG suppression and CpG methylation, these sequence motifs are rarely present in eukaryotic but are common in prokaryotic genomes. Bacterial DNA and synthetic oligonucleotides that express these CpG motifs rapidly stimulate B cells, T cells, and macrophages to proliferate, secrete Abs, and/or produce a variety of Th1-associated immunomodulatory cytokines, including IFN-{gamma}, IL-12, IL-6, IL-18, and TNF-{alpha} 3, 4, 5, 6, 7 . Further, CpG motifs may facilitate the development of Ag-specific immunity by initiating an innate, Ag-nonspecific inflammatory response at the site of vaccination 8, 9 .

The rapid induction of an innate immune response, including the production of Th1-related cytokines, is critical in controlling the early spread of intracellular pathogens. Nonspecific bacterial stimulation of NK cells and macrophages induces production of IFN-{gamma}, TNF-{alpha}, and IL-12 10, 11, 12, 13, 14 , providing early resistance to infection with intracellular bacteria such as Listeria monocytogenes 14 , Francisella tularensis 15 , and mycobacteria 16 . This innate, lymphocyte-independent immune response apparently permits time for the development of a specific, T cell-dependent immune response that ultimately controls infection and clears the pathogen. In addition to traditional innate immunity, we recently described a second type of nonspecific innate protective immunity that is dependent on lymphocytes. Normal mice, but not lymphocyte-deficient scid mice or B cell knockout (KO)3 mice, given a sublethal infection with F. tularensis live vaccine strain (LVS) survive a strong lethal challenge with LVS given only 2–3 days later 17, 18 . F. tularensis is a highly virulent pathogen in humans, and the LVS strain of F. tularensis, while attenuated for people, retains full virulence for rodents; murine infection in LVS is histopathologically quite similar to that in humans 19 . Thus, this bacterium has been studied as a model intracellular pathogen 20, 21, 22 . Early protection, which is also demonstrable in L. monocytogenes infection in mice 23 , is nonspecific and requires IFN-{gamma} and lymphocytes, particularly B cells. However, the bacterial determinants that stimulate either inflammatory or lymphocyte-dependent innate immune responses are poorly understood.

Recognizing that the cell types and cytokines important in an early protective immune response to LVS and L. monocytogenes were the same as those stimulated by bacterial DNA, we hypothesized that host recognition of bacterial DNA containing CpG motifs contributes significantly to the stimulation of innate protective immunity. Here, we show that treatment of mice with either bacterial chromosomal DNA or oligonucleotide DNA, containing unmethylated CpG motifs that stimulate Th1-associated cytokine production, induces lymphocyte-dependent protection against lethal challenge with virulent F. tularensis and L. monocytogenes.


    Materials and Methods
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
Bacteria and growth conditions

F. tularensis LVS (ATCC 29684; American Type Culture Collection, Manassas, VA) was cultured on a modified Mueller-Hinton (MH) agar plate or in modified MH broth (Difco Laboratories, Detroit, MI) as previously described 17, 21, 24 . L. monocytogenes strain EGD (ATCC 15313) was a gift from Dr. William Schwan (Pathogenesis) and was cultured in brain-heart infusion broth or plates (Difco). Aliquots (1 ml) of bacteria were frozen in broth alone at -70°C, periodically thawed for use, and viable bacteria were quantified by plating serial dilutions on MH agar plates.

Animals

Specific pathogen-free, male BALB/cByJ mice were purchased from The Jackson Laboratory (Bar Harbor, ME) and were used at 6–16 wk of age. Male BALB/c.scid mice, as well as Igh6- (B cell KO) and GKO (IFN-{gamma} KO) mice on a C57BL/6J background, were also purchased from The Jackson Laboratory. Male BALB/c-nu/+, BALB/c.nu/nu, C3H/HeN, and C3H/HeJ mice were purchased from the Biological Resources Branch, Frederick Cancer Research and Development Center, National Cancer Institute (Frederick, MD). All mice were housed in sterile microisolator cages in a barrier environment in the CBER specific pathogen-free animal facility. All materials used in mouse inoculations, including bacteria, were diluted in PBS (BioWhittaker, Walkersville, MD) containing <0.1 ng/ml of endotoxin. Mean time to death (MTD) was calculated by arithmetic mean ± SD for all mice within a group that died; surviving mice were not included in this calculation. The statistical significance of differences in MTD were assessed using Student’s t test. Experiments enumerating numbers of CFUs in organs of various mice were performed as follows: Mice were treated and infected as indicated, and spleens, livers, lungs, and peritoneal cells (using 7–8 ml of PBS to lavage the peritoneal cavity) were removed aseptically. The organs were emulsified in a Stomacher (Seward, London, U.K.) in 5–10 ml of sterile PBS, and appropriate dilutions of organ homogenates or peritoneal cells were plated on MH plates. Results are expressed as the mean ± the SD of the mean for groups of three to four mice.

Bacterial DNA preparations

Bacterial DNA was prepared from late log phase cultures of LVS as previously described 25 . Briefly, bacteria were frozen and thawed repeatedly, then treated with 200 µg/ml of RNase, 10 mg/ml of lysozyme (in 50 mM Tris (pH 8.0) and 1 mM EDTA), 20 mg/ml of proteinase K, and 10% sarcosyl. After 1 h at 37°C, when bacterial lysis was visible, DNA was recovered through repeated extraction with phenol-chloroform-isoamyl alcohol and then precipitated with sodium acetate and ethanol. Alternatively, bacteria were treated and lysed as described and applied to a cesium chloride gradient. After centrifugation, the genomic DNA band was recovered and dialyzed exhaustively against low-endotoxin Tris-EDTA (pH 8.0) and then low-endotoxin PBS. All DNA preparations were cut with EcoRI for verification of a characteristic banding pattern on agarose gels and were tested for endotoxin content by chromogenic Limulus amebocyte lysate (LAL) assay (through the courtesy of Dr. Donald Hochstein, Division of Product Quality Control, Center for Biologics Evaluation and Research (CBER), Food and Drug Administration (FDA)) and for protein content using the Pierce (Rockford, IL) bicinchoninic acid (BCA) protein assay kit. LAL activity was always 1 pg/µg of DNA or less, and protein was always 10 ng/µg DNA or less. As indicated, DNA preparations were treated with either SssI CpG methylase (New England Biolabs, Boston, MA) according to package insert instructions. Successful methylation of cytosine residues within the dinucleotide sequence 5'... CG... 3' was confirmed by attempting to digest methylated DNA with the restriction enzyme HpaI, which cuts only at unmethylated CpG dinucleotides, and with its isoschizomer MspI, which can cut DNA when the C residue of a CpG dinucleotide is methylated. Male human placental (HP) DNA was purchased from Sigma (St. Louis, MO). Oligonucleotides were synthesized in the CBER core facility and tested upon reconstitution for endotoxin as above; all contained <0.1 EU/ml at a concentration of 1 mg/ml or greater. The sequences of the oligonucleotides used were: #1 (see 26 , TCT CCC AGC GTG CGC CAT; Me-#1, the latter sequence with methylated C's at positions 9, 13, and 15; #2 (#A2 in 5 , GCT AGA CGT TAG CGT; #2', GCT AGA GCT TAG GCT; #3, TCA ACG TTG A; and #3', TCA AGC TTG A.

Enzyme-linked immunospot (ELISPOT) assay

Numbers of cytokine-secreting spleen cells, after 8 h of in vitro stimulation with the indicated DNA preparations, were determined by ELISPOT as previously described 27 . Briefly, microtiter plates were coated with primary anti-cytokine Abs, blocked, and serial dilutions of single spleen cell suspensions incubated for 8 h at 37°C. Cytokine-secreting spots were detected by the addition of secondary biotinylated anti-cytokine Abs, followed by avidin-conjugated alkaline phosphatase and BCIP/NBT solution (Kirkegaard and Perry, Gaithersburg, MD).


    Results
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
Protection against lethal infection by bacterial chromosomal DNA

The ability of genomic DNA from pathogenic bacteria to protect against lethal bacterial infection was studied, first using F. tularensis LVS as a model pathogen. High m.w. genomic DNA (>25 kb) was purified from F. tularensis LVS by traditional methods 25 and contained low or no detectable levels of endotoxin (<1 pg/µg of DNA) and protein (<10 ng/µg of DNA). Male BALB/cByJ mice were treated with 0.01–20 µg of LVS DNA, and then challenged with 103 LD50 of LVS 3 days later. All mice treated with 0.5 µg of LVS DNA or greater survived, while PBS-treated controls died within an average of 6 days (Table IGo). LVS DNA further purified by cesium chloride equilibrium centrifugation was equally protective (Table IGo). In contrast, protection was not observed in mice treated with HP DNA (Table IGo). Protection was not dependent on the route of administration, as mice given 5 µg of LVS DNA i.m., i.p., or intradermally were well protected (Table IGo and data not shown). The magnitude of the protective effect was evaluated by challenging mice treated with 5 µg of purified LVS DNA with increasing numbers of F. tularensis LVS. As seen in Table IGo, 100% of the mice survived challenge with 106 LD50 of LVS bacteria. The time course of protection was examined by treating mice with 5 µg of LVS DNA on day 0 and challenging 3, 7, 10, 14, 21, and 28 days later; mice given genomic DNA 3–14 days before challenge were well protected, while those challenged at later time points were partially or completely succumbed to infection (data not shown).


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Table I. LVS DNA protects mice against lethal F. tularensis LVS infection

 
To examine the structural basis of this protection, LVS chromosomal DNA was treated with CpG methylase. Protection was greatly reduced when DNA was treated with CpG methylase (Table IIGo). These findings suggest that DNA containing unmethylated CpG motifs play a critical role in the protection conferred by bacterial DNA. However, we could not exclude the possibility that other entities contribute to the protection observed with LVS genomic DNA, particularly since methylation of LVS DNA did not completely abolish protection (Table IIGo). The well known mitogen LPS was of particular interest. To test the potential contribution of traditional endotoxin in these preparations, both LPS-responsive C3H/HeN and LPS-hyporesponsive C3H/HeJ mice were treated with cesium chloride-purified LVS DNA. Although both C3H substrains are equally quite susceptible to LVS infection, with the LD50 approaching a single bacterium 21 , both were fully protected against lethal challenge (Table IIIGo). This indicates that traditional endotoxin activity was not responsible for the protection induced by the bacterial DNA preparation.


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Table II. Effect of methylation of LVS DNA on protection against lethal F. tularensis LVS infection

 

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Table III. Protection by DNA against lethal F. tularensis LVS infection in C3H/HeN and C3H/HeJ mice

 
Protection against lethal infection by oligonucleotide DNA containing CpG motifs

To further examine the contribution of DNA alone to protection against lethal infection, we tested whether synthetic oligonucleotides expressing CpG motifs could mimic the activity of bacterial DNA; oligonucleotides were phosphorothioate-modified to increase their resistance to endogenous nucleases. Mice treated with CpG-containing oligo #1 survived lethal challenge with either LVS or L. monocytogenes, whereas mice treated with an oligonucleotide of the same sequence in which all CpG dinucleotides were methylated (Me-#1) did not survive challenge (Fig. 1GoA). Further, mice given a mixture of two other CpG-containing oligos, #2 and #3, survived LVS or L. monocytogenes challenge 3 days later (Fig. 1GoB), while mice treated with oligos #2' and #3', in which the respective CpG dinucleotides were inverted to GpC dinucleotides, all succumbed to challenge. In all experiments, no significant protection was conferred by treatment of mice with mammalian (HP) DNA.



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FIGURE 1. Oligonucleotide DNA protects mice from lethal F. tularensis LVS or L. monocytogenes (strain EGD) infection. Groups of five BALB/cByJ were treated with: A) PBS, 20 µg HP DNA, oligo #1 (CpG oligo #1), or Me-#1 (Me-CpG oligo #1); or B) 50 µg of HP DNA, 50 µg of an equal mixture of oligos #2 and #3 (CpG oligo #2 + #3), or 50 µg of an equal mixture of oligos #2' and #3' (GpC oligo #2' + #3') on day 0. Mice were then challenged with 103 LVS (open bars) or 2 x 105 L. monocytogenes strain EGD (hatched bars) i.p. on day 3; actual priming and challenge doses were confirmed by plate count at the time of inoculation. Mice were observed for morbidity and mortality through day 30. Time to death of those mice that died ranged from day 4 to day 8. These experiments are representative of five total experiments (A) and three total experiments (B) of similar design.

 
The amount of oligo #1 required to elicit protection, as well as the strength of protection elicited, was studied in more detail. BALB/cByJ mice were treated with 0.02–20 µg of oligo #1 DNA and then challenged with 103 LD50 of LVS 3 days later. All mice treated with 20 µg of LVS DNA survived, while mice given 2 µg or less were only partially protected, if at all (Table IVGo). However, protection was not strictly dependent on the route of administration, as mice given 20 µg of oligo #1 DNA i.p. or intradermally were well protected, while those given oligonucleotide DNA i.m. were less well protected (Table IVGo and data not shown). The magnitude of the protective effect was evaluated by challenging mice treated with 20 µg of oligo #1 DNA with increasing numbers of F. tularensis LVS. As seen in Table IGo, mice readily survived challenge with 104-105 LD50 of LVS bacteria.


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Table IV. Oligonucleotide DNA protects mice against lethal F. tularensis LVS infection

 
The time course of protection was also investigated by challenging mice at various intervals after treatment with oligonucleotide DNA. Very few mice given 20 µg of oligo #1 and then challenged on the same day or 1 day later with 10,000 LD50 survived, while most of those challenged 2–3 days later survived (Fig. 2GoA). However, improved survival was observed on day 1 when the challenge dose was lowered to 1000 LD50 (Fig. 2GoB). As noted in studies using chromosomal DNA, protection with oligonucleotide DNA lasted about 2 wk (Fig. 2GoC). Taken together, these experiments indicate that protection improves over the first few days after exposure to CpG-containing DNA, then wanes over time.



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FIGURE 2. Time course of oligonucleotide-induced protection of mice from lethal F. tularensis LVS infection. Groups of five BALB/cByJ mice were treated with 20 µg of oligo #1 (CpG oligo, filled bars), 20 µg Me-CpG oligo #1 (Me Oligo, hatched bars), or PBS (not shown) 0–28 days before challenge with 103 or 104 LVS i.p.; within an experiment, the day of DNA inoculation was varied and challenge performed on all groups on the same day. Mice were observed for morbidity and mortality through day 30. Time to death of those mice that died, including all PBS-treated mice, ranged from day 4 to day 7. In A, B, and C, experiments are representative of three total experiments of similar design.

 
The effect of DNA treatment on the dissemination and replication of bacteria in the organs of the reticuloendothelial system was also examined. Mice were treated with 20 µg of PBS, oligo #1, or Me-oligo #1, then challenged with 103 LVS i.p. 3 days later. Peritoneal cells, spleens, livers, and lungs were removed on days 1, 4, 7, 10, 14, 18, and 22 after challenge, and bacterial burdens in each organ were determined. As all PBS and Me-oligo #1-treated (control) mice succumbed to challenge between days 5 and 6, only results from days 1 and 4 are available for these groups. There was no significant effect on the numbers of bacteria in peritoneal cells or spleen (Fig. 3Go) on day 1 after challenge in oligo #1-treated mice compared with control mice. By day 4, however, there were significantly lower (p < 0.001) numbers of bacteria in both sites of oligo #1-treated mice compared with Me-oligo #1 mice, although numbers of bacteria in all mice increased compared with numbers observed on day 1. By day 7, numbers of bacteria in the peritoneal cells and spleens of oligo #1-treated mice had peaked, and they decreased thereafter until bacterial clearance was complete by day 24. Thus, bacteria readily disseminated and replicated in oligo #1-treated mice, but replication was eventually controlled and bacteria cleared over a 3-wk period. Similar trends were found in livers and lungs of the same mice (data not shown).



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FIGURE 3. Time course of bacterial burdens in organs of mice treated with oligonucleotide DNA and challenged with F. tularensis LVS. BALB/cByJ mice were treated with PBS (filled circles), 20 µg CpG oligo #1 (filled squares), or 20 µg Me-CpG oligo #1 (open squares) 3 days before challenge with 103 LVS i.p. On the indicated days, groups of four mice were sacrificed, and peritoneal cells (A), spleens (B), livers, and lungs (not shown) were homogenized for enumeration of LVS CFU. Results are expressed as mean CFU/ml (PECS) or mean CFU/organ (SPLEEN) ± SD. Time to death of those mice that died in the PBS and Me-CpG oligo #1 groups (+) ranged from day 5 to day 7. This experiment is representative of two total experiments of similar design.

 
Mechanism of protection against lethal infection by bacterial DNA

The immunostimulatory effects of genomic chromosomal LVS DNA and CpG-containing oligonucleotides were examined in vitro. Spleen cells from normal BALB/cByJ mice, which are predominantly lymphocytes, were incubated with DNA for 8 h and then assayed for cytokine production in vitro. Similar to previous results 3, 4, 5, 6, 7 , LVS genomic DNA and all three oligonucleotides (nos. 1, 2, and 3) stimulated significant in vitro production of IFN-{gamma}, IL-12, and IL-6; methylated LVS genomic DNA, methylated oligo #1, inverted oligos #2' and #3', and mammalian HP DNA did not (Fig. 4Go). No DNA preparation stimulated IL-4 production. Since GKO mice given LVS DNA do not survive LVS challenge (Table VGo), this cytokine clearly contributes to DNA-mediated protection and resolution of LVS challenge.



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FIGURE 4. Cytokine production from murine spleen cells stimulated by DNA preparations. The indicated preparations of DNA (all used at 1 µg/ml except for Me-LVS DNA, which was 0.5 µg/ml) were cultured with spleen cells from BALB/cByJ mice for 8 h, and ELISPOT assays for the various cytokines were performed as described in Materials and Methods. Results for oligos #1, #2, and #3 were all averaged and are shown as CpG OLIGO*; results for oligo Me-#1 are shown as Me-CpG OLIGO; and averaged results for oligos #2' and #3' are shown as GpC OLIGO*. Results are expressed as fold increase values for triplicate determinations ± SD. This experiment is representative of three total experiments of similar design.

 

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Table V. Protection by DNA against lethal F. tularensisLVS infection in GKO mice

 
To investigate the cellular basis of DNA-mediated protection, we studied protection in mice with known genetic defects. Results using mice treated with genomic LVS DNA are shown in Fig. 5Go, while those using mice treated with oligonucleotide DNA are shown in Fig. 6Go. Neither lymphocyte-deficient BALB/c.scid mice nor B cell KO (Igh6-) mice treated with either genomic DNA or oligo #1 DNA survived lethal challenge any longer than control mice. In contrast, most T cell-deficient BALB/c.nu/nu mice, or TCR KO mice deficient in both {alpha}ß and {gamma}{delta} T cells, treated with DNA survived lethal challenge for 2–3 wk longer than control mice; these mice eventually succumbed to challenge after about 3–4 wk. Overall, 82% of B cell KO mice given LVS genomic DNA (13 of 16 mice in 3 separate experiments) and 100% of B cell KO mice given 20 µg of oligo #5991 (19 of 20 mice in 4 separate experiments) died within a week following 100-1000 LD50 challenge, indicating that B cells are critical in DNA-mediated protection. On the other hand, 44% of TCR KO mice given 20 µg of oligo #5991 (7 of 16 mice in 3 separate experiments) died within a week following 100-1000 LD50 challenge, suggesting a lesser, but nonetheless significant, contribution of T cells.



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FIGURE 5. Time course of death of immunodeficient mice treated with genomic DNA and challenged with F. tularensis LVS. Groups of five BALB/cByJ mice were treated with: A) 20 µg of oligo #1 or PBS 3 days before challenge with 103 LVS i.p. (for all strains with a BALB/c background), or B) 105 i.p. (for all strains with a C57BL/6 background). Mice were observed for morbidity and mortality through day 60. Survival curves are shown for the following groups, all challenged with LVS: A, – – –, PBS-treated BALB/cByJ; ——, DNA- treated BALB/cByJ; – - - –, DNA-treated BALB/c-nu/nu; - - - - -, DNA-treated BALB/c.scid. B, – – – PBS-treated C57BL/6J; ——, DNA treated C57Bl/6J; – - - –, DNA- treated Igh6- (B cell KO). This experiment is representative of three total experiments of similar design in each panel.

 


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FIGURE 6. Time course of death of immunodeficient mice treated with oligonucleotide DNA and challenged with F. tularensis LVS. Groups of five BALB/cByJ mice were treated with 20 µg of oligo #1 or PBS 3 days before challenge with: A) 103 LVS i.p. (for all strains with a BALB/c background), or B) 105 i.p. (for all strains with a C57BL/6 background). Mice were observed for morbidity and mortality through day 60. Survival curves are shown for the following groups, all challenged with LVS: A, – – –, PBS treated BALB/cByJ; ——, DNA-treated BALB/cByJ; – - - –, DNA-treated BALB/c-nu/nu; - - - - -, DNA-treated BALB/c.scid. B, – – –, PBS-treated C57BL/6J; ——, DNA-treated C57BL/6J; – - - –, DNA-treated Tcrb-/Tcrd- (TCR KO); - - - -, DNA-treated Igh6- (B cell KO). This experiment is representative of three total experiments of similar design in each panel.

 
Previous studies suggested that CpG motifs may facilitate the development of Ag-specific immunity by initiating an inflammatory response at the site of vaccination 28, 29 . Therefore, we examined whether CpG-containing DNA fostered the subsequent development of pathogen-specific immunity. BALB/cByJ mice were treated with 5 µg of either LVS genomic DNA or 20 µg of oligo #1 and then challenged with 103 LVS i.p. on day 3; as expected, all mice survived. These mice were then challenged a second time on day 40 with either 1000 LD50 LVS i.p. or 100 LD50 L. monocytogenes i.p. A total of 94% (31 of 33 mice in 5 separate experiments) survived LVS challenge, while only 16% (3/19 mice in three separate experiments) survived L. monocytogenes challenge. Conversely, mice given 20 µg of oligo #1, challenged with L. monocytogenes on day 3, and challenged again with L. monocytogenes on day 40, survived both challenges (16 of 17 mice in 3 separate experiments), while none (0 of 12 in 3 separate experiments) survived LVS challenge. Thus, long-term, pathogen-specific immunity was generated when the lethal challenge was rendered sublethal by bacterial DNA treatment, similar to the protection induced by sublethal primary bacterial infection 17, 18, 22, 24 .


    Discussion
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
Although previous studies showed that bacterial DNA can have significant in vitro biological activity, the in vivo significance of these effects has been unclear. Our findings demonstrate that treatment of mice with DNA containing CpG motifs, either in the form of bacterial genomic DNA or synthetic oligonucleotide DNA, confers protection against lethal intracellular bacterial infection that is followed by long-term, pathogen-specific immunity. Protection is optimal several days after DNA treatment and persists for about 2 wk; further, DNA-induced protection is quite strong, permitting survival of over 10,000 LD50 of LVS infection. The time course of protection and of growth of bacteria in organs of treated mice suggests the development of an active systemic response, not simply activation of macrophages for localized killing of bacteria. This is consistent with the observation that protection appears to be dependent on IFN-{gamma} and the activity of lymphocytes, particularly B cells.

These results confirm and extend other recent observations concerning the ability of bacterial DNA to modulate infection by intracellular pathogens. Mice treated with CpG-containing oligonucleotides limited primary infection and resisted secondary infection with Leishmania major, as measured by footpad swelling; resistance to infection was correlated with the induction of Th1-related cytokines, particularly IL-12 30 . In contrast to the results presented here, Zimmermann et al. 30 further demonstrated that oligonucleotides protected susceptible mice from Leishmania infection when administered several weeks after infection. However, this difference may simply be due to the slower proliferation of Leishmania parasites compared with bacteria, permitting time for intervention. In another recent study, mice treated with Escherichia coli DNA or unmethylated oligonucleotide of the same sequence used for some of these studies (oligo #1) produced a sustained serum IL-12 (but not IFN-{gamma}) response; further, DNA-treated mice infected with L. monocytogenes 2–4 days after treatment subsequently had much lower bacterial burdens in spleens and livers 31 . On the other hand, in some circumstances bacterial DNA appears to promote shock in vivo, probably through production of TNF-{alpha} 32, 33 . Here, we show that host response to genomic DNA from a pathogenic bacterium results in long-term survival of a frank lethal infection with the homologous bacterium. Further, for the first time, we define the cellular basis of protection induced by DNA containing CpG motifs, with the surprising result that lymphocytes are required with an apparently Ag-nonspecific activity. The structural basis of the protection induced by genomic DNA was defined by using oligonucleotide DNA containing unmethylated CpG dinucleotides, which also protected against lethality in two different intracellular bacterial model systems. Preliminary data also suggests that oligonucleotide DNA does not protect against infection with two extracellular bacterial pathogens, enterohemorrhagic E. coli and Yersinia enterocolitica (data not shown).

While it is difficult to precisely compare the dose responses of protection induced by genomic DNA and oligonucleotide DNA on a molar basis, they seem to be roughly comparable. This was also true in previous studies comparing bacillus Calmette-Guérin DNA and a synthetic oligonucleotide in terms of their capacity to stimulate NK cell activity and IFN production 7 . To date, LVS DNA has been found to be rather A-T rich but completely unmethylated 34, 35, 36 , which may mean that it has a rather high number of immunostimulatory GpC motifs in non-A-T regions. Our preparations of genomic DNA may also contain other entities that contribute to protection and/or that synergize with CpG-containing DNA to promote protection. The most obvious of these is LPS, derived either from the LVS bacteria themselves or the broth in which the bacteria are grown, which could copurify with DNA. Francisella is a Gram-negative bacterium with its own LPS. However, LVS LPS apparently lacks endotoxic activity as well as stimulatory activity for murine B cells and macrophages 37, 38 , does not react in LAL assays 37 , and is difficult to detect by silver staining or other physicochemical methods 39 . Here, genomic DNA was prepared using endotoxin-controlled reagents and was tested for presence of endotoxin by LAL; all preparations were less than 1 pg/µg of DNA. These data, as well as results using C3H/HeJ endotoxin-hyporesponsive mice and the dose response studies, strongly indicated that protection was not due to simple endotoxin contamination. However, we cannot exclude the possibility that LVS LPS, which is difficult to detect, contributes to protection observed with genomic DNA. Indeed, we have recently found that mice treated with purified LVS LPS are protected against lethal LVS challenge as well (although we cannot exclude the possibility that the LPS preparation is not itself contaminated with LVS DNA).

Endotoxin was not a consideration in studies using oligonucleotides, which conclusively demonstrate that mice treated with unmethylated CpG-containing DNA survive subsequent lethal challenge with two different intracellular pathogens, F. tularensis LVS and L. monocytogenes. Protection is clearly dependent on CpG motifs, as methylation of the cytosine residues or inversion of the CpG dinucleotide to GpC abolished the protective activity of the oligonucleotides. Oligonucleotide mediated protection against a 1000 LD50 lethal challenge apparently required 1–2 days to develop and was active for about 10 days, but waned thereafter. This time course, coupled with the time course of bacterial growth, strongly suggests that protection is the result of activation of cells of the innate immune system. Somewhat surprisingly, this nonspecific protection was dependent on the presence of lymphocytes, particularly B cells and, to a lesser degree, T cells; scid mice and B cell KO mice treated with DNA were unable to survive lethal challenge for any longer than control mice, and TCR-deficient mice as well as nude mice were somewhat compromised in their ability to survive 100 LD50. It should be noted that, as previously shown, T cell-deficient mice eventually succumb to any LVS infection due to the absence of long-term T cell-dependent immunity 24 . This is reminiscent of our previous results in that normal mice, but not lymphocyte-deficient or B cell-deficient mice, given a sublethal infection of F. tularensis LVS survive a secondary lethal LVS challenge of over 10,000 LD50 given 3 days later 17, 18, 24 . Similar early protection that is also strongly lymphocyte-dependent operates in L. monocytogenes infection 23 . Since sublethal infection with either LVS or L. monocytogenes protects against heterologous lethal challenge with either bacteria, this early protection is nonspecific; however, the bacterial determinants that stimulate this lymphocyte-dependent innate immune response have not been defined. The results presented here imply that lymphocytes, in addition to macrophages and NK cells, contribute significantly to innate immunity. Further, early protective immunity may, at least in part, involve host response to the bacterial DNA released early during the course of infection. These results also provide physiologic evidence in support of the hypothesis that CpG suppression and/or CpG methylation were evolutionarily conserved because these modifications improved the immune system’s capacity to recognize and respond to pathogenic bacteria 6 .

Since treatment of mice with DNA converted a lethal challenge to a sublethal challenge, it was likely that long-term specific protective immunity developed. This was indeed the case, as evidenced by the ability of mice that survived a lethal LVS infection to later survive a second lethal LVS challenge, but not a lethal L. monocytogenes challenge, and vice versa. The stimulation of innate immunity by bacterial DNA, permitting time for development of an Ag-specific immune response and/or improving the overall quality of the Ag-specific immune response, is no doubt part of the adjuvant activity of bacterial DNA previously described for the development of Th1 immune responses and DNA vaccine-mediated immune responses 9, 28 . Since the CpG-containing DNA used here primarily stimulates Th1-related cytokines, we predicted that protection would involve at least some of these cytokines. Indeed, GKO mice treated with DNA did not survive lethal LVS challenge, and preliminary evidence suggests that the same is true for IL-12 KO mice (K. L. Elkins and S. Colombini, unpublished data). Thus, in addition to B cells, at least IFN-{gamma} and probably IL-12 are required for successful DNA-mediated protection.

Taken together, these results indicate that bacterial DNA containing unmethylated CpG motifs induces protective immunity against lethal intracellular infection and that this protection is dependent on the nonspecific activity of lymphocytes as well as the production of immunoregulatory cytokines. Under physiological conditions, we propose that bacterial DNA released during intracellular bacterial infection may provide at least part of the stimulus for innate immunity. Further, synthetic CpG-containing oligonucleotides may be of clinical benefit in stimulation of an innate immune response, or in combination with vaccines, to enhance the development of long-term protective immunity.


    Acknowledgments
 
We thank Dr. Arthur Kreig (University of Iowa, Iowa City, IA) for suggesting the #5991 sequence for use in protection studies and for helpful discussions; Ms. Susan Colombini for excellent technical assistance; and our Center for Biologics Evaluation and Research (CBER) colleagues, Drs. Keith Peden, Suzanne Epstein, Steven Kozlowski, and Jerry Weir, for critical readings of the manuscript. This article is dedicated to the memory of Dr. Roberta D. Shahin, our friend and colleague, whose companionship and insight were instrumental in the progression of these and many other studies.


    Footnotes
 
1 This work was supported in part by the National Vaccine Program. Back

2 Address correspondence and reprint requests to Dr. Karen L. Elkins, Laboratory of Mycobacteria, 1401 Rockville Pike, HFM 431, Rockville, MD 20852. E-mail address: Back

3 Abbreviations used in this paper: KO, knockout; LVS, live vaccine strain of F. tularensis; MH, Mueller-Hinton; GKO, IFN-{gamma} knockout; ELISPOT, enzyme-linked immunospot; HP, human placental; LAL, Limulus amebocyte lysate; MTD, mean time to death. Back

Received for publication September 22, 1998. Accepted for publication November 10, 1998.


    References
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 

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Local Delivery of CpG Oligodeoxynucleotides Induces Rapid Changes in the Genital Mucosa and Inhibits Replication, but Not Entry, of Herpes Simplex Virus Type 2
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Infect. Immun.Home page
N. B. Ray and A. M. Krieg
Oral Pretreatment of Mice with CpG DNA Reduces Susceptibility to Oral or Intraperitoneal Challenge with Virulent Listeria monocytogenes
Infect. Immun., August 1, 2003; 71(8): 4398 - 4404.
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J. Immunol.Home page
I. Gursel, M. Gursel, H. Yamada, K. J. Ishii, F. Takeshita, and D. M. Klinman
Repetitive Elements in Mammalian Telomeres Suppress Bacterial DNA-Induced Immune Activation
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J. Immunol.Home page
D. Verthelyi, M. Gursel, R. T. Kenney, J. D. Lifson, S. Liu, J. Mican, and D. M. Klinman
CpG Oligodeoxynucleotides Protect Normal and SIV-Infected Macaques from Leishmania Infection
J. Immunol., May 1, 2003; 170(9): 4717 - 4723.
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Int ImmunolHome page
Y. Wang and A. M. Krieg
Synergy between CpG- or non-CpG DNA and specific antigen for B cell activation
Int. Immunol., February 1, 2003; 15(2): 223 - 231.
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Infect. Immun.Home page
W. Jiang, H. J. Baker, and B. F. Smith
Mucosal Immunization with Helicobacter, CpG DNA, and Cholera Toxin Is Protective
Infect. Immun., January 1, 2003; 71(1): 40 - 46.
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J. Virol.Home page
A. M. Harandi, K. Eriksson, and J. Holmgren
A Protective Role of Locally Administered Immunostimulatory CpG Oligodeoxynucleotide in a Mouse Model of Genital Herpes Infection
J. Virol., December 20, 2002; 77(2): 953 - 962.
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J. Immunol.Home page
H. Yamada, I. Gursel, F. Takeshita, J. Conover, K. J. Ishii, M. Gursel, S. Takeshita, and D. M. Klinman
Effect of Suppressive DNA on CpG-Induced Immune Activation
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FASEB J.Home page
L. SFONDRINI, D. BESUSSO, C. RUMIO, M. RODOLFO, S. MENARD, and A. BALSARI
Prevention of spontaneous mammary adenocarcinoma in HER-2/neu transgenic mice by foreign DNA
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J. Immunol.Home page
K. Heckelsmiller, K. Rall, S. Beck, A. Schlamp, J. Seiderer, B. Jahrsdorfer, A. Krug, S. Rothenfusser, S. Endres, and G. Hartmann
Peritumoral CpG DNA Elicits a Coordinated Response of CD8 T Cells and Innate Effectors to Cure Established Tumors in a Murine Colon Carcinoma Model
J. Immunol., October 1, 2002; 169(7): 3892 - 3899.
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J. Virol.Home page
M. Gierynska, U. Kumaraguru, S.-K. Eo, S. Lee, A. Krieg, and B. T. Rouse
Induction of CD8 T-Cell-Specific Systemic and Mucosal Immunity against Herpes Simplex Virus with CpG-Peptide Complexes
J. Virol., June 5, 2002; 76(13): 6568 - 6576.
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Infect. Immun.Home page
Y. He, R. Vemulapalli, and G. G. Schurig
Recombinant Ochrobactrum anthropi Expressing Brucella abortus Cu,Zn Superoxide Dismutase Protects Mice against B. abortus Infection Only after Switching of Immune Responses to Th1 Type
Infect. Immun., May 1, 2002; 70(5): 2535 - 2543.
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J. Leukoc. Biol.Home page
M. Gursel, D. Verthelyi, I. Gursel, K. J. Ishii, and D. M. Klinman
Differential and competitive activation of human immune cells by distinct classes of CpG oligodeoxynucleotide
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Infect. Immun.Home page
R. Dudani, Y. Chapdelaine, H. van Faassen, D. K. Smith, H. Shen, L. Krishnan, and S. Sad
Preexisting Inflammation Due to Mycobacterium bovis BCG Infection Differentially Modulates T-Cell Priming against a Replicating or Nonreplicating Immunogen
Infect. Immun., April 1, 2002; 70(4): 1957 - 1964.
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Infect. Immun.Home page
N. P. Juffermans, J. C. Leemans, S. Florquin, A. Verbon, A. H. Kolk, P. Speelman, S. J. H. van Deventer, and T. van der Poll
CpG Oligodeoxynucleotides Enhance Host Defense during Murine Tuberculosis
Infect. Immun., January 1, 2002; 70(1): 147 - 152.
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J. Immunol.Home page
Z. K. Ballas, A. M. Krieg, T. Warren, W. Rasmussen, H. L. Davis, M. Waldschmidt, and G. J. Weiner
Divergent Therapeutic and Immunologic Effects of Oligodeoxynucleotides with Distinct CpG Motifs
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Clin. Cancer Res.Home page
G. Auf, A. F. Carpentier, L. Chen, C. Le Clanche, and J.-Y. Delattre
Implication of Macrophages in Tumor Rejection Induced by CpG-oligodeoxynucleotides Without Antigen
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Infect. Immun.Home page
T. Hayashi, S. P. Rao, K. Takabayashi, J. H. Van Uden, R. S. Kornbluth, S. M. Baird, M. W. Taylor, D. A. Carson, A. Catanzaro, and E. Raz
Enhancement of Innate Immunity against Mycobacterium avium Infection by Immunostimulatory DNA Is Mediated by Indoleamine 2,3-Dioxygenase
Infect. Immun., October 1, 2001; 69(10): 6156 - 6164.
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J. Immunol.Home page
I. Gursel, M. Gursel, K. J. Ishii, and D. M. Klinman
Sterically Stabilized Cationic Liposomes Improve the Uptake and Immunostimulatory Activity of CpG Oligonucleotides
J. Immunol., September 15, 2001; 167(6): 3324 - 3328.
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J. Immunol.Home page
B. E. Britigan, T. S. Lewis, M. Waldschmidt, M. L. McCormick, and A. M. Krieg
Lactoferrin Binds CpG-Containing Oligonucleotides and Inhibits Their Immunostimulatory Effects on Human B Cells
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Infect. Immun.Home page
A. Al-Mariri, A. Tibor, P. Mertens, X. De Bolle, P. Michel, J. Godefroid, K. Walravens, and J.-J. Letesson
Protection of BALB/c Mice against Brucella abortus 544 Challenge by Vaccination with Bacterioferritin or P39 Recombinant Proteins with CpG Oligodeoxynucleotides as Adjuvant
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Cancer Res.Home page
M. Hafner, R. Zawatzky, C. Hirtreiter, W. A. Buurman, B. Echtenacher, T. Hehlgans, and D. N. Mannel
Antimetastatic Effect of CpG DNA Mediated by Type I IFN
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J. Immunol.Home page
H. Weighardt, C. Feterowski, M. Veit, M. Rump, H. Wagner, and B. Holzmann
Increased Resistance Against Acute Polymicrobial Sepsis in Mice Challenged with Immunostimulatory CpG Oligodeoxynucleotides Is Related to an Enhanced Innate Effector Cell Response
J. Immunol., October 15, 2000; 165(8): 4537 - 4543.
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J. Immunol.Home page
G. B. Lipford, T. Sparwasser, S. Zimmermann, K. Heeg, and H. Wagner
CpG-DNA-Mediated Transient Lymphadenopathy Is Associated with a State of Th1 Predisposition to Antigen-Driven Responses
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Infect. Immun.Home page
V. C. Dreisbach, S. Cowley, and K. L. Elkins
Purified Lipopolysaccharide from Francisella tularensis Live Vaccine Strain (LVS) Induces Protective Immunity against LVS Infection That Requires B Cells and Gamma Interferon
Infect. Immun., April 1, 2000; 68(4): 1988 - 1996.
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J. Immunol.Home page
J. Fensterle, L. Grode, J. Hess, and S. H. E. Kaufmann
Effective DNA Vaccination Against Listeriosis by Prime/Boost Inoculation with the Gene Gun
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