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*
Department of Biological Science and Structural Biology Program, Florida State University, Tallahassee, FL 30306;
Institute of Biology, University of Oslo, Oslo, Norway; and
National Institute of Public Health and Institute of Pharmacy, Oslo, Norway
| Abstract |
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| Introduction |
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The two human IgA subclasses have distinctly different hinge regions. IgA1, the predominantly secreted subclass, has a 26-aa hinge containing several sites for glycosylation. By analogy to the IgG hinges, it appears likely that IgA2 has a 13-aa proline-rich hinge free of glycosylation sites. Ten of the amino acids of the hinge comprise the MH, with only perhaps a single proline representing a UH and a His-Pro for a LH. Sykulev et al. (21) using spin labeling found IgA2 to be considerably less flexible than IgA1, but more flexible than IgM and IgE.
IgM and IgE, unlike IgG and IgA, do not possess a formal hinge, having
instead an extra C region domain at the hinge site. However, the Fab
arms of IgM and IgE are believed to exhibit some, albeit limited,
flexibility at the CH1-CH2 and
CH2-CH3 junctions (11, 22). Nevertheless, a
variety of evidence indicates that human and murine IgE are less
flexible than any of the hinged classes or subclasses (21, 23, 24).
Moreover, the Fc of IgE is believed to be in a hooked conformation both
in solution and when complexed with the IgE FcR (24, 25). Various
physicochemical evidence suggests that the C-terminal region of the
Fc
is in close proximity to the CDR region of the molecule (22, 26).
Modeling suggests that the Fc is hooked so that it curls up toward the
Fab arms. Anisotropy studies suggest that human IgM is moderately
flexible (27, 28), but direct comparisons of monomeric IgM to IgG using
combining site labels have not been reported. Electron-microscopy
studies clearly show Fab-Fc flexure in IgM that appears to be both at
the CH1-CH2 and CH2-CH3
junctures. The flexure is most evident when IgM is induced to adopt the
staple conformation upon binding to multiple epitopes on a planar
surface (4).
In this study, we compare the ability of an Id-matched set of IgM (monomeric subunits), IgE, IgA2, and six hinge-mutant forms of IgG3 to adopt the conformation necessary to form small immune complexes with an anti-Id mAb. In addition, we compare the Fab-Fab angles of uncomplexed forms of each of the Igs to gain insight into their innate hinge-folding flexibility capacity. The data reveal several unexpected observations.
| Materials and Methods |
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Cell lines producing chimeric IgG3 wild-type and mutant
molecules composed of murine VH and
1-light chain and
human
-chains have previously been described (13, 14, 15, 16). All of the
above Abs have identical specificity (for the haptens NP and
NIP) and Ids. IgA2- and IgE-producing cell lines were obtained from
European Center of Animal Cell Culture (Salisbury, U.K.). The
construction of the IgM C575S mutant secreting only monomeric subunits
has previously been described (29). The murine IgG1 anti-Id mAb,
5B5, was produced by the Hybridoma Facility (Department of Biologic
Science, Florida State University, Tallahassee, FL), as previously
described (1). All cells were grown in RPMI 1640 supplemented with 10%
FCS.
Antibodies
Culture supernatants containing each of the various Igs and the anti-Id mAb were collected. Id and anti-Id Ig were purified by affinity chromatography using NIP-caproate-o-succinimide (Genosys Biotech, The Woodlands, TX)-Sepharose and Id-IgG-Sepharose columns, respectively. Specific mAbs were eluted with 0.2 M glycine sulfate, pH 2.3, and immediately neutralized with 1 M Tris base. Some of the Id Ab were also isolated from the NIP-Sepharose by 0.1 mM free NIP (Cambridge Research Biochemicals, Cambridge, U.K.). Fab fragments of anti-Id 5B5 were produced with papain-Sepharose (Pierce, Rockford, IL), as described by the manufacturer. Ab concentrations were determined by UV absorption (at 280 nm) using published extinction coefficients (30).
Immunoelectron microscopy
Immunoelectron-microscopic analyses of mAbs and immune complexes
were performed by negative staining, as previously described (31, 32, 33).
Whole molecule reactants were mixed at a one-to-one molar ratio (at
1 µg/ml each) in borate-buffered saline and incubated at room
temperature for 30 min. Initially, not all of the Id/anti-Id
combinations yielded >90% of the molecules in complexes (the minimum
acceptable percentage), probably due to differences in size, extinction
coefficient, and measurement error. Consequently, slight adjustments in
the concentrations of reactants were made until the appropriate level
of complex formation was achieved. Following incubation, the reactants
were affixed to carbon membranes, stained with uranyl formate, and
mounted on copper grids for analysis. Electron micrographs were
recorded at x50,000 or x100,000 magnification on a JEOL CX 1200
electron microscope. Scoring of immune complexes was performed directly
on the electron micrographs with a hand-held lens, and angular and
hinge-length measurements were scored with an optical loupe fitted with
measuring graticules (Electron Microscopy Sciences, Fort Washington,
PA). At least 1000 molecules were scored for each sample of immune
complexes. For angular measurements, at least 100 molecules were scored
for each sample. All scoring was done blind.
| Results and Discussion |
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The segmental flexibility of Ab molecules represents a key aspect of their functionality. As cell surface receptors, Ag-induced Ab cross-linking on, for example, B cells or mast cells, determines whether an Ag engagement translates into a signaling event. Cross-linking, in turn, depends not only on affinity, but on the ability of the Fab arms of the Ig molecules to adjust their orientation to accommodate particular orientation of any cognate epitope array. Similarly, soluble Abs such as cytotoxic and receptor-targeted Abs usually bind cell or viral surface epitopes bi- or polyvalently and generally cross-link to exert their effector function. Soluble Abs are also responsible for the neutralization of soluble Ags such as bacterial toxins through cross-linking. The biologic consequences and ultimate fate of such complexes depend on their size and Ig isotype content as they fix complement, induce ADCC or inflammation, or are cleared by Fc-mediated mechanisms (34). To fully understand Ab function, we must have an appreciation not only of the structure and function of the reactants in an immune complex, but also the geometry of the more rigid segments and the modes of segmental flexibility.
Electron-microscopic analysis of Ig and immune complexes
In our prior study, we investigated the relative flexibility of each of the four human IgG subclasses by direct immunoelectron-microscopic examination. The Fab arms of free molecules were visualized with anti-Id Fab fragments, and the Fab-Fab angles were measured. In addition to determining the mean angle for each IgG type, the SD from the mean was used as an indicator of the relative ability of the molecules to flex up and down. We termed this value the hinge fold flexibility function. In addition, we employed a functional assay to measure the relative flexibility. This assay consisted of mixing Id-bearing IgG molecules with an equal molar ratio of an anti-Id mAb. The resultant small soluble immune complexes were shown to approach an equilibrium for this system when incubated at room temperature for 30 min at 1 µg/ml (1). The geometry of the complexes from each Id/anti-Id combination was scored and compared. The particular negative staining protocol used in these studies is believed to give a fair representation of the types of immune complexes present in solution. In contrast to other procedures in which complexes are dried onto the supporting membrane (while being exposed to increasing concentrations of buffer and/or stain, risking dissociation or, conversely, aggregation), our preparation protocol allows molecules and complexes to spontaneously bind to the membrane while in solution (32, 34, 35).
Using this approach, we were able to show that IgG3 was, for each
measurement, more flexible than the other subclasses, followed by IgG1
and, finally, IgG4 and 2. In this study, we apply the same approach to
analyze additional members of this Id-matched set: IgM (as monomeric
subunits), IgE, IgA2, and a series of genetically engineered IgG3 hinge
mutants, in an effort to further dissect the parameter that influences
the relationship between the segmental flexibility, the unique
structural features of Abs, and the geometry of immune complex
formation. Examples of electron micrographs showing Id/anti-Id
complexes and free Fab-tagged Ig molecules are shown in Figures 1
and 2,
respectively. Our previously reported data for human IgGs 1, 2, 3, and
4 (1) are included in the figures and tables for comparative purposes.
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The UH determines flexibility in native and hinge-mutated IgGs
The structure and composition of the hinge region of Ig molecules
are generally considered to be most important for segmental
flexibility. The amino acid sequence of the various native and mutant
hinges is shown in Table I
. Wild-type IgG3 has an exceptionally long
structural hinge comprised of a 12-aa UH, a 50-aa MH, and an 8-aa LH.
Fortuitously, the genetic hinge of IgG3 is encoded by four separate
exons encoding, from N to C terminus, a 17-aa segment (of which the
N-terminal 12 aa comprise the UH) and three identical 15-aa segments,
thus containing a 17-15-15-15 genetic hinge. By deleting one or more of
the 15-mer exons, IgG molecules have been produced in which the MH has
been incrementally shortened (mutants designated 17-15-15 and 17-15)
while maintaining the UH and LH. By deleting the 17-mer segment, the
bulk of the MH can be left intact, but the UH is shortened to 4 aa
(mutant 15-15-15). Alternatively, both the UH and MH can be shortened
(mutant 15). Other variations include removal of all four hinge exons
(HM5) (14), or replacement of the natural hinge with a short artificial
hinge (Ala-Ala-Ala-Cys-Ala) as in HM4 (13).
As previously observed for this system, more than 90% of the Id and
anti-Id molecules form complexes (Fig. 3
), and the majority of these (66 to
83%) are in cyclic form. Because all Id-bearing molecules display the
same Fv region and are reacting with the same anti-Id molecule, any
difference in the size distribution of immune complexes between the
various mutant and wild-type molecules will be the result of the
structural features, in particular, the flexibility-determining regions
of the Id-bearing molecules (1).
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The HM4 mutant has a short artificial hinge composed of a 3-aa UH above
a MH consisting of a single Cys engaged in an interchain disulfide
bond. Such a short compact hinge structure would be expected to enhance
steric interactions of the hinge-proximal regions of the Fab arms with
each other and with the Fc, leaving little room for the Fab arms to
maneuver into the conformation needed for closure of a ring dimer.
Indeed, the hinge-folding flexibility data show HM4 to be one of the
least flexible (±33°) (Tables II and IV). In addition, ring dimers
represented only 2.5% of the HM4/anti-Id complexes (Table II
).
These results also serve to confirm that essentially all of the
anti-Id molecules in our preparation are hinge intact (i.e.,
interchain disulfide bonded). Uncoupling hinge peptides through
reduction and alkylation of interchain disulfide bonds has previously
been shown to foster ring dimer formation between IgGs otherwise
incapable of Id/anti-Id complex formation (42).
Hingeless IgG is flexible
HM5 (Dob-like) is a hingeless construct in which the light chains
are covalently attached to each other rather than to the heavy chains
and in which the heavy chains are not disulfide bond cross-linked due
to the lack of a genetic hinge. These molecules also yielded a
predominance of tetrameric and larger ring forms (45%) (Fig. 3
) as
seen in the electron micrograph (Fig. 1
). Such a pattern is predicted
for a molecule that might be expected to be severely constrained in all
modes of flexibility. Consequently, we were surprised to observe that
26% of the molecules were actually able to form ring dimers, a
percentage considerably higher than that of native IgG1, -2, or -4. Of
the wild-type IgGs, only IgG3 produced more ring dimers (47%) (Table II
, Fig. 3
).
Analysis of the hinge fold flexibility for HM5 provides no
obvious explanation for this unexpected result, since its value
(±39°) was near the midrange of tested molecules. One possible
explanation for the high level of ring dimers is that the tethered
light chains hold the Fab arms of HM5 in a position that favors the
conformation necessary for ring dimerization. As we and others have
previously pointed out, just because a structure is not flexible, it
may still engage in interactions associated with flexibility, if, by
chance, the molecule is already fixed in a permissive conformation (1, 9). Although this mutant does have the smallest mean angle (105°) of
those tested, this is still a long way from parallel. An interesting
alternative explanation is that the L-L disulfide bond between the two
Fab arms might function as a pivot point allowing a more parallel
orientation of the Fab arms, as depicted in Figure 4
: there is no H-H disulfide bond to
prevent the lateral movement of the proximal base of the Fab arms as
would be the case in all other molecules tested. Previous nanosecond
polarization (42) and electron-microscopic data (41, 43) have shown
that the absence of a disulfide bond to bridge the N termini of the
CH2 domains greatly increases Fab-Fab flexibility by
allowing the Fc halves to splay apart due to a second hinge at the
CH2-CH3 junction (44). The ability of
hinge-deleted IgG4 to more readily bind Ag than intact IgG4, as
reported by Horgan et al. (45), can probably be similarly explained.
|
Based on the ability to form ring dimeric immune complexes, IgA2
appears to be the least flexible of any of the native Ig classes,
subclasses, or hinge mutants tested. Ring dimers are virtually absent
(<1%), with most molecules contributing to either ring tetramers or
larger ring complexes (69%) (Figs. 1
and 3
, Table II
). IgA2 also has a
low level of hinge-folding flexibility (±34°) (Tables II and IV).
From a structural standpoint, this is perhaps not too surprising. IgA2
has essentially no UH, with only a rigid Pro residue falling between
the amino acid generally ascribed to CH1 and the N-terminal
Cys of the MH region. It would appear that the amino acids at the
CH1-hinge juncture do not provide sufficient flexure to
allow the closed angle Fab-Fab orientation needed for ring
dimerization. The MH of IgA2 is 8 aa long, proline rich, and thus
presumably rigid. The LH is 2 aa long, and probably affords little
hinge-Fc flexibility either. Thus, the IgA2 hinge is almost completely
devoid of any features that would contribute to independent Fab-Fab or
Fab-Fc movement. Such a short rigid hinge may be a tradeoff affording
the molecule some protection from proteolytic digestion in the harsher
environment following mucosal secretion (47).
IgE may be fairly flexible
IgE has no formal hinge region and might have been expected to
dimerize with difficulty. Although the junctures between
CH1, CH2, and CH3 may provide some
hinge-like function (48), data from various anisotropic techniques show
IgE to be considerably less flexible than the IgGs (23, 26, 49, 50)
(reviewed in 2 . The fact that 26% of the molecules formed dimers
(Figs. 1
and 3
, Table II
) (versus 4 and 5% for IgG2 and IgG4,
respectively) suggests that IgE is either more flexible than predicted
or its Fab arms are held in a conformation fairly conducive to
dimerization. The general consensus is that the molecule is hook
shaped, with the Fc curled back toward the Fab arms, with the Fab arms
more parallel (Y-shaped) than divergent (T-shaped), forming a tripod
arrangement (22, 25, 26, 51, 52). The average distance between
the tips of the Fab arms and the C terminus of the Fc of murine IgE was
calculated to be 71 Å, with a range of 63 to 87 Å, necessitating a
fairly extreme U-shaped hooking of the Fab and Fc segments (25). When
the same technique was applied to human IgG, the average N and C
termini were determined to be only slightly further apart (75 Å), but
with a much greater range (57143 Å) than IgE (26). In view of other
models based on small angle x-ray scattering and sedimentation studies
(10) and electron microscopy studies (1, 53), such folding of
the IgG1 arms seems unlikely, suggesting that IgE may not be as hooked
as perceived.
Our analysis of IgE, in which the Fab arms are tagged with Fab anti-Id, does show a relatively restricted array of Fab-Fab angles (±34°) in agreement with the physicochemical data. However, we found IgE to display the most laterally protruding arms (141°, most T shaped) of any of the Igs tested (Tables II and IV). Such a strong deviation from the near parallel Fab arm orientation needed for ring dimerization is difficult to reconcile with the substantial level of observed dimerization (26%) and the various data showing restricted flexibility and the hook-shaped model of the molecule in solution (22, 23, 24, 25, 26, 49, 50, 51, 52). Perhaps the average of all of the modes of IgE segmental flexibility is low, but certain modes are more permissive. For example, the Fab arms of IgE may cross the small angle threshold (to allow the formation of ring dimers) more frequently than other Igs having shallower mean angles and a greater flexibility function (SD), but which may be otherwise inhibited, for subtle structural reasons, from crossing the threshold. Thus, flexibility, rather than a more rigid preferential orientation of the Fab arms, would be responsible for the ease with which ring dimers are formed in IgE. Investigations by others using divalent haptens show that ring dimers of murine IgE are permissible, although under strain (54).
Modification of the model of IgE
With regard to the shape of the molecule, we propose a
modification of the hooked model that fits our data, yet may still be
consistent with the bulk of the energy transfer and x-ray and
neutron-scattering data (22, 25, 26). Rather than having all
three segments curved around toward each other, we propose that the Fab
arms are pointed in opposite directions and that the Fc is hooked
either toward one arm (i.e., one arm very close to the Fc terminus and
the other further away) or that the Fc brings the C terminus up near
the bases of the Fab arms so that both CDRs are equidistant from the Fc
base (Fig. 5
). This latter model has the
added feature of prepositioning the Fab arms in an orientation that may
be more conducive of cross-linking.
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RI (22). IgM may be very flexible
The human mutant IgM (IgM C575S) molecule, secreted as monomeric
subunits (29), also proved dramatically more capable of forming ring
dimers than anticipated. In fact, it formed the highest percentage of
ring dimers of any Ig (75%), a level far above IgG3 (47%), the Ig
molecule generally viewed as being the most flexible (Fig. 1
, Tables II
and IV). As with IgE, the anisotropy data for IgM (including monomeric
forms) show relative segmental inflexibility (27, 28). On the other
hand, electron microscopic analyses reveal pronounced flexing at
CH1-CH2 and CH2-CH3
switch regions in the pentameric form when binding planar Ag arrays,
i.e., the molecule can bend into the so-called staple conformation (4).
Our hinge-folding data show IgM to have a Fab-Fab fold flexibility
(±56°) slightly greater than even IgG3 (±53°) (Tables II and IV).
The mean Fab-Fab angle of IgM (106°) is considerably less than that
of IgG3 (136°) and about equal to the smallest angle of all of the
tested molecules (HM5 at 105°). Together, the data suggest that IgM
Fab arms are capable of as broad an array of angles as IgG3, but with
an average centered around a more closed angle, i.e., closer to the
near parallel orientation needed for dimeric ring closure.
Structural features affecting flexibility
Perhaps the slower anisotropy decay values in the literature
for IgM and IgE (2) stem from the added mass of the extra domain pair
(CH2), as compared with hinge peptide segments, together
with the short CH1-CH2 and
CH2-CH3 peptide junctures. Either independently
or together, these properties might serve to dampen the rate of motion,
but not the range of motion. The observation that these two similarly
constituted molecules fall near opposite ends of the Fab-Fab mean angle
and hinge fold flexibility rank orders lists (Table IV
) suggests that there might be
considerable differences in the association of the pairing of the
CH2 domains at the base of the Fab arms and in the
CH2-CH3 and/or CH1-CH2
junctures.
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-helix (7), but
this structure is probably a result of crystal-packing forces (55). In
comparison, the 4-aa UH molecules (15-15-15 and 15) form only 3 to 7%
ring dimers, considerably less than the 18% of IgG1. We speculate that
the additional N-terminal 5 aa of the UH of IgG1 (Glu Pro Lys Ser Cys),
in conjunction with the C-terminal amino acid tail of the light chain
to which it is disulfide bonded, also contribute some degree of
flexibility of this molecule. Another apparent exception to the pattern is IgG4, in which its 7-aa hinge allows no more ring dimer formation (5%) than the 3- or 4-aa UH molecules (37%). The explanation for this apparent anomaly may be that two prolines are situated just N terminus of the N-terminal Cys of the MH. Not only would these prolines serve to shorten the flexible part of the chain to 5 aa, but they could conceivably orient the protruding chains in a direction unfavorable for ring closure.
Together, our results suggest caution when using a concept as multifaceted as flexibility to predict or explain functional aspects of Ig molecules based on data from physicochemical techniques. For example, the hingeless IgG1 mutants, Dob and Mcg, were previously assumed to be rather rigid T-shaped molecules based on x-ray crystallography data (18, 20, 45, 56). In contrast, other molecules that can crystallize in two or more structurally different forms are said to be flexible. But, as we have shown, hingeless light chain-tethered IgG3 molecules must be capable of exhibiting considerable flexibility to form both ring dimers (requiring near parallel arm) and the more open tetramers and larger ring forms. Moreover, these molecules display a range of Fab-Fab angles typical of hinge-intact Ig molecules. The term flexibility, as used to interpret crystallography, really indicates only that there is more than one static permissive orientation. As another example, polarization and spin-label studies show that IgM and IgE are relatively inflexible as compared with IgG. In this context, flexibility means the ability to jiggle (rapidly change their position and/or orientation), but gives no clue as to the relative orientation or manner of motion. As we have shown, these hingeless molecules can easily form ring dimers and can display a variety of Fab-Fab angles at levels greater than some IgGs. As pointed out above, IgM and IgE Fab arms may jiggle less rapidly, but may have a greater range of motion. A clear distinction should be made between crystal-packing flexibility (static permitted orientations), dynamic flexibility (movement through space over time) of molecules in solvent and what we might call dynamic permitted orientations derived from analyzing "snapshots" of individual molecules displaying a range of forms (Fab-Fab angular measurements), or competing to obtain a sterically restrictive conformation (i.e., ring dimers).
|
| Acknowledgments |
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| Footnotes |
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2 Address correpondence and reprint requests to Dr. Kenneth H. Roux, Department of Biological Science, Florida State University, Tallahassee, FL 30306-4370. E-mail address: ![]()
3 Abbreviations used in this paper: aa, amino acid; CDR, complementarity-determining region; LH, lower hinge; MH, middle hinge; NIP, nitroiodophenyl; NP, nitrophenyl; UH, upper hinge. ![]()
Received for publication March 31, 1998.
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