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Department of Pathology, Committees on Immunology and Cancer Biology, University of Chicago, Chicago, IL 60637
| Abstract |
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| Introduction |
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Epidemiologic analyses of humans suffering from IDDM have indicated in
most populations that the strongest association between disease
susceptibility and resistance maps to allelism in HLA-DQ (1, 8, 9, 10, 11, 12).
One feature that has been noted in those DQ molecules that predispose
individuals to diabetes is polymorphism at position 57 of the
ß-chain. This feature is shared by the class II molecule that is
expressed by the nonobese diabetic (NOD) mouse (13), which is a
well-defined animal model for IDDM (14, 15, 16, 17, 18). A change at position 57
(Asp to Ser or other uncharged amino acids) is thought to be of
particular significance, because such a change leads to the loss of the
potential for an interchain salt bridge with the class II
-chain
(19, 20, 21). A common structural feature shared by many diabetogenic class
II molecules suggests the possibility that there is a generalized
feature in the biochemistry of those class II molecules that
contributes to the autoimmune process.
There are two general types of biochemical events that polymorphism in class II might affect. First, sequence-dependent differences in the peptide-binding pocket of class II may select for diabetogenic peptides. Alternatively, these class II molecules may have atypical intracellular processing that allows them unique access to autoantigens or to defects in tolerance induction. In this study, we have evaluated the intracellular events that control peptide acquisition by class II and have focused on the ability of the NOD class II molecule to associate with DM glycoproteins. DM is thought to function primarily within the compartments of the endocytic pathway. The major known function of this protein is to release the invariant chain (Ii)-derived peptide segments that normally occupy the peptide-binding pocket of class II and to facilitate the peptide loading of class II in endosomal compartments (reviewed in Refs. 22 and 23). Recent studies indicate that DM may also facilitate the release of self or antigenic peptides from the class II molecule (24, 25, 26, 27), allowing for the selective accumulation of peptides that have a very stable interaction with the class II molecule. Because DM is a critical modulator of peptide binding to class II, it is important to determine whether the diabetes-prone class II molecules interact normally with this protein.
The findings that the I-Ag7 molecule does not form SDS-stable dimers, binds antigenic peptide in an unstable way, and rapidly turns over within cells (28) all suggest that this molecule may fail to interact productively with DM and consequently may not accumulate stably bound peptides. In the experiments presented in this paper, we have used gene transfer techniques to construct cells that express the NOD (I-Ag7) class II molecule and differ only in the expression of genetically defined Ii and DM proteins. This experimental design has allowed us to evaluate the contribution of MHC class II allelic polymorphism to the biochemical events that are associated with peptide acquisition by the class II molecule.
| Materials and Methods |
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Ltk- cells were transfected as we have
described previously (29) by CaPO4 precipitation with genes
encoding the I-Ad
and I-Ag7 ß (NOD),
I-Ad, or I-Ak. Cloned cells from these
transfections were screened for class II surface expression with mAb
and FACS, and positive clones were subsequently transfected with a
murine Ii (gIi) construct and/or the cDNAs for the Ma and Mb-1 chains
of H2-DM as we have described previously (24, 30). Clones from these
transfections were screened for the presence of Ii by Western blotting
and for DM mRNA by RT-PCR. All cells were maintained at 37°C and 10%
CO2 in DMEM containing 10% bovine calf serum plus 10 mM
HEPES, 4 mM glutamine, 0.1 mM nonessential amino acids, and 1 mM sodium
pyruvate (Life Technologies, Gaithersburg, MD) as well as
selective drug to maintain the expression of the transfected gene(s).
mAbs and flow cytometry
mAbs reacting with I-Ag7 and I-Ak (10.2.16) and with I-Ad (MKD6 and M5114.15.2) were obtained from the American Type Culture Collection (Manassas, VA). Cells secreting 40M, 39E, 40F, 40L, and 40B (31) as well as K24-199 (32) and the anti-Ii Ab In-1 (33) were provided by Jim Miller (University of Chicago). The cell surface expression of the MHC class II molecules was evaluated by flow cytometry as described previously (24, 30). Briefly, cells were incubated successively with mAbs and subsequently with secondary-step FITC-conjugated goat anti-mouse Igs (IgA, IgG, and IgM) (FITC-GAM) (Sigma, St. Louis, MO); cells were then analyzed on a FACScan cytofluorometer (Becton Dickinson, Sunnyvale, CA). Background fluorescence was determined by incubating cells with media alone or with an irrelevant mAb and then with FITC-conjugated goat anti-mouse Ig.
RT-PCR
Measurements of DM-specific mRNA were accomplished by RT-PCR as we have described previously (30). Briefly, cells were solubilized in YRLB buffer (0.5 M NaCl, 0.2 M Tris (pH 7.5), 10 mM EDTA, and 1% SDS) and then extracted twice with phenol/chloroform/isoamyl alcohol. RNA was precipitated with a 2.5-fold excess of 100% ethanol at -20°C overnight, pelleted, and dissolved in distilled water. A total of 2 µg of RNA was used in the reverse transcription reaction to obtain the cDNA. One-twentieth of the cDNA was used in the PCR; this amount is a substrate concentration that is within the linear range of amplification for both actin and H2-DM.
Western blot analysis
Cells were lysed in 6 mM CHAPS (3-([3-cholamidopropyl]dimethylammonio)-1-propanesulfonate), 150 mM NaCl, and 50 mM Tris (pH 7.8) plus 50 mM iodoacetamide and protease inhibitors (34). Postnuclear supernatants were incubated with class II mAbs that were bound to protein A-Sepharose (Pharmacia, Piscataway, NJ). Immunoprecipitated proteins were eluted from the protein A-Sepharose with 2% SDS, 10% glycerol, and 0.0625 M Tris (pH 6.8) at room temperature and were divided into two aliquots that were either maintained at room temperature or boiled for 3 min. Samples were electrophoresed on SDS-10% PAGE and transferred to nitrocellulose as described previously (34). Nitrocellulose membranes were blocked with a solution containing 5% dry milk in water and then probed with the mouse anti-I-Ak and I-Ag7 mAb (10.2.16) and/or the rat anti-I-Ad M5/114 mAb in 5% milk overnight. Bound Abs were detected by incubating the membranes with a mixture of anti-mouse- and/or anti-rat-conjugated horseradish peroxidase-linked secondary Abs. The blots were developed by chemiluminescence using LumiGLO (Kirkegaard & Perry Laboratories, Gaithersburg, MD). For Tris-Tricine immunoblots, the samples were fractionated on a 16.5% acrylamide gel for 20 h at 90 V as described previously (35) and then treated as described above, except that In-1 was used to detect Ii.
Metabolic labeling
For analysis of class II-associated Ii chain peptide (CLIP) binding to class II, cells were labeled overnight with 250 µCi/ml [35S]methionine (Amersham, Arlington Heights, IL), and class II molecules were isolated from detergent lysates by immunoprecipitation. Immunoprecipitated proteins were fractionated by SDS-12.5% PAGE; gels were treated successively for 20 min each with 30% methanol/10% acetic acid, H2O, and Flouro-Hance (Research Products, Mt. Prospect, IL), dried, and exposed to film at -70°C.
Ag-presentation assays
The OVA-specific, I-Ag7-restricted T cell hybridomas were derived by the fusion of OVA-specific T cells to the TCR-negative variant of the T cell lymphoma BW5147. The T cells that were used for fusion were derived by in vivo priming with 50 µl of 1 mg/ml OVA in CFA (Sigma) and maintained by subsequent restimulations in vitro with Ag and syngeneic splenocytes for 10 days. Fusion was performed at 3 days after antigenic stimulation. After cloning, Ag-specific cells were identified by coculture with OVA and NOD-derived spleen cell APCs. T cell Ag-presentation assays using I-Ag7-expressing transfectants were performed as described previously (29, 30). Briefly, 25,000 L cell transfectants were incubated with graded doses of OVA. A total of 50,000 T cell hybridomas were added to a final volume of 200 µl in flat-bottom, 96-well plates. After overnight coculture, supernatants were harvested, frozen, and tested for IL-2 content using the CTLL indicator and an MTT assay (3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl tetrazolium bromide) to detect viable cells after 16 h of culture of CTLL with the test supernatants.
| Results and Discussion |
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The NOD mouse expresses a unique MHC class II I-A molecule
(I-Ag7) that is composed of a unique ß-chain (17)
that has some structural similarity to I-Aßk and
I-Aßd (with the IDDM-associated change at Asp 57) and an
-chain identical with I-A
d. Previous experiments have
indicated that the I-Ag7 class II molecule binds peptides
in a relatively unstable manner (28). One measure of stable peptide
binding to the class II molecule is a resistance to SDS-induced chain
dissociation (36, 37). "SDS-stable" dimers can be detected in
unboiled samples as a 58- to 60-kDa protein form. Upon boiling, the
noncovalently linked
- and ß-chains dissociate and migrate as free
33-kDa and 28-kDa forms, respectively.
We analyzed I-Ag7 class II molecules isolated from NOD
spleen cells for their ability to form SDS-stable dimers. The
structurally related I-Ak molecule, which shares some mAb
epitopes with I-Ag7, was isolated from C3H spleen cells and
examined in parallel. Figure 1
shows the
results of this analysis. While I-Ak molecules form readily
detectable levels of SDS-stable dimers, the I-Ag7 molecules
isolated from NOD spleen cells were detected only as free chains in
both the boiled and unboiled samples and are thus primarily in an
SDS-unstable form. This finding is in agreement with previous results
indicating that the I-Ag7 class II molecules have low (38)
or undetectable (28) levels of SDS-stable dimers when expressed in NOD
(28, 38) or F1 animals (28) that express other class II
allelic products that display readily detectable SDS-stable dimers.
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- and ß-chains, 2) an inability of
the I-Ag7 peptide-binding pocket to stably bind peptide, or
3) a defect in intracellular events involved in stable peptide binding
to class II. To address the possibility that the intracellular
environment of NOD spleen cells is not conducive to SDS-stable dimer
formation, we assessed the biochemical properties of I-Ag7
in isolation from the other NOD-derived cellular processes. To
accomplish this, we introduced the genes encoding I-Ag7
into a homogeneous cell line expressing the components that are known
to allow Ag presentation and SDS-stable dimer formation for other
allelic forms of class II. Previously, we have described a transfection
model in which class II-negative L cell fibroblasts are reconstituted
successively with genes encoding the class II molecule and subsequently
with the known protein cofactors that participate in class
II-restricted Ag presentation (24, 30). For most allelic forms of class
II, SDS-stable dimer formation requires the participation of Ii and DM
glycoproteins (34, 39, 40, 41, 42). The genes encoding A
d and
Aßg7 were introduced into L cells and then
supertransfected with genes encoding the murine Ii and/or murine DM
molecules. This experimental design allowed us to independently assess
the function of Ii and DM proteins on the I-Ag7 molecule.
Figure 2
shows the characterization of
the cells used in this study. Figure 2
A represents surface
staining of the derived cells, in which the mAb 10.2.16 was used to
assess the plasma membrane expression of the I-Ag7 class II
molecule. This analysis indicated that the cells used in our studies
varied by less than twofold in the density of the class II molecules
expressed at the cell surface. The results of Western blotting with an
Ii-specific Ab are shown in Figure 2
B. The Ii glycoprotein
is not detectably expressed in the original cells used for transfection
but is expressed in the cells that were transfected with the gene
encoding this protein. Similarly, the RT-PCR analysis shown in Figure 2
C indicates that the mRNA expression of DM could be
detected in cells that had been transfected with cDNA constructs
encoding the
- and ß-chain genes.
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-chains, respectively. The MHC class
II molecules expressed by the transfectants were isolated from
detergent lysates using mAb that was specific for the class II dimer
and were analyzed by Western blotting for the presence of SDS-stable
dimer in the unboiled sample (Fig. 3
ß dimer reflects a structural
element controlled by polymorphic sequences within the
I-Ag7 molecule itself rather than altered cellular Ag
processing machinery expressed within NOD spleen cells.
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The preceding results indicate that the I-Ag7 molecule
fails to undergo the conformational changes upon peptide binding that
lead to resistance to SDS-induced denaturation. This phenotype is
reminiscent of the phenotype displayed by the class II molecules
expressed in the absence of the DM or Ii glycoproteins. Previous
experiments (28, 38) have indicated that the I-Ag7 molecule
does assemble with Ii. Our experiments (Fig. 4
B and data not shown) confirm
this observation and show that both p41 and p31 forms of Ii assemble
with the I-Ag7 molecule. Therefore, we considered the
possibility that the NOD class II molecule is unable to form SDS-stable
dimers because it fails to interact productively with DM. It now
appears evident that DM functions by direct interaction with the class
II molecule (43) at a site in close proximity to the peptide-binding
pocket (44). Thus, the failure to form SDS-stable dimers might reflect
a structural feature in the I-Ag7 molecule that precludes
an efficient interaction with DM. This was a particularly important
question based on the finding that the peptides bound to the NOD class
II molecule displayed unusually rapid off-rates (28). A failure to
accumulate high-affinity peptides could be accounted for by a failure
to interact productively with DM.
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DM expression in APCs has been shown to affect class II structure,
which can be detected by changes in mAb epitopes (45, 46, 47). To
evaluate whether the structure of the I-Ag7 molecule is
influenced by DM, we tested the I-Ag7 transfectants for
their reactivity with a panel of anti-class II mAbs. Table I
shows a summary of the flow cytometry
results; the reactivity of the mAb with I-Ak is shown for
comparison. Three cross-reactive mAbs, 10.2.16, 40M, and 39E, reacted
strongly with the I-Ag7 molecule, as did an
anti-A
d mAb (K24199). Other Abs that react with
Aßk (40F and 40L) or cross-react with many allelic and
isotypic forms of class II (40B) did not react with the
I-Ag7 molecule (data not shown). This serologic analysis
was consistent with protein sequence data (17) indicating that the NOD
class II molecule is related to and yet distinct from other class II
molecules. When the flow cytometry data was examined for relative
reactivity of the mAb for the I-Ag7 molecule, we found that
40M (and 39E) displayed higher staining relative to 10.2.16 (which
recognizes a linear sequence in many class II ß-chains) in cells that
express Ii and DM. In the experiment shown, calculating the ratio of
the mean fluorescence intensity (MFI) obtained with 40M to that
obtained with 10.2.16 results in a value of 0.9 for the cells
expressing Ii alone, whereas the ratio for the cells expressing DM with
Ii is 1.20. In seven experiments where these cells were examined in
parallel by flow cytometry, the relative expression of these epitopes
on the DM/Ii-positive I-Ag7 cells was 1.3-fold higher (±
0.076) than that obtained with the cells that expressed Ii but lacked
DM. This analysis suggested that a conformational change was induced in
I-Ag7 when the Ii-positive cells expressed the DM protein.
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Role of DM in accumulation of peptide/class II complexes
Despite the productive interactions with Ii and DM that are
evident in the preceding assays, SDS-stable I-Ag7 dimers
were not detected in cells expressing these class II protein cofactors.
There are several possibilities that could explain this result. First,
the interactions between the I-Ag7 ß-chain and the
I-Ad
-chain may be inherently less stable than other
class II molecules and may allow SDS-induced dissociation irrespective
of peptide occupancy. Alternatively, this class II molecule may indeed
have a generalized deficiency in stable peptide binding. With regard to
this last possibility, it is important to note that the biochemical and
serologic data provided thus far provide insight into only one of two
functions that are displayed by DM in vitro, which is removal of Ii
fragments. Although this is the most well-documented function of DM,
there is now increasing evidence that DM functions to enhance peptide
loading onto class II, which allows for the accumulation of stably
bound peptides (25, 26, 27, 48). DM is often likened to an enzyme (25), and
as such it is unusual in that it readily facilitates both the forward
(removal of CLIP) and the "backward" reaction (reloading of
peptide) with most class II substrates.
To explain the failure of I-Ag7 to acquire SDS-stability
despite its apparent ability to interact with DM, we considered the
possibility that the interaction of DM with the I-Ag7 class
II allows the release of unstable peptides such as CLIP while not
concomitantly allowing accumulation of stably bound peptides. Such an
interaction would account for the low levels of the SDS-stable dimers
detectable for this class II allele. To examine this possibility, we
sought to test the role of DM in class II-restricted Ag presentation by
the I-Ag7 class II molecule. To accomplish this,
Ag-specific T cells were derived that were restricted to the
I-Ag7 molecule. NOD mice were immunized with chicken OVA
(cOVA) in CFA. After priming, lymph node T cells were reactivated in
vitro with Ag and then fused to the BW5147 thymoma to allow for the
immortalization of the Ag-specific T cells. OVA-specific,
I-Ag7-specific T cell hybridomas were identified after
subcloning and were tested for reactivity on the panel of APCs that
varied only in Ii and DM expression. Typically, at least two APC clones
of a given genotype were analyzed in any given assay. Figure 5
shows a representative result from
these analyses. Two types of reactivity were identified in these
experiments. One set of T cells, exemplified by 83.9 and 35.3 (Fig. 5
, A and B), recognized peptides whose
expression with class II was not detectably affected by Ii and DM
expression within the APC. A separate set of T cells, represented by
97.4 and 96.4 (Fig. 5
, C and D),
recognized epitopes whose expression with the NOD class II was enhanced
when the APC expressed Ii and were further enhanced by additional
expression with DM. Compared with the cell lacking the expression of Ii
and DM, the DM/Ii-positive cells demonstrated a 500-fold shift in their
Ag dose-response curve. Also worthy of note is the ability of DM
expression alone to facilitate Ag presentation for these clones. These
results indicate that DM can facilitate the accumulation of at least
some peptides on the NOD class II molecule.
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Of particular interest to us is the conformation change detected on the I-Ag7 molecule when the APCs express DM. This conformation change is most likely related directly to CLIP release and may require a substitution with structurally distinct peptides, an event that is likely to be facilitated by DM. An analysis of the crystal structure of the CLIP/class II complexes indicates that one region of DR3 is altered when it is bound by CLIP as opposed to when it is bound by antigenic peptide (54). Our serologic and biochemical studies raise the possibility that such conformational alternatives may exist for the I-Ag7 molecule depending upon the sequence of peptides occupying the binding groove of the class II molecule. We hypothesize that a structural feature of the CLIP peptide precludes the conformation that is preferred by the mAb 40M. DM-mediated loading may allow the binding of peptides offering motifs that drive a more stable interaction with the class II molecule or a conformation of the I-Ag7 molecule that is better recognized by the 40M and 39E mAbs. Peptide-sequencing (55) and peptide-binding (38, 56) studies have shown that some antigenic peptides and self peptides can accumulate on the I-Ag7 class II molecule despite the relatively unstable binding of certain antigenic peptides. In fact, peptide-sequencing studies and a sequence comparison of the peptides that are presented by the I-Ag7 molecule indicate that this class II molecule may selectively bind peptides that possess a negatively charged residue at their carboxyl terminus and consequently have the potential to neutralize the unpaired, positively charged residues that are unique to this class II molecule (38, 55). However, although such peptides may have a relatively stable interaction with I-Ag7, they apparently do not protect the I-Ag7 molecule from SDS-induced denaturation. Collectively, our results suggest that although the I-Ag7 molecule undergoes conformational changes that are induced by the exchange of CLIP for self or antigenic peptides in the presence of DM, this class II molecule may possess unique conformational features that render it particularly susceptible to SDS-induced denaturation. Our biochemical, functional, and serologic data suggest that the conformational features of I-Ag7 that are associated with weak peptide binding and with a sensitivity to SDS-induced chain dissociation do not reflect a nonproductive interaction with the DM protein.
| Acknowledgments |
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| Footnotes |
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2 Address correspondence and reprint requests to Dr. Andrea J. Sant, Department of Pathology, Committees on Immunology and Cancer Biology, University of Chicago, 5841 S. Maryland Avenue, MC1089, Chicago, IL 60637. E-mail address: ![]()
3 Abbreviations used in this paper: IDDM, insulin-dependent diabetes mellitus; NOD, nonobese diabetic; Ii, invariant chain; CLIP, class II-associated invariant chain peptide; cOVA, chicken OVA; MFI, mean fluorescence intensity. ![]()
Received for publication February 27, 1998. Accepted for publication May 14, 1998.
| References |
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ß dimers and facilitates peptide loading. Cell 82:155.[Medline]
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