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*
MRC-CSC, Hammersmith Hospital, and
Department of Crystallography, Birbeck College, London, United Kingdom; and
Wadsworth Center for Laboratories and Research, Albany, NY 12201
| Abstract |
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| Introduction |
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Peptides that enter the ER independently of TAPs, such as cleaved leader sequences, can induce assembly of class I molecules in TAP-deficient cells (6). It has also been shown that the expression of some class I molecules is intrinsically TAP independent (7, 8). The class I-like molecules CD1 and TL can both be expressed on the surface of cells lacking a functional TAP transporter, and there is increasing evidence that they may acquire antigenic epitopes in intracellular compartments other than the ER (9, 10).
Mouse Qa-1 is one of a group of class I molecules designated as nonclassical or class Ib histocompatibility Ags, and that elicits strong CTL responses (11). At least two other members of this group, CD1 and H-2 M3, are involved in the presentation of bacterial and mycobacterial Ags to T cells (12, 13). Qa-1b is expressed in many mouse tissues, associates with ß2m, and can present peptide Ags to CTL (11). Previous studies have shown that some CTL can recognize Qa-1b on cells defective in TAP function (14).
Maturation of class I molecules has usually been studied using alloantibodies that recognize correctly folded heterotrimers of Hcs, ß2m, and peptide. More recently, alternative conformations of class I molecules, including precursor forms as well as cell surface molecules, have been described using other Hc-specific Abs (15). We have produced rabbit antisera against unique peptide sequences present in the cytoplasmic domain of Qa-1b. These antisera do not cross-react with other mouse class I molecules, and recognize both correctly folded and conformationally altered Qa-1b molecules. By comparing the reactivity of alloantiserum with peptide-specific Abs, we have identified two forms of Qa-1b that differ in their association with ß2m and with other components of the maturation pathway.
| Materials and Methods |
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Alloantiserum specific for Qa-1b was produced by immunization of B6.Tlaa x A strain mice with cells from A.Tlab. Anti-KSFQ (anti-Qa-1b polyclonal) was produced by immunizing New Zealand White rabbits with the peptide KSFQKDAMLMF. Hybridoma cells producing monoclonal anti-Kb (34.2.12) and anti-Kk (16.3.1) were obtained from the American Type Culture Collection (Rockville, MD).
Cloning and expression of Qa-1b/Ld
A genomic clone of H-2Ld carrying the regular
H-2 promoter region was kindly provided by Dr. A. Mellor. The
Qa-1b/Ld construct was made by introducing the
1 and
2 domains of Qa-1b into
the Ld gene as described previously for the
Qa-1b/Dd construct (16). The construct was
cloned into pBR327 and the linearized DNA was used to transfect L
cells. Cells were grown in RPMI 1640 (Life Technologies, Grand Island,
NY) containing 10% FCS, 50 IU/ml penicillin, 50 IU/ml streptomycin,
and 2 mM glutamine (complete medium) at 37°C in 5%
CO2.
Biosynthetic labeling and immunoprecipitation
CBA mouse spleen cells were cultured for 40 to 50 h with 2 µg/ml of Con A in complete medium containing 1 mM 2-ME. For labeling, 2 x 107 cells were washed three times at room temperature in RPMI medium lacking methionine and cysteine and containing no additives. A total of 200 µCi of Pro-Mix, [35S](methionine + cysteine) (Amersham, Little Chalfont, U.K.) was added and cells were incubated for 10 min at 37°C. After labeling, cells were either placed on ice, or chased in complete medium for appropriate times.
Labeled cells were washed once in ice-cold isotonic TBS to remove radioisotopes, and lysed in 1 ml of PBS containing 1% Triton X-100 (Pierce, Chester, U.K.), proteinase inhibitors, and 10 mM iodoacetamide. After 10 min on ice, lysates were centrifuged at 20,000 x g in a Sigma (St. Louis, MO) refrigerated bench microfuge. Cleared lysates were then treated with protein A beads and unimmunized serum (mouse or rabbit) at 4°C overnight. Protein A beads preloaded with specific antiserum were rotated at 4°C with precleared lysates for 2 h, and then harvested at 100 x g. After extensive washing, immunoprecipitates were treated with SDS containing sample buffer at 95°C with or without 10 mM DTT. Samples were then subjected to electrophoresis on 12% polyacrylamide gels, treated with autoradiographic enhancers (Amplify, Amersham, U.K.), dried, and autoradiographed on Kodak BioMax MR film.
Surface labeling with 125I
Cells, 2 x 107, were washed thoroughly in cold PBS and suspended in 200 µl of PBS on ice. A total of 5 µl of 1 mg/ml of lactoperoxidase solution was added followed by 5 µl of a dilute hydrogen peroxide solution (30 vol diluted 1:104). Labeling was started by adding 10 µl (1 mCi) of [125I]Na solution (Amersham) and removing the tube from the ice. The reaction was continued for 30 min, adding 5 µl of dilute hydrogen peroxide solution at 10-min intervals. Cells were then washed in PBS containing 1 mM sodium iodide and lysed. 125I-labeled samples were visualized using Kodak BioMax MS film using an appropriate intensifying screen.
Pulse-chase analysis
Cells labeled with [35S]methionine for 5 min were diluted to 7 ml with warm complete RPMI medium in a 10-ml polypropylene tube, and 1 ml was removed and placed immediately in ice. This chase suspension was maintained at 37°C with occasional mixing, removing samples at 30-min intervals. Lysis and immunoprecipitation were performed as described above, and then immunoprecipitates were treated with Endo (endoglycosidase) H (Boehringer Mannheim, Mannheim, Germany) according to the manufacturers instructions before gel electrophoresis.
Two-stage immunoprecipitation
First, immunoprecipitates were treated with 20 µl of 1.0% SDS at 95°C for 5 min with or without 1 mM DTT. Then, 1 ml of PBS containing 1% Triton X-100 (Pierce) was added and the beads removed. The supernatant containing the released Ag was then subjected to a second round of immunoprecipitation using protein A beads preloaded with Ab. Samples were then subjected to gel electrophoresis under reducing conditions.
Fractionation of metabolically labeled lysates by size exclusion chromatography
CBA spleen cell blasts were metabolically labeled for 20 min as described above and lysed in PBS containing proteinase inhibitors and 1% digitonin. Lysates were centrifuged at 20,000 x g for 15 min and precleared with unimmunized serum. Precleared lysates were loaded onto a Superose 6 size exclusion gel filtration column (Pharmacia, St. Albans, U.K.) equilibrated with PBS containing 1% digitonin and run at a flow rate of 0.25 ml/min. The column was calibrated using gel filtration protein standards (Bio-Rad, Hemel Hempstead, U.K.), thyroglobulin (670 kDa), bovine gamma globulin (158 kDa), and chicken OVA (44 kDa). One-milliliter fractions were collected and each fraction subjected to immunoprecipitation with protein A beads preloaded with specific antiserum/Ab at 4°C for 4 h. After three washes in digitonin-containing PBS buffer, samples were analyzed by gel electrophoresis under reducing conditions.
| Results |
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To visualize Qa-1b molecules, Con
A-activated CBA mouse spleen cells (H-2k,
Qa-1b) were either metabolically labeled with
[35S]methionine or surface labeled with 125I.
Cell lysates were treated either with an anti-Qa-1b
alloantiserum or with a rabbit antiserum prepared against a
Qa-1b cytoplasmic peptide motif (anti-KSFQ) and protein
A beads. Immunoprecipitates were subjected to gel electrophoresis under
reducing conditions and the results shown in Figure 1
, A and B. Both
reagents detect Qa-1b Hcs, but in very different amounts.
This was not due to differences in Ab titer, since Ab was always
present in excess. Interestingly, both reagents coprecipitated equal
amounts of ß2m. Similar results were obtained with
metabolically labeled (Fig. 1
A) and surface-labeled
(Fig. 1
B) cells. When lysates were extensively
precleared with the alloantiserum, all of the
ß2m-associated Hcs were removed (Fig. 1
C). However, Hcs devoid of ß2m were
still detectable using the anti-KSFQ Ab (Fig. 1
C). To investigate whether anti-KSFQ Ab might
cross-react with proteins other than Qa-1b, it was tested
on lysates of [35S]methionine-labeled B10.BR
(H-2k, Qa-1a) spleen cells. No 40- to 50-kDa
material was immunoprecipitated from these lysates (data not shown),
indicating that all of the labeled 40- to 50-kDa material detected with
anti-KSFQ was associated with Qa-1b. These results
suggested that CBA lysates contain two serologically distinguishable
forms of Qa-1b Hcs. One is a stable
Qa-1b/ß2m heterodimer recognized both by the
alloantiserum and by anti-KSFQ. There are also Qa-1b
Hcs present that contain little or no ß2m and are
recognized only by anti-KSFQ. It also shows that a
significant proportion of the Qa-1b does not form a stable
association with ß2m.
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To examine the intracellular trafficking of Qa-1b
molecules, CBA spleen cell blasts were labeled for 10 min with
[35S]methionine and chased for various times in medium
containing excess unlabeled methionine. Precleared lysates were treated
with anti-KSFQ and maturation of Qa-1b monitored by
treatment with the glycosidase Endo H to monitor the conversion of
immature, high-mannose, carbohydrates to complex forms. As shown in
Figure 2
A, Endo H-sensitive
Qa-1b molecules have a half-life of about 60 min before
becoming resistant. The half-life of immature carbohydrates on
H-2Kk molecules in the same cells was less than 30 min
(Fig. 2
B). Samples from the pulse-chase analysis were
also investigated by electrophoresis under nonreducing conditions.
Without reduction of the samples, high m.w. forms of Qa-1b
were found immediately after the labeling pulse, and were increased in
quantity during the chase period (Fig. 2
C). Potential
artifacts due to oxidation occurring in the lysate were minimized by
including iodoacetamide in the lysis buffer. No high m.w. forms of
H-2Kk molecules were found in the same lysate (data not
shown). These results show that some Qa-1b molecules form
disulfide-linked complexes early in the maturation pathway.
|
CBA spleen cells were surface-labeled and lysates were
treated with either the alloantiserum or with anti-KSFQ. To reduce
the complexity of the gel patterns, N-linked carbohydrate
side chains were removed by treatment of immunoprecipitates with
endoglycosidase F (Endo F). Endo F treatment of labeled material
isolated using the alloantiserum reduced the size of Qa-1b
Hcs to a single band of 35 kDa, consistent with removal of the two
N-linked carbohydrate chains. However, Endo F treatment of
anti-KSFQ immunoprecipitates revealed the 35-kDa Hc band and an
additional component of 37 kDa (Fig. 3
A). The 37-kDa
component was not eliminated by extended treatment with excess Endo F
and is not, therefore, a consequence of incomplete carbohydrate
removal. To determine whether the 37-kDa polypeptide was synthesized
internally, cells were labeled with [35S]methionine for
1 h and a similar immunoprecipitation conducted. Very little
37-kDa material was detectable after a 1-h label, but if cells were
labeled continuously for 5 h with [35S]methionine,
37-kDa material was clearly detectable using anti-KSFQ (Fig. 3
B). This indicates that the 37-kDa
Qa-1b-associated polypeptide is indeed synthesized by the
cells but either has a slow turnover rate or a large intracellular pool
size. Since the fully glycosylated cell surface form of the 37-kDa
polypeptide is approximately 44 kDa, it has been called gp44.
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1 and
2 domains of Qa-1b linked to the
3 domain of H-2Ld was also examined.
Transfected L cells expressing the hybrid molecule were surface labeled
with 125I and lysates treated with either
anti-Qa-1b alloantiserum or with the 28.14.8 Ab, which
is specific for the
3 domain of H-2Ld. The
hybrid molecule showed a weak ß2m association similar to
native Qa-1b. However, since the hybrid
Qa-1b/Ld Hc carries an additional
N-linked carbohydrate chain, it is 2 to 3 kDa larger than
Qa-1b. As shown in Figure 3
3-specific Ab 28.14.8 reveals the hybrid class I Hc and
gp44, which are clearly distinguishable without Endo F treatment.
Consistent with previous data, the anti-Qa-1b
alloantiserum detect only the hybrid Hc, indicating that Hcs associated
with gp44 are not recognized by alloantibodies. This result shows that
gp44 is detectable using Abs other than anti-KSFQ.
To investigate further the nature of the association between
Qa-1b and gp44, a two-stage immunoprecipitation experiment
was performed. Lysates of surface-labeled cells were treated with
anti-KSFQ and immunoprecipitates washed as before. Labeled
polypeptides were then released from the immunosorbent with a hot SDS
solution, fresh lysis buffer added, and the eluted material treated a
second time with anti-KSFQ on protein A beads. Finally, the samples
were treated with Endo F and subjected to gel electrophoresis. As shown
in Figure 4
, when immunosorbents from the
first immunoprecipitation were treated with SDS alone,
Qa-1b and gp44 remain associated in the second round (Fig. 4
, lane 1). If, however, the reducing
agent DTT is included in the first SDS retrieval step, gp44 does not
reappear in the second immunoprecipitate (Fig. 4
, lane
2). This indicates that Qa-1b and gp44
are disulfide linked. It also shows that anti-KSFQ does not
recognize gp44 directly but does so only by virtue of its association
with Qa-1b.
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It has been previously reported that T cells can recognize
Qa-1b in a TAP-dependent or a TAP-independent way
(14). This implies that Qa-1b molecules can reach the cell
surface in the absence of TAP molecules. To test this, activated spleen
cells from TAP1-deficient mice (H-2b, Qa-1b)
were surface labeled and lysates prepared as before. Using
anti-KSFQ, Qa-1b was easily detectable by
immunoprecipitation (Fig. 5
A,
lane 2). Surface forms were also detected
using the alloantiserum (data not shown). In contrast, only low levels
of H-2Kb were found in the same lysates (Fig. 5
A, lane 4). Pulse-chase
analysis showed that a significant proportion of Qa-1b
molecules are processed to Endo H-resistant forms in TAP1-deficient
cells, indicating that intracellular transport of Qa-1b
occurs in the absence of TAP function (Fig. 5
B).
|
It has been shown recently that class I molecules associate
transiently in the ER with a protein complex consisting of the
molecular chaperons calnexin and calreticulin, another molecule called
tapasin, and the TAP1/TAP2 heterodimer, as a prelude to peptide loading
(17). To investigate a possible physical association between
Qa-1b and the TAP machinery, lysates of metabolically
labeled CBA blasts were fractionated by size-exclusion chromatography
in digitonin-containing buffer to preserve weak molecular associations.
Fractions were then treated sequentially with anti-KSFQ and 16.3.1
to detect Qa-1b and H-2Kk, respectively. The
results are shown in Figure 6
. Using this
methodology, we were able to detect class I molecules associated with
different molecular mass ranges. Some H-2Kk was found in
complexes with molecular masses above the 670-kDa marker, possibly
representing molecules associated with the TAP machinery (Fig. 6
A). H-2Kk molecules were also found in
complexes with molecular masses below the 158-kDa standard marker,
probably representing assembled heterotrimeric complexes of Hc,
ß2m, and peptide. In contrast, Qa-1b was
found in complexes with molecular masses in the range of 100- to
300-kDa only, and not in the high molecular mass complexes that contain
H-2Kk (Fig. 6
B). The presence of material
in the 300- to 400-kDa range in Figure 6
B indicates some
variability in the composition of Qa-1b-containing
complexes. In a separate experiment, anti-TAP1 immunoprecipitates,
in digitonin-containing buffer, of metabolically labeled CBA lysates
were eluted and reprecipitated with anti-KSFQ. No Qa-1b
molecules were found (data not shown), consistent with their failure to
strongly associate with TAPs.
|
Our results show that ß2m is not associated
with a large proportion of Qa-1b Hcs in CBA cells. This
suggested that Qa-1b expression might be independent of
ß2m. We therefore examined the maturation and cell
surface expression of Qa-1b in ß2m-deficient
mice by pulse-chase analysis. We were unable to detect any Endo
H-resistant forms of Qa-1b in ß2m-deficient
mice, and Endo H-sensitive Hcs disappear during the chase period (Fig. 7
). Furthermore, no cell surface
Qa-1b was detectable by surface labeling (data not shown).
These results show that, without ß2m, Qa-1b
is rapidly degraded. They also show that, once the Hcs have undergone
their initial folding step, ß2m is no longer essential
for subsequent maturation and stable cell surface expression.
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| Discussion |
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An interesting and special feature of Qa-1b is its ability to bind the nonamer peptide, AMAPRTLLL, derived from the leader sequences of H-2D and H-2L class I molecules, in preference to other peptides (11). Recently, peptide elution studies show AMAPRTLLL indeed to be the major peptide bound, with very few others detected (16, 22). In this study, we have shown that, as expected, association of Qa-1b with ß2m is poor in CBA (H-2k) mice that lack AMAPRTLLL. We were, however, surprised to find that, despite poor ß2m association, Qa-1b molecules do not undergo rapid proteolysis, but rather traffic normally and are stably expressed on the cell surface. These cell surface Qa-1b molecules, which lack ß2m and did not react with our conformation-dependent alloantiserum, were detected with the conformation-independent peptide-specific antiserum (anti-KSFQ). This suggests that, if AMAPRTLLL is not present, Qa-1b adopts an alternative stable conformation.
It is widely accepted that trafficking and maturation of class I Hcs involves the recruitment of several accessory molecules. One of these is calnexin, an ER resident lectin-like chaperone, to which nascent Hcs bind cotranslationally and remain bound while they undergo correct folding upon acquisition of ß2m. On subsequent binding to the TAP machinery and on binding peptides they are then released and bound for the cell surface. It should be noted that recent studies have shown that, in calnexin-deficient cells, rates of class I Hc maturation were not affected, suggesting that other ER molecular chaperons can perform the same job (23, 24). One possible explanation for the weak association between Qa-1b and ß2m observed here is that Hcs are capable of folding correctly independently of ß2m. This is not clearly the case, since Qa-1b Hcs are rapidly degraded in ß2m-deficient mice, and cell surface labeling experiments showed them to be absent. Therefore, Qa-1b molecules appear to share the same ß2m-dependent initial folding steps as other class I molecules, but subsequent ß2m association appears not to be essential for their trafficking and maturation. An exception to the ß2m-dependence rule is H-2Db, which is expressed on the surface of cells from ß2m-deficient cells, although at low levels (18).
Previous studies have shown that, in cells defective in TAP expression and function, the rate of intracellular transport of class I molecules is reduced, possibly because calnexin remains associated for longer with Hc-ß2m heterodimers (25). Our pulse-chase experiments show that Qa-1b becomes Endo H resistant 60 to 90 min after synthesis, much slower than H-2Kk molecules, which become resistant within 30 min. Similar rates of maturation and cell surface expression of Qa-1b were observed in both normal and TAP1-deficient mice. Cell surface expression of most class I molecules in TAP-deficient cells is generally low, since Hc-ß2m dimers without peptide are unstable. However, Qa-1b molecules are abundant and stable on the cell surface in TAP1-deficient mice. In this respect, Qa-1b resembles the class Ib molecules TL and CD1 (7, 8). Earlier work has shown that CTL recognition of Qa-1b is not dependent on TAPs (14, 26). Paradoxically, many Qa-1-specific CTL recognize their targets in a TAP-dependent manner, possibly reflecting a requirement for the transporter in delivering peptide epitopes into the lumen of the ER. Our results, therefore, clearly distinguish the dual roles of TAP molecules in the assembly of class I molecules and in the delivery of peptides.
It is not unusual for free class I Hcs to form either homodimers or
associate with additional proteins. Indeed, this may be a way to
stabilize free Hcs that would otherwise be targeted for degradation.
Wolf and Cook reported that Qa-1b Hcs associate with free
H-2Ld Hc and with another unidentified molecule, Qsm, and
in doing so exclude ß2m (27). In their experiments, no
additional molecules were detected in H-2k strains. In
contrast, our results demonstrate another polypeptide, gp44, which
associates with Qa-1b in H-2k and
H-2b strains. Using biosynthetic labeling, gp44 labels
poorly, and is therefore difficult to detect. Also, if carbohydrates
are not removed, gp44 was difficult to distinguish from
Qa-1b on SDS-PAGE due to the closeness of their polypeptide
chain sizes. It was, in contrast, easy to distinguish
Qa-1b/Ld Hc from gp44 since the extra
carbohydrate on the chimeric class I Hc reduces substantially its
SDS-PAGE mobility (Fig. 3
C). This experiment also
demonstrates that the
3 domain of Qa-1b is
unimportant for gp44 association.
Evidence that gp44 is a novel molecule comes from the following observations. First, gp44 associates with Qa-1b in mice deficient in the class II-associated invariant chain (data not shown). Second, other known accessory molecules in the TAP pathway, e.g., calreticulin (28), ectocalreticulin (28), and tapasin (29, 30) have higher molecular masses: 52 kDa, 62 kDa, and 47.5 kDa, respectively. And third, preliminary N-terminal sequence analysis of gp44 appears to exclude other known class I Hcs (H. Djaballah and P. J. Robinson, unpublished observations). It is not yet clear whether gp44 is membrane bound; further characterization is under way.
All class I molecules have four conserved cysteine residues that
form two intrachain disulfide bonds,
Cys101-Cys164 and
Cys203-Cys259. The additional cysteine residue
at position 114 of Qa-1b is located on one of the ß
strands at the base of the peptide-binding cleft, making it solvent
accessible and able to form a disulfide bridge with free cysteine
residues on gp44 (Fig. 8
). A cysteine
residue at this position of class I Hcs is unusual. Although some mouse
class I molecules have a free cysteine residue at position 121, this is
less likely to form disulfide bridges because of poor solvent
accessibility. However, this may account for the formation of
disulfide-linked homodimers observed previously (31). Cysteine residues
are also present in the cytoplasmic domains of several class I Hcs,
including Qa-1b. However, the reducing
environment of the cytoplasm effectively rules out formation of
disulfide bridges in vivo involving cytoplasmic cysteine residues. In
addition, we find no evidence for dimers of Qa-1b, but
detect larger complexes that form within minutes of Hc synthesis and
contain gp44. One might predict that formation of such complexes may
not allow a good contact between the Hcs and the TAP molecular complex.
Our gel filtration studies showing that Qa-1b and
H-2Kk are present in different molecular mass fractions is
consistent with this hypothesis.
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| Acknowledgments |
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| Footnotes |
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2 Address correspondence and reprint requests to Dr. Peter J. Robinson, Transplantation Biology Group, MRC-CSC, Imperial College School of Medicine, Hammersmith Hospital, Du Cane Road, London W12 ONN, U.K. E-mail address: ![]()
3 Abbreviations used in this paper: ER, endoplasmic reticulum; Hc, heavy chain; ß2m, ß2-microglobulin; Endo, endoglycosidase. ![]()
Received for publication September 29, 1997. Accepted for publication December 5, 1997.
| References |
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