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The Journal of Immunology, 1998, 160: 890-897.
Copyright © 1998 by The American Association of Immunologists

Recognition of an Antigenic Peptide Derived from Tyrosinase-Related Protein-2 by CTL in the Context of HLA-A31 and -A331

Rong-Fu Wang2,*, Samuel L. Johnston*, Scott Southwood{dagger}, Alessandro Sette{dagger} and Steven A. Rosenberg*

* Surgery Branch, National Cancer Institute, National Institutes of Health, Bethesda, MD 20892; and {dagger} Cytel Corp., San Diego, CA 92121


    Abstract
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
Tumor-infiltrating lymphocytes (TILs) derived from tumor-bearing patients recognize tumor-associated Ags presented by MHC class I molecules. The infusion of TIL586 along with IL-2 into the autologous patient with metastatic melanoma resulted in the objective regression of tumor. Two T cell epitopes derived from tumor Ags, tyrosinase-related protein (TRP)-1 and TRP-2, were shown to be recognized by HLA-A31 restricted TIL586 and its T cell clones. In this study we tested the hypothesis that these two peptides can be recognized by CTL from non-HLA-A31 patients with melanoma. It was found that both peptides were capable of binding to HLA-A3, -A11, -A31, -A33, and -A68 of the HLA-A3 supertype. Importantly, we found that HLA-A33-positive TIL1244 and its T cell clones can recognize TRP197–205 presented by both HLA-A31 and -A33 molecules, suggesting that a single TCR can recognize peptide/A31 and peptide/A33 complexes. However, peptide titration experiments showed that the affinity of TCR receptor to peptide/A33 could be higher than that to the peptide/A31. These studies have important implications for the development of peptide-based cancer vaccines.


    Introduction
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
Tcells play an important role in the surveillance and elimination of cancer cells in both human and animal models (1). To understand the molecular basis of T cell-mediated antitumor responses, a number of genes have been identified that encode tumor Ags recognized by T cells (2, 3, 4, 5, 6, 7). Although the majority of these tumor Ags, including MAGE-1 (8), MAGE-3 (9), GAGE (10), BAGE (11), MART-1/melan A (12), gp100 (13), tyrosinase (14), TRP-13/gp75 (15), and TRP-2 (16), isolated from melanoma were found to be self-Ags, a few mutated forms of tumor Ags were identified as well (17, 18, 19).

We have recently shown that tumor Ags, TRP-1/gp75 and TRP-2, are recognized by the HLA-A31-restricted TIL586, which has been shown to result in tumor regression when infused along with IL-2 into the autologous patient with melanoma (15, 16). The gp75 epitope was unexpectedly found to be derived by translation of an alternative open reading frame of the gp75 gene, while the T cell epitope for TRP-2 was encoded by the normal open reading frame of the TRP-2 gene (20). Recognition of these antigenic peptides by TIL586 and its derived CTL clones was shown to be HLA-A31 restricted. Given the relatively low frequency of the HLA-A31 allele in major ethnic groups, broad utilization of these antigenic peptides in immunotherapy would be limited.

In the last few years, significant progress has been made toward understanding the rules governing peptide binding to MHC class I molecules, the so-called peptide binding motifs (21). Based on the structural similarities of a group of HLA alleles, peptide binding motifs, sequencing analysis of pools of naturally processed and endogenously bound peptides eluted from MHC class I molecules, and peptide binding assays, several supertypes were proposed: the HLA-A2-like, -A3-like, and -B7-like (22). The A3-like supertype includes the alleleic products of at least five of the most common HLA-A alleles: A3, A11, A31, A33, and A68.

In the present study we sought to expand the potential population coverage of TRP-1- and TRP-2-derived epitopes by testing the hypothesis that a particular peptide not only can bind to more than one type of HLA allele, but can still be recognized by CTL. As the first step, we demonstrate here that the antigenic peptides of TRP-1 and TRP-2 can bind to HLA-A3, -A11, -A31, -A33, and -A68. After screening 13 TILs (possibly restricted by HLA-A3, -A11 and -A33), one HLA-A33-restricted TIL1244 was identified that recognized the TRP197–205 in the context of both HLA-A31 and-A33, suggesting that a single TCR can recognize a tumor-specific self-peptide presented by two different HLA-A alleles. These findings indicate that the TRP-1 and TRP-2 antigenic peptides can be used for the development of peptide-based vaccines for the treatment of melanoma patients expressing not only HLA-A31, but also HLA-A33. Based on their good peptide binding affinities, it is also possible to use TRP197–205 or ORF3P to raise CTL from patients expressing HLA-A3, -A11, and -A68.


    Materials and Methods
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
Chemicals and reagents

The following chemicals and reagents were purchased from the sources indicated: RPMI 1640 medium, AIM-V medium, Lipofectamine, and G418 from Life Technologies (Gaithersburg, MD); the eukaryotic expression vector pCR3 from Invitrogen (San Diego, CA); anti-HLA-A31 and anti-HLA-A33 mAbs from One Lambda (Canoga Park, CA); and anti-IgM Ab conjugated with FITC from Vector Laboratories, Inc. (Burlingame, CA).

T cell clones and lines

TIL586 and TIL1244 were isolated separately from tumor specimens of patients with metastatic melanoma and grown in medium containing IL-2 (6000 IU/ml; Chiron, Emeryville, CA) for 32 to 60 days as previously described (23). TIL586 and TIL1244 were predominantly CD8+ T cells. The T cell clones were generated by limiting dilution methods (at one cell per well) from the TIL1244 cell line using irradiated allogeneic PBL (1 x 103 cells/well) as feeder cells in RPMI 1640 medium containing 10% human AB serum and 500 IU of IL-2. After 12 days, T cell clones were expanded in AIM-V medium containing 6000 IU/ml IL-2. To obtain optimal expansion, we used the OKT3 expansion method described by S. Riddell (24). Briefly, on day 0, 5 x 104 to 5 x 105 T cells were cocultured with HLA-A33+ PBL (500:1, PBL:T cell ratio) and 1500EBV B cells (100:1, EBV:T cell ratio) in 25 ml of RPMI 1640 medium containing 11% human AB serum, 30 ng/ml OKT3 Ab, and antibiotics. On day 1, IL-2 was added to a final concentration of 180 IU/ml. On day 5, the cell culture was changed to fresh medium containing 11% human AB serum and 180 IU/ml of IL-2. The medium was then changed every 3 days. On days 12 to 14, T cells were harvested, counted, and cryopreserved.

Melanoma cell lines 397mel, 397mel/A31, 586mel, 624mel, and 624mel/A31; EBV-transformed B cell lines 586EBV and 1500EBV; and T2 cells were established in our laboratory and cultured in RPMI 1640 medium containing 10% FCS. 586EBV B cells are HLA-A31-positive and 1500EBV B cells are HLA-A33-positive cell lines. The COS-7 cell line was provided by Dr. W. Leonard (National Institutes of Health). The following EBV-transformed cell lines were used as sources of class I molecules: GM3107 (A*0301), BVR (A*1101), SPACH (A*3101), and LWAGS (A*3301). A CIR transfectant, characterized by Dr. Walter Stokus, was used as a source of A*6801. Cells were maintained in vitro by culture in RPMI 1640 medium supplemented with 2 mM L-glutamine and 10% heat-inactivated FCS. Cell cultures were also supplemented with 100 µg/ml of streptomycin (Irvine Scientific, Santa Ana, CA) and 100 U/ml of penicillin (Life Technologies, Grand Island, NY). Large quantities of cells were grown in spinner cultures.

GM-CSF secretion assay

DNA transfection and GM-CSF assays were performed as previously described (15). Briefly, 200 ng of DNA encoding Ags and 50 ng of HLA-A31 DNA were mixed with 2 µl of Lipofectamine in 100 µl of DMEM and incubated at room temperature for 15 to 45 min. The DNA/Lipofectamine mixture was then added to the COS-7 cells (5 x 104) and incubated overnight. The following day, cells were washed twice with DMEM medium. TIL586 was added at a concentration of 1 x 105 cells/well in AIM-V medium containing 120 IU/ml of IL-2. For T cell clones, only 1 to 2 x 104 cells/well were added. After an 18- to 24-h incubation, 100 µl of supernatant was collected, and GM-CSF was measured in a standard ELISA assay (R&D Systems, Minneapolis, MN). For peptide recognition, 586EBV or T2 cells were incubated with peptides at 37°C for 90 min and then washed three times with AIM-V medium containing 120 IU/ml of IL-2. T cells were added and incubated for an additional 18 to 24 h; 100 µl of supernatant was collected for the GM-CSF assay.

Cytotoxicity assays

The cytolytic assay was performed as previously described (7). Briefly, the target cells were labeled with chromium for 90 min. After washing three times, the cells were incubated with peptides at a concentration of 1 µg/ml for 90 min. The cells were washed again, counted, and then mixed with TIL1244, T cell clones, or CTL clone 4 at the indicated E:T cell ratio. Chromium release was measured after 4-h incubation. For titration of ORF3P and TRP197–205 peptides, 586EBV B cells and 1500EBV B cells were incubated with various concentrations of the purified peptide. The percentage of specific lysis was determined from the equation (A - B)/(C - B) x 100, where A is lysis of target cells by TIL1244 and T cell clones in the presence of a peptide, B is spontaneous release from EBV B cells in the presence of the same peptide but in the absence of effector cells, and C is the maximum chromium release.

The peptides were synthesized by a solid phase method using a peptide synthesizer (model AMS 422, Gilson Co., Inc., Worthington, OH). Some peptides were purified by HPLC and had >98% purity. The peptide mass of some peptides was confirmed by mass spectrometric analysis.

Affinity purification of HLA-A molecules

Cells were lysed at a concentration of 108 cells/ml in PBS containing 1% Nonidet P-40 and 1 mM PMSF. The lysates were cleared of debris and nuclei by centifugation at 10,000 x g for 20 min. MHC molecules were then purified by affinity chromatography as previously described (25). Columns of inactivated Sepharose CL4B and protein A-Sepharose were used as precolumns. Lysates were filtered through 0.8- and 0.4-µm filters and then depleted of HLA-B and HLA-C molecules by repeated passage over protein A-Sepharose beads conjugated with the anti-HLA(B,C) Ab B1.23.2 (26). Typically, two to four passages were required for effective depletion. Subsequently, the anti-HLA(A,B,C) Ab W6/32 (27) was used to capture HLA-A molecules.

Independently, both Ab columns were washed with 15 column volumes of 10 mM Tris in 1.0% Nonidet P-40, PBS, and 2 column volumes of PBS containing 0.4% n-octylglucoside. Finally, the class I molecules were eluted with 50 mM diethylamine in 0.15 M NaCl containing 0.4% n-octylglucoside, pH 11.5. A 1/25th volume of 2.0 M Tris, pH 6.8, was added to the eluate to reduce the pH to ~8.0 and then concentrated by centifugation in Centriprep 30 concentrators (Amicon, Beverly, MA) at 2000 rpm. Protein purity, concentration, and effectiveness of depletion steps were monitored by SDS-PAGE.

Class I peptide binding assays

Quantitative assays for the binding of three peptides to soluble MHC class I molecules on the basis of the inhibition of binding of a radiolabeled standard probe peptide to detergent solubilized MHC molecules were conducted as previously described (28). Briefly, purified human class I molecules (5–500 nM) were incubated with 1 to 10 nM 125I-radiolabeled probe peptide, iodinated by the chloramine-T method (29), for 48 h at room temperature in the presence of 1 µM human ß2m (Scripps Laboratories, San Diego, CA) and a mixture of protease inhibitors. The final concentrations of protease inhibitors were 1 mM PMSF, 1.3 nM 1.10 phenanthroline, 73 µM pepstatin A, 8 mM EDTA, and 200 µM N{alpha}-p-tosyl-L-lysine chloromethyl ketone (TLCK). Class I peptide complexes were separated from free peptide by gel filtration on TSK200 columns, and the fraction of bound peptide was calculated as previously described (25). In preliminary experiments, the HLA class I prep was titrated in the presence of fixed amounts of radiolabeled peptides to determine the concentration of class I molecules necessary to bind 10 to 20% of the total radioactivity. All subsequent inhibition and direct binding assays were performed using these class I concentrations. In the inhibition assays, peptide inhibitors were typically tested at concentrations ranging from 120 µg/ml to 1.2 ng/ml. The data were then plotted, and the dose yielding 50% inhibition was measured. Peptides were tested in two to four completely independent experiments. Since under these conditions concentration of label < concentration of MHC and IC50 >= concentration of MHC, the measured IC50 values are reasonable approximations of the true kilodalton values. The radiolabeled probe and standard control peptides used are as follows. The A3CON1 peptide (sequence KVFPYALINK) (30) was used as the radiolabeled probe for the A3, A11, A31, and A*6801 assays. A T7Y analogue of HBVc141–151 (sequence STLPETYVVRR) was used as the radiolabeled probe for the A*3301 assay.

The average IC50 values of A3CON1 for the A3, A11, A31, and A*6801 assays were 11, 6, 18, and 8 nM, respectively. The average IC50 of the HBVc141–151 peptide in the A*3301 assay was 29 nM.

RT-PCR analysis

RNA was extracted from T cells using the Trizol reagent according to manufacturer’s procedure (Life Technologies). T cells (1 x 107) of CTL clones 35 and 38 were used to isolate total RNA. RT-PCR was performed using the One-Step RT-PCR kit from Life Technologies and ßV subfamily-specific primer combined with a CßR primer from the constant region of a TCR as previously described (31). Two hundred nanograms of total RNA was used in a 50-µl RT-PCR reaction. RT-PCR was performed in one cycle of 94°C for 2 min and 50°C for 30 min, followed by 40 cycles of 94°C for 30 s for denature, 62°C for 20 s for annealing, and 72°C for 1 min for extension. The positive control used the constant region primers CßF and CßR. Negative controls used RNA or water instead of cDNA in the PCR reactions. RT-PCR products were resolved on a 1% agarose gel.


    Results
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
Peptide binding to HLA class I molecules of the HLA-A3 superfamily

Based on the structural similarities and sequencing of pools of naturally processed peptides bound on MHC class I molecules, it was recently proposed that a set of HLA-A alleles, including HLA-A3, -A11, -A31, -A33, and -A68, could be grouped into a superfamily or designated the A3-like supertype (28). These HLA class I molecules bind to peptide ligands with hydrophobic anchor residues at position 2 and positively charged residues at the COOH-termini (21, 28) (Table IGo). Two tumor Ag peptides, ORF3P, derived from the gene product of alternative open reading frame of TRP-1, and TRP197–205, derived from the TRP-2 normal coding sequence, were recently identified. Both of these epitopes conformed to the previously described canonical HLA-A31 binding motif (Table IGo). A modified peptide of TRP197–205, TRP197–205K, was also included in Table IGo, as this peptide was also recognized by the HLA-A31-restricted CTL clone 4 when pulsed onto HLA-A31+ EBV B cells. Since these tumor Ag peptides were recognized by HLA-A31-restricted CTLs (16, 20), it was of interest to test whether TRP-1 and TRP-2 could be recognized by CTLs in the context of other HLA alleles, such as HLA-A3, -A11, -A33, and -A68. As the first step, we performed peptide binding assays to determine whether ORF3P, TRP197–205, and TRP197–205K could bind to members of the A3-like family. As shown in Table IIGo, these three peptides were indeed capable of binding to A3, A11, A31, A33, and A68 molecules. The peptide ORF3P bound to all five MHC class I members of the A3-like supertype with relatively high binding affinity. The peptide TRP197–205 exhibited a relatively high binding affinity to HLA-A31, intermediate binding affinity to HLA-A33, and relatively low binding affinity to HLA-A3, -A11, and -A68. Interestingly, the binding affinity of TRP197–205 to HLA-A3 and A11 could be improved significantly by the substitution of Arg with Lys at the C-terminus of the peptide. As shown in Table IIGo, TRP197–205K exhibits a high binding affinity to both HLA-A3 and -A11, approximately 100-fold higher than the parental peptide TRP197–205. Furthermore, this substitution had little or no effect on the binding affinity of the peptide to HLA-A31 and -A33, and only a marginally negative effect on the binding affinity of the peptide to HLA-A68.


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Table I. Peptide binding motifs of the A3-like superfamily and peptides used in this study

 

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Table II. Binding affinity of antigenic peptides to the A3-like superfamily

 
Identification of TILs with reactivity to the TRP-2 peptide

Although many tumor Ags have been identified and their T cell epitopes have been determined (7), it has not been reported that the same T cell epitope peptide can bind to different MHC alleles in the superfamily and still be recognized by the corresponding CTL. To test this possibility, we collected five TILs isolated from patients expressing HLA-A3, six TILs from patients expressing HLA-A11, and two TILs from patients expressing HLA-A33 and grew them in RPMI 1640 medium with 10% human AB serum and 6000 IU/ml of IL-2. After 1 wk, these TILs were tested for recognition of ORF3P and TRP197–205 pulsed on HLA-A3+, -A11+, and -A33+ EBV B cells, respectively. No T cell recognition was found from TILs isolated from patients expressing either HLA-A3 or -A11. Failure to identify HLA-A3- and HLA-A11-restricted TILs that recognize ORF3P or TRP197–205 may be due to lack of true HLA-A3- and HLA-A11-restricted CTL in the bulk TIL populations. However, one of two HLA-A33-restricted TILs, TIL1244, was found to recognize the same TRP197–205 peptide in the context of HLA-A33 (Table IIIGo). The phenotype of HLA-A33+ 1500EBV was confirmed by FACS analysis. 1500EBV stained positive with anti-HLA-A33 Ab, but negative with anti-HLA-A31 Ab. By contrast, 586mel and 586EBV were positive for HLA-A31 and negative for HLA-A33 (data not shown), suggesting that HLA-A31 and -A33 molecules can be distinguished by mAbs.


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Table III. Screening of TILs with reactivity to TRP-1 or TRP-2 peptides1

 
T cell recognition of the TRP-2 peptide in the context of HLA-A31 and -A33

Since TRP197–205 is a good HLA-A31 binder (Table IIGo), we next tested whether the HLA-A33-restricted TIL1244 was also capable of recognizing the A31/peptide complex. To this end, ORF3P and TRP197–205 were pulsed onto HLA-A31+ 586EBV, HLA-A33+ 1500EBV, and T2 cells, respectively, and evaluated for T cell recognition by measuring GM-CSF release. TIL1244 recognized both HLA-A31+ and HLA-A33+ EBV B cells pulsed with the TRP197–205 peptide, but not T2 cells pulsed with the TRP197–205 peptide or HLA-A31+ or HLA-A33+ EBV B cells pulsed with the ORF3P peptide (Fig. 1Go). TIL1244 also recognized the modified peptideTRP197–205K as effectively as the parental peptide. In contrast, CTL clone 4, which recognized the TRP197–205 peptide pulsed onto HLA-A31+ EBV B cells, did not respond to the TRP197–205 and TRP197–205K peptides presented by HLA-A33+ EBV B cells (Fig. 1Go).



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FIGURE 1. Recognition of various target cells pulsed with antigenic peptides by TIL1244 and CTL clone 4 derived from TIL586. TIL1244 and T cell clone 4 were grown in AIM-V medium containing 6000 IU/ml IL-2. GM-CSF secretion by TIL1244 (left) and CTL clone 4 (right) was measured after coculture with T2, 586EBV, and 1500EBV alone or pulsed with ORF3P or TRP197–205 peptide.

 
To confirm this observation, we transfected COS-7 with either HLA-A31 or HLA-A33 combined with either TRP-1 or TRP-2 cDNA. As expected, TIL1244 recognized COS-7 transfected with HLA-A33 and TRP-2 cDNA, but not COS-7 transfected with HLA-A33 and TRP-1 cDNA (Fig. 2GoA). Interestingly, TIL1244 also recognized COS-7 transfected with HLA-A31 plus TRP-2. However, TIL1244 did not recognize COS-7 transfected with HLA-A31 plus TRP-1 or with HLA-A31 alone (Fig. 2GoA). These results demonstrated that TIL1244 were capable of recognizing the TRP197–205 peptide presented by either HLA-A31 or HLA-A33 molecules.



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FIGURE 2. Recognition of TRP-2 as a tumor Ag by TIL1244 in the context of HLA-A31 and -A33. A, GM-CSF release by TIL1244 was measured after coculture either with COS-7 cotransfected with the HLA-A31 cDNA along with genes encoding TRP-1 or TRP-2 or with COS-7 cotransfected with the HLA-A33 cDNA plus TRP-1 or TRP-2 genes. COS-7 cells transfected the HLA-A31 or -A33 alone were used as controls. B, GM-CSF release by TIL1244 (solid bar) and CTL clone 4 (hatched bar) was measured after coculture with various tumor cell lines. 397mel/A31 and 624mel/A31 were generated after transfection of HLA-A31 cDNA into 397mel or 624mel. 624mel/A33 was generated from 624mel transfected with the HLA-A33 cDNA. These transfectants were grown and selected in G418-containing complete medium.

 
CTLs generated in vitro in many cases are capable of recognizing a peptide pulsed onto EBV B cells, but fail to recognize tumor cells (7). Therefore, it was of interest to test whether TIL1244 was capable of recognizing HLA-A31+ tumor lines. The experimental results in Figure 2GoB indicated that 586mel (A31+ TRP-2+), 397mel/A31 (A31+, TRP-2+), and 624mel/A31 (A31+, TRP-2+) all stimulated GM-CSF release from TIL1244, while 397mel (A31-, TRP-2+) and 624mel (A31-, TRP-2+) failed to stimulate cytokine release from TIL1244. In addition, 624mel transfected with HLA-A33 was shown to confer recognition by TIL1244. Taken together, these results indicated that TIL1244 is also capable of recognizing tumor cells expressing TRP-2 and either HLA-A31 or HLA-A33.

T cell clones derived from TIL1244

Since TIL1244 is a bulk T cell line, recognition of TRP197–205 by TIL1244 in the context of HLA-A31 and -A33 could be due to the coexistence of different subsets of T cell populations: one recognizing TRP-2 in the context of HLA-A31 and the other recognizing TRP-2 in the context of HLA-A33. To test this possibility, T cell clones were generated by limiting dilution. Of 136 clones tested, 50 clones (36%) were found to recognize 586EBV B cells and 1500EBV pulsed with TRP197–205, but not EBV B cells alone. Four CTL clones were further expanded using the anti-OKT3 rapid expansion method and tested for their recognition of either HLA-A31+ or HLA-A33+ tumor cells. All four CTL clones recognized 586mel, 397mel/A31, 624mel/A31, and 624/A33 (data not shown). The cytolytic activity of TIL1244 and its derived CTL clones against different targets was also tested at different E:T ratios. As shown in Figure 3Go, A and B, TIL1244 efficiently lysed 586mel, TRP197–205-pulsed 586EBV, and 1500EBV B cells, while no lysis was observed in the case of 397mel or T2 cells pulsed with TRP197–205. Similar results were obtained when the CTL clones 35 and 38 were used as effector cells (Fig. 3Go, C and D). The clonality of CTL clones 35 and 38 was confirmed by RT-PCR analysis using TCR ßV subfamily-specific primers (31). Only one DNA band of about 600 bp was detected from RT-PCR products amplified with a ßV16-specific primer combined with a CßR primer from the constant region of TCR, while no DNA band was observed from the RT-PCR reactions using other ßV-specific primers combined with the CßR primer (Fig. 4Go). These results suggested that a single TCR receptor can recognize the same peptide presented by either HLA-A31 or -A33 molecules.



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FIGURE 3. Lysis of the target cells by TIL1244 and its CTL clones at different E:T ratios. A, 586mel cells were lysed by TIL1244, but 397mel cells were not lysed by TIL1244 at different E:T ratios. B, EBV B cells were labeled with chromium. TRP197–205 was then pulsed on the chromium-labeled 1500EBV, 586EBV, and T2 cells for 90 min. After peptide incubation, cytolysis by TIL1244 was determined in a 4-h chromium release assay. Unpulsed 586EBV and 1500EBV B cells were used for negative controls. C and D, Cytolysis of the target cells was determined by CTL clones 35 and 38, which were derived from TIL1244. T2 pulsed with TRP197–205 peptide, 586EBV, and 1500EBV pulsed with or without the ORF3P were used for the negative and specificity controls as indicated.

 


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FIGURE 4. RT-PCR amplification of TCR ßV genes from CTL clones 35 and 38. Total RNA was extracted from CTL clones 35 and 38, respectively. RT-PCR was performed in the presence of ßV subfamily-specific primers and CßR. The positive control (P) is a 200-bp gene product amplified by CßF (a constant region forward primer) and CßR (a constant region reverse primer). Negative controls (N) were either PCR reactions using RNA as templates instead of cDNA or PCR reactions without RNA templates. M is a 1-kb DNA marker purchased from Life Technologies.

 
Characterization of T cell recognition

From the experiments presented in Figure 3Go, it was evident that lysis of 1500EBV pulsed with TRP197–205 peptide by TIL1244 and CTL clones 35 and 38 was higher than that of 586EBV pulsed with the same peptide. To further analyze the differential recognition of target cells by both TIL1244 and its CTL clones, peptide titration experiments were performed. As shown in Figure 5GoA, there was a significant difference in the peptide concentrations required to obtain similar cytokine release from the TIL1244 stimulated by different APCs. The T cell response could be detected down to 1 ng/ml of TRP197–205 and plateaued at 1 µg/ml in the case of 1500EBVB cells. However, at least a 10-fold higher peptide concentration was required for detectable responses when the same peptide was pulsed onto 586EBV B cells. The T cell response in this case did not reach a plateau at a concentration of 1 µg/ml of the peptide. Although the poor response of TIL1244 to the TRP197–205 peptide when loaded on HLA-A31+ 586EBV could result from the difference in peptide binding affinity to HLA-A31 molecules on 586EBV vs that to HLA-A33 molecules on 1500EBV, the peptide binding assay in Table IIGo ruled out this possibility. In contrast, the response of HLA-A31-restricted CTL clone 4 to the TRP197–205 peptide reached a plateau at 1 ng/ml when pulsed onto HLA-A31+ 586EBV B cells, and no recognition was observed when the same peptide was pulsed onto HLA-A33+ 1500EBV B cells (Fig. 5GoB). Furthermore, both 586EBV and 1500EBV B cells expressed a comparable level of MHC class I molecules (HLA-A31 or -A33) on the cell surface (data not shown). These results indicated that the differential recognition of the same peptide on either HLA-A31 or -A33 by TIL1244 might be due to the difference in the TCR affinity of TIL1244 to A31/peptide compared with that to A33/peptide. Consistent with this hypothesis were results obtained in experiments in which various peptide concentrations were evaluated (Fig. 6Go), strongly suggesting that TCR affinity rather than MHC/peptide affinity is responsible for the observed patterns of T cell recognition and target lysis.



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FIGURE 5. Differential recognition of TRP197–205 by TIL1244 and CTL clone 4. 586EBV (A31+), 1500EBV (A33+), and T2 cells were pulsed with the TRP197–205 peptide at various concentrations for 90 min. T2 pulsed with TRP197–205 peptide was used as a specificity control. GM-CSF release by TIL1244 (A) and CTL clone 4 (B) was determined after coincubation with these target cells. No GM-CSF release was detected from the negative controls 586EBV and 1500EBV B cells pulsed with ORF3P peptide or T2 pulsed with TRP197–205 peptide.

 


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FIGURE 6. Sensitization of the target cells for lysis by CTL at different peptide concentrations. 586EBV and 1500EBV B cells were incubated with TRP197–205 at various concentrations for 90 min. 586EBV and 1500EBV B cells pulsed with ORF3P peptide were used as the negative controls. Following washes, the cytolytic activity of CTL at an E:T ratio of 10:1 was measured after a 4-h incubation of T cells with target cells.

 

    Discussion
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
In this study we demonstrate that the antigenic peptides derived from TRP-1 and TRP-2 are capable of binding to all members of the A3-like supertype. Although the majority of antigenic peptides identified from melanoma Ags to date have intermediate or relatively low binding affinity to MHC molecules (6), the ORF3P peptide has a relatively high binding affinity to all alleles tested. By contrast, the TRP197–205 peptide has different affinities, ranging from high to low, for the five alleles. Interestingly, ORF3P and TRP197–205 display identical or similar binding to HLA-A31 and -A33, but their binding affinities to HLA-A3, -A11, and -A68 are very different, suggesting that secondary anchor residues play an important role in determining the binding affinity of this particular peptide to A3 supertype MHC molecules.

The binding affinity of TRP197–205 to HLA-A3 and -A11 can be improved by substituting Arg with Lys. It was reported that the improved binding affinity of the modified peptides by substitution of anchor residues with optimal or preferred residues enhanced the immunogenicity of peptides in vitro (32). However, the correlation between the peptide binding affinity and immunogenicity in vivo remains to be established. Recent reports suggest that peptide binding affinity for MHC class I molecules is a major factor, but not the sole factor, in determining immunogenicity (32, 33). Other factors, such as peptide liberation, TAP transport, and TCR repertoire for a particular peptide, also affect the immunogenicity of peptide in vivo (33). The existence of immunodominant peptides may affect the immunogenicity of the other peptides, such as a cryptic peptide (33, 34). For this reason, peptide-based vaccines may have advantages over other types of vaccines because one should be able to direct the immune response toward cryptic peptides in cases where an immunodominant epitope suppresses cryptic peptides to elicit an immune response (34).

Direct peptide binding assay has allowed the definition of several HLA supertypes initially suggested by HLA structural similarity and peptide binding motifs (22, 28). However, these studies did not demonstrate that these MHC/peptide complexes can be recognized by CTL. It was previously reported that a viral peptide of HBcAg from hepatitis B virus was capable of binding to HLA-A31 and -A68 and was recognized by their corresponding CTLs isolated from a single patient (35). To our knowledge, this is the first demonstration that a self cancer peptide, TRP197–205, not only binds to all members of the HLA-A3 superfamily, as discussed above, but is also recognized by the HLA-A31-restricted CTL clone 4 and the HLA-A33-restricted CTL derived from different patients. Furthermore, it was found that TIL1244 was capable of recognizing the TRP197–205 peptide presented by either HLA-A31 or -A33 molecules. These studies suggest that self Ags may be used to treat patients expressing HLA-A31 or HLA-A33 and perhaps other members of the HLA-A3-like supertype. Since the modified peptide TRP197–205K exhibits better binding to HLA-A3 and -A11, and still can be recognized by the HLA-A31-restricted CTL clone when pulsed onto A31+ EBV B cells as well as by TIL1244 when presented by both HLA-A31 and -A33 EBV B cells, this peptide may be a good candidate for a cancer vaccine for the treatment of patients expressing HLA-A3, -A11, -A31, and -A33. Generation of HLA-A3- or HLA-A11-restricted CTLs that are capable of recognizing these peptides derived from TRP-1 and TRP-2 is important for our understanding of T cell recognition of peptides presented by members of the A3 superfamily. These studies are currently under investigation.

Although the TRP197–205 peptide bound to HLA-A31 10 times better than to HLA-A33 (Table IIGo), recognition of the peptide/HLA-A31 complex by TIL1244 and its T cell clones was 10 times worse than that of the peptide/HLA-A33 complex (Figs. 5Go and 6Go), strongly suggesting that the TCR receptor of TIL1244 or its T cell clones has a low avidity for peptide/HLA-A31 complexes. Nonetheless, TIL1244 strongly recognized both tumor cells expressing TRP-2 and HLA-A31 and tumor cells expressing TRP-2 and HLA-A33 (Fig. 2GoB). This may be due to high expression levels of TRP-2 in tumor cells (16), leading to a high density of the TRP-2 peptide/HLA-A31 or HLA-A33 complexes on the surface of tumor cells. T cell clones with differential TCR avidity for antigenic peptide/MHC complexes have indeed recently been described (36). Fully understanding the relationship between TCR avidity and the number of MHC/peptides required for optimal TCR engagement will have important implications for the treatment of patients with cancer or autoimmune disease.


    Acknowledgments
 
We thank Dr. Soo-Young Yang for the HLA-A33 cDNA, Dr. S. Topalian for cell lines, Drs. Y. Kawakami and P. Robbins for critical reading of the manuscript, and A. Mixon and E. Fitzgerald for FACS analysis.


    Footnotes
 
1 This work was supported in part by federal funds from the National Institute for Allergy and Infectious Diseases, National Institutes of Health, under Contract NO1-A1-45241 and in part by the Naval Medical Research and Development Command Work Unit (Grant 63002A). Back

2 Address correspondence and reprint requests to Dr. Rong-Fu Wang, Surgery Branch, National Cancer Institute, Building 10, Room 2B42, National Institutes of Health, Bethesda, MD 20892. E-mail address: Back

3 Abbreviations used in this paper: TRP, tyrosinase-related protein; TIL, tumor-infiltrating lymphocyte; ORF3P, open reading frame peptide-3; GM-CSF, granulocyte-macrophage colony-stimulating factor. Back

Received for publication May 21, 1997. Accepted for publication October 6, 1997.


    References
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 

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