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The Journal of Immunology, 2006, 176: 4083-4093.
Copyright © 2006 by The American Association of Immunologists

Rapid Demethylation of the IFN-{gamma} Gene Occurs in Memory but Not Naive CD8 T Cells1

Ellen N. Kersh*, David R. Fitzpatrick{dagger}, Kaja Murali-Krishna{ddagger}, John Shires*, Samuel H. Speck*, Jeremy M. Boss* and Rafi Ahmed2,*

* Emory Vaccine Center and Department of Microbiology and Immunology, Emory University School of Medicine, Atlanta, GA 30322; {dagger} Amgen, Seattle, WA 98119; and {ddagger} Department of Immunology, University of Washington, Seattle, WA 98195

DNA methylation is an epigenetic mechanism of gene regulation. We have determined that specific modifications in DNA methylation at the IFN-{gamma} locus occur during memory CD8 T cell differentiation in vivo. Expression of the antiviral cytokine IFN-{gamma} in CD8 T cells is highly developmental stage specific. Most naive cells must divide before they express IFN-{gamma}, while memory cells vigorously express IFN-{gamma} before cell division. Ag-specific CD8 T cells were obtained during viral infection of mice and examined directly ex vivo. Naive cells had an IFN-{gamma} locus with extensive methylation at three specific CpG sites. An inhibitor of methylation increased the amount of IFN-{gamma} in naive cells, indicating that methylation contributes to the slow and meager production of IFN-{gamma}. Effectors were unmethylated and produced large amounts of IFN-{gamma}. Interestingly, while memory cells were also able to produce large amounts of IFN-{gamma}, the gene was partially methylated at the three CpG sites. Within 5 h of antigenic stimulation, however, the gene was rapidly demethylated in memory cells. This was independent of DNA synthesis and cell division, suggesting a yet unidentified demethylase. Rapid demethylation of the IFN-{gamma} promoter by an enzymatic factor only in memory cells would be a novel mechanism of differential gene regulation. This differentiation stage-specific mechanism reflects a basic immunologic principle: naive cells need to expand before becoming an effective defense factor, whereas memory cells with already increased precursor frequency can rapidly mount effector functions to eliminate reinfecting pathogens in a strictly Ag-dependent fashion.




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