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The Journal of Immunology, 2006, 176: 6690-6701.
Copyright © 2006 by The American Association of Immunologists

Degeneracy and Repertoire of the Human HIV-1 Gag p1777–85 CTL Response1

June Kan-Mitchell2,*, Melissa Bajcz*, Keri L. Schaubert*, David A. Price{dagger}, Jason M. Brenchley{dagger}, Tedi E. Asher{dagger}, Daniel C. Douek{dagger}, Hwee L. Ng{ddagger}, Otto O. Yang{ddagger}, Charles R. Rinaldo, Jr.§, Jose Miguel Benito, Brygida Bisikirska*, Ramakrishna Hegde*, Franco M. Marincola||, César Boggiano#, Dianne Wilson#, Judith Abrams*, Sylvie E. Blondelle# and Darcy B. Wilson#,**

* Karmanos Cancer Institute, Wayne State University School of Medicine, Detroit, MI 48201; {dagger} Human Immunology Section, Vaccine Research Center, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD 20892; {ddagger} Departments of Medicine and Microbiology, Immunology, and Molecular Genetics, University of California Los Angeles, Los Angeles, CA 90095; § University of Pittsburgh Graduate School of Public Health, Pittsburgh, PA 15261; Department of Molecular Biology, Hospital Carlos III, Madrid, Spain; || Immunogenetics Section, Department of Transfusion Medicine, National Institutes of Health, Bethesda, MD 20892; # Torrey Pines Institute for Molecular Studies, San Diego, CA 92121; and ** Mixture Sciences, Inc., San Diego, CA 92121

CD8+ CTL responses are important for the control of HIV-1 infection. The immunodominant HLA-A2-restricted Gag epitope, SLYNTVATL (SL9), is considered to be a poor immunogen because reactivity to it is rare in acute infection despite its paradoxical dominance in patients with chronic infection. We have previously reported SL9 to be a help-independent epitope in that it primes highly activated CTLs ex vivo from CD8+ T cells of seronegative healthy donors. These CTLs produce sufficient cytokines for extended autocrine proliferation but are sensitive to activation-induced cell death, which may cause them to be eliminated by a proinflammatory cytokine storm. Here we identified an agonist variant of the SL9 peptide, p41 (SLYNTVAAL), by screening a large synthetic combinatorial nonapeptide library with ex vivo-primed SL9-specific T cells. p41 invariably immunized SL9-cross-reactive CTLs from other donors ex vivo and H-2Db beta2m double knockout mice expressing a chimeric HLA-A*0201/H2-Db MHC class I molecule. Parallel human T cell cultures showed p41-specific CTLs to be less fastidious than SL9-CTLs in the level of costimulation required from APCs and the need for exogenous IL-2 to proliferate (help dependent). TCR sequencing revealed that the same clonotype can develop into either help-independent or help-dependent CTLs depending on the peptide used to activate the precursor CD8+ T cells. Although Ag-experienced SL9-T cells from two patients were also sensitive to IL-2-mediated cell death upon restimulation in vitro, the loss of SL9 T cells was minimized with p41. This study suggests that agonist sequences can replace aberrantly immunogenic native epitopes for the rational design of vaccines targeting HIV-1.




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