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* Lymphocyte Biology Section, Division of Rheumatology, Immunology, and Allergy, Department of Medicine, Brigham and Womens Hospital and Harvard Medical School, Boston, MA 02115;
Department of Molecular Biology and Skaggs Institute of Chemical Biology, The Scripps Research Institute, La Jolla, CA 92037; and
Department of Microbiology and Immunology, School of Microbiological, Immunological, and Virological Sciences, University of Newcastle upon Tyne, The Medical School, Newcastle upon Tyne, United Kingdom

TCR can recognize peptides presented by MHC molecules or
lipids and glycolipids presented by CD1 proteins. Whereas the
structural basis for peptide/MHC recognition is now clearly understood,
it is not known how the TCR can interact with such disparate molecules
as lipids. Recently, we demonstrated that the 
TCR confers
specificity for both the lipid Ag and CD1 isoform restriction,
indicating that the TCR is likely to recognize a lipid/CD1 complex. We
hypothesized that lipids may bind to CD1 via their hydrophobic alkyl
and acyl chains, exposing the hydrophilic sugar, phosphate, and other
polar functions for interaction with the TCR
complementarity-determining regions (CDRs). To test this model, we
mutated the residues in the CDR3 region of the DN1 TCR
-chain that
were predicted to project between the CD1b
helixes in a model of
the TCR/CD1 complex. In addition, we tested the requirement for the
negatively charged and polar functions of mycolic acid for Ag
recognition. Our findings indicate that the CDR loops of the TCR form
the Ag recognition domain of CD1-restricted TCRs and suggest that the
hydrophilic domains of a lipid Ag can form a combinatorial epitope
recognized by the TCR.
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