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The Journal of Immunology, 2000, 165: 4446-4452.
Copyright © 2000 by The American Association of Immunologists

Identification and Characterization of a ß Proteasome Subunit Cluster in the Japanese Pufferfish (Fugu rubripes)1

Melody S. Clark2,*, Pierre Pontarotti{dagger}, André Gilles{ddagger}, Alison Kelly§ and Greg Elgar*

* Fugu Genomics, HGMP Resource Centre, Wellcome Genome Campus, Hinxton, Cambridge, United Kingdom; {dagger} Institut de Cancérologie et d’Immunologie de Marseille, Institut National de la Santé et de la Recherche Médicale Unité 119, Marseille, France; {ddagger} UPRES Biodiversité 2202, Laboratoire d’hydrobiologie, Université de Provence, Marseille, France; and § Department of Medicine, Addenbrooke’s Hospital, Cambridge, United Kingdom

The low molecular mass polypeptide (LMP2, LMP7, and MECL-1) genes code for ß-type subunits of the proteasome, a multimeric complex that degrades proteins into peptides as part of the MHC class I-mediated Ag-presenting pathway. These gene products are up-regulated in response to infection by IFN-{gamma} and replace the corresponding constitutively expressed subunits (X, Y, and Z) during the immune response. In humans, the LMP2 and LMP7 genes both reside within the class II region of the MHC (6p21.3), while MECL-1 is located at 16q22.1. In the present study, we have identified all three IFN-{gamma}-regulated ß-type proteasome subunits in Fugu, which are present as a cluster within the Fugu MHC class I region. We show that in this species, LMP7, LMP2, and MECL-1 are linked. Also within this cluster is an LMP2-like subunit (which seems specific to all teleosts tested to date) and a closely linked LMP7 pseudogene, indicating that within Fugu and potentially other teleosts, there has been an additional regional duplication involving these genes.




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